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The map label for this gene is ppdD [C]

Identifier: 93005098

GI number: 93005098

Start: 318397

End: 318945

Strand: Direct

Name: ppdD [C]

Synonym: Pcryo_0267

Alternate gene names: 93005098

Gene position: 318397-318945 (Clockwise)

Preceding gene: 93005097

Following gene: 93005099

Centisome position: 10.41

GC content: 41.53

Gene sequence:

>549_bases
ATGAATATGAAGACGTTAAAACAACAAGTAGGCTTTACGCTTATAGAGCTGATGATAGTCATCATAATCGTGGCTATCTT
AGCGGCGATTGCGATACCGTCTTATCGGCAGTTTGTGGTGCGTAATGCTGAATCACAAGCACAGGCACGAATGCAAGAGC
TTGATATAGAGCTGAACCGCTGGCGTGCTAGTGCTTTAACTTATAAAGGCTTTAAGCCCAAAAAAATAGCAAGTAATGGC
GATATCAGCTATGCATATGATGCAACTGACAATAAAACTATCTATGTCCCTAAAGGTAGCGATAGCACGAATTACCGTTA
TATGATTGCGTTAGTAGATGGCAGTACAGGTAACACCTTAGCTCCTACAGGCACTGGTTATTCCACCGCAGGCAGCTCAT
GGCGCATGTTAGCAGAGCCAAATACTTCATTTAAAAATTCAAATGCTCATATTTTGATGATAAATAGTACGGGTGTGAAA
TGTAAAAGTAAGGATAGGGCAGTCACCATTGCTTCTATCAATTGCGGCACTGGAAATGAGGACTGGTAA

Upstream 100 bases:

>100_bases
TAGCAGCATTGGTAATGGTACAGCGCCTGATATGATATTTAACGAGCGCTTTACGCTACAGCCGAAAACGTGGTACGAAG
TAGACTGATAGGATGGTCGT

Downstream 100 bases:

>100_bases
TGTCATATTTTAATGAATTATCTAAAAAAATATCAAAAAATGATCAGGGCTTTACGCTGATTGAGATGATGATAGTGGTT
GCCATCATCGGCATTTTGGC

Product: putative pilin protein PilE

Products: NA

Alternate protein names: Pilin Protein PilE; Pilus Assembly Protein PilE; ComE Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNMKTLKQQVGFTLIELMIVIIIVAILAAIAIPSYRQFVVRNAESQAQARMQELDIELNRWRASALTYKGFKPKKIASNG
DISYAYDATDNKTIYVPKGSDSTNYRYMIALVDGSTGNTLAPTGTGYSTAGSSWRMLAEPNTSFKNSNAHILMINSTGVK
CKSKDRAVTIASINCGTGNEDW

Sequences:

>Translated_182_residues
MNMKTLKQQVGFTLIELMIVIIIVAILAAIAIPSYRQFVVRNAESQAQARMQELDIELNRWRASALTYKGFKPKKIASNG
DISYAYDATDNKTIYVPKGSDSTNYRYMIALVDGSTGNTLAPTGTGYSTAGSSWRMLAEPNTSFKNSNAHILMINSTGVK
CKSKDRAVTIASINCGTGNEDW
>Mature_182_residues
MNMKTLKQQVGFTLIELMIVIIIVAILAAIAIPSYRQFVVRNAESQAQARMQELDIELNRWRASALTYKGFKPKKIASNG
DISYAYDATDNKTIYVPKGSDSTNYRYMIALVDGSTGNTLAPTGTGYSTAGSSWRMLAEPNTSFKNSNAHILMINSTGVK
CKSKDRAVTIASINCGTGNEDW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19959; Mature: 19959

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKTLKQQVGFTLIELMIVIIIVAILAAIAIPSYRQFVVRNAESQAQARMQELDIELNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCEEEE
WRASALTYKGFKPKKIASNGDISYAYDATDNKTIYVPKGSDSTNYRYMIALVDGSTGNTL
EEEEEEEECCCCCCEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCC
APTGTGYSTAGSSWRMLAEPNTSFKNSNAHILMINSTGVKCKSKDRAVTIASINCGTGNE
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEECCCCCEEEEEEEECCCCCC
DW
CC
>Mature Secondary Structure
MNMKTLKQQVGFTLIELMIVIIIVAILAAIAIPSYRQFVVRNAESQAQARMQELDIELNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCEEEE
WRASALTYKGFKPKKIASNGDISYAYDATDNKTIYVPKGSDSTNYRYMIALVDGSTGNTL
EEEEEEEECCCCCCEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCC
APTGTGYSTAGSSWRMLAEPNTSFKNSNAHILMINSTGVKCKSKDRAVTIASINCGTGNE
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCEECCCCCEEEEEEEECCCCCC
DW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA