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The map label for this gene is ppdD [C]

Identifier: 93005099

GI number: 93005099

Start: 318945

End: 319418

Strand: Direct

Name: ppdD [C]

Synonym: Pcryo_0268

Alternate gene names: 93005099

Gene position: 318945-319418 (Clockwise)

Preceding gene: 93005098

Following gene: 93005100

Centisome position: 10.42

GC content: 37.55

Gene sequence:

>474_bases
ATGTCATATTTTAATGAATTATCTAAAAAAATATCAAAAAATGATCAGGGCTTTACGCTGATTGAGATGATGATAGTGGT
TGCCATCATCGGCATTTTGGCAGCAATTGCTTATCCTAGTTATCAAAACTACGTTATTAAAACCAAACGTACTGACATGA
TGAGTGAGATGCAGAACATTGCTTCAGAGATTGAAAGCCGCAAGCTAGCACAAGGTAGCTATAGTGCTATTAGTGCAAGT
GTCAAAACAGATTTTGCTACCGCCTATCCAAGGCAGGGCACTCAGCTATATGATATAACTATCAATCCAATAACATTAAC
GCCTCCTGATAATATATTGACCAATAAATGGATAATTACAGCCACGCCAAATACGGGGATGCAAATGGTAGGTGATGGTA
ATCTTAGTCTGAATTATCAAGGTGTGAAATGTCGAGTCAGTATCTGTGGTACTGGTGAAGAATGGACAAAATAA

Upstream 100 bases:

>100_bases
ATATTTTGATGATAAATAGTACGGGTGTGAAATGTAAAAGTAAGGATAGGGCAGTCACCATTGCTTCTATCAATTGCGGC
ACTGGAAATGAGGACTGGTA

Downstream 100 bases:

>100_bases
GATAAATAAAATAGAAAAGTTGAGAATTTGACAAAAAACGTCAGTTATCTTTACCTTTCGTGACTCATGATAGGCAGACT
GACAATTTTTAGTGGCTTGG

Product: putative pilin protein PilE

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSYFNELSKKISKNDQGFTLIEMMIVVAIIGILAAIAYPSYQNYVIKTKRTDMMSEMQNIASEIESRKLAQGSYSAISAS
VKTDFATAYPRQGTQLYDITINPITLTPPDNILTNKWIITATPNTGMQMVGDGNLSLNYQGVKCRVSICGTGEEWTK

Sequences:

>Translated_157_residues
MSYFNELSKKISKNDQGFTLIEMMIVVAIIGILAAIAYPSYQNYVIKTKRTDMMSEMQNIASEIESRKLAQGSYSAISAS
VKTDFATAYPRQGTQLYDITINPITLTPPDNILTNKWIITATPNTGMQMVGDGNLSLNYQGVKCRVSICGTGEEWTK
>Mature_156_residues
SYFNELSKKISKNDQGFTLIEMMIVVAIIGILAAIAYPSYQNYVIKTKRTDMMSEMQNIASEIESRKLAQGSYSAISASV
KTDFATAYPRQGTQLYDITINPITLTPPDNILTNKWIITATPNTGMQMVGDGNLSLNYQGVKCRVSICGTGEEWTK

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17393; Mature: 17262

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYFNELSKKISKNDQGFTLIEMMIVVAIIGILAAIAYPSYQNYVIKTKRTDMMSEMQNI
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
ASEIESRKLAQGSYSAISASVKTDFATAYPRQGTQLYDITINPITLTPPDNILTNKWIIT
HHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCEEEE
ATPNTGMQMVGDGNLSLNYQGVKCRVSICGTGEEWTK
ECCCCCEEEEECCCEEEEECCEEEEEEEECCCHHCCC
>Mature Secondary Structure 
SYFNELSKKISKNDQGFTLIEMMIVVAIIGILAAIAYPSYQNYVIKTKRTDMMSEMQNI
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
ASEIESRKLAQGSYSAISASVKTDFATAYPRQGTQLYDITINPITLTPPDNILTNKWIIT
HHHHHHHHHCCCCCHHHHHHHHCCHHHCCCCCCCEEEEEEECCEEECCCCCCCCCCEEEE
ATPNTGMQMVGDGNLSLNYQGVKCRVSICGTGEEWTK
ECCCCCEEEEECCCEEEEECCEEEEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA