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The map label for this gene is ppdD [C]

Identifier: 93005102

GI number: 93005102

Start: 321548

End: 322012

Strand: Direct

Name: ppdD [C]

Synonym: Pcryo_0271

Alternate gene names: 93005102

Gene position: 321548-322012 (Clockwise)

Preceding gene: 93005101

Following gene: 93005105

Centisome position: 10.51

GC content: 40.43

Gene sequence:

>465_bases
ATGACAGCCATGACTATGAGCGAAACGACCCAAAATCGTCATTTAGTGACTCAATCTGGCTTTACACTGATTGAATTGTT
AATTGTCGTGGCTATCATCGGAATATTAGCTGCGATATCTACACTCAGTTATCAGACTCAGATTAGAAAAACACATATAA
TGATAGTTTATAAAGAGATAAATCACTTTCGTCTGCCATATCAAACCTTAATAGCAGAGGGTGCAGGAGTAATAGGGTTC
AGTCCAAGTGGACTCAATATCCCAGCACAGACTAAATATTGTCAGTTTAGTGTCACTGCACCTGCTGTAAGTGGAGTTAC
TACTGACGCAGTTAAATGCACTATTCAAAACTTACCCTATATAGAAGGGCAGTCAATCAGTCTTGACCGAGCTGCTAATG
GTTCATGGAAGTGCCGGGCATCCGAAGGTATTCCAACAGCTTATTTACCGCGAACTTGTCAATAA

Upstream 100 bases:

>100_bases
ATGGTTATCTCTTATTTTGATTAGATTCGCCTTTTTTTATTATATTTAGGGCAATGATGGCATAAGCTGTGCACTATCCA
AGTAACCTTAATAATATGAT

Downstream 100 bases:

>100_bases
AGTAATGTAATTTATCATAGATAATATCTGATAAAAAACCACCTATTAGCATATCGCTATTAGATGGTTTTTCATTATTT
TAATATATTGAGCGGTTTTA

Product: putative pilin protein PilA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTAMTMSETTQNRHLVTQSGFTLIELLIVVAIIGILAAISTLSYQTQIRKTHIMIVYKEINHFRLPYQTLIAEGAGVIGF
SPSGLNIPAQTKYCQFSVTAPAVSGVTTDAVKCTIQNLPYIEGQSISLDRAANGSWKCRASEGIPTAYLPRTCQ

Sequences:

>Translated_154_residues
MTAMTMSETTQNRHLVTQSGFTLIELLIVVAIIGILAAISTLSYQTQIRKTHIMIVYKEINHFRLPYQTLIAEGAGVIGF
SPSGLNIPAQTKYCQFSVTAPAVSGVTTDAVKCTIQNLPYIEGQSISLDRAANGSWKCRASEGIPTAYLPRTCQ
>Mature_153_residues
TAMTMSETTQNRHLVTQSGFTLIELLIVVAIIGILAAISTLSYQTQIRKTHIMIVYKEINHFRLPYQTLIAEGAGVIGFS
PSGLNIPAQTKYCQFSVTAPAVSGVTTDAVKCTIQNLPYIEGQSISLDRAANGSWKCRASEGIPTAYLPRTCQ

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16739; Mature: 16607

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMTMSETTQNRHLVTQSGFTLIELLIVVAIIGILAAISTLSYQTQIRKTHIMIVYKEI
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEC
NHFRLPYQTLIAEGAGVIGFSPSGLNIPAQTKYCQFSVTAPAVSGVTTDAVKCTIQNLPY
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEEECCCCC
IEGQSISLDRAANGSWKCRASEGIPTAYLPRTCQ
CCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TAMTMSETTQNRHLVTQSGFTLIELLIVVAIIGILAAISTLSYQTQIRKTHIMIVYKEI
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEC
NHFRLPYQTLIAEGAGVIGFSPSGLNIPAQTKYCQFSVTAPAVSGVTTDAVKCTIQNLPY
CCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEEECCCCC
IEGQSISLDRAANGSWKCRASEGIPTAYLPRTCQ
CCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA