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The map label for this gene is yfgC [C]

Identifier: 93005060

GI number: 93005060

Start: 272788

End: 274449

Strand: Direct

Name: yfgC [C]

Synonym: Pcryo_0229

Alternate gene names: 93005060

Gene position: 272788-274449 (Clockwise)

Preceding gene: 93005055

Following gene: 93005063

Centisome position: 8.92

GC content: 46.69

Gene sequence:

>1662_bases
ATGCTTGATAAGCCGCTAATAAATGCACGGAATAAACGTGCTATCACTCACTATGTAAGCGTACAGACAGGGTTATTCTC
TAAGCAGATAAACCATCATCTGTCGCGATCATTTGCAATAAAATTAGCACTGTCAACGATATTATTGGCCTGTACAAGCA
TCGCCTATAGCAAAAGCCAAGCGATGCCATTGAGCTATGATTCATGGCAAACCACTAACACAGAAGAGCTAAGTTTGCCC
AGTTTACGCGGGCAAGGGCTGAGCTTTGATGAGCAATATCAAAATAAATTGCTGGGTGAATGGTCATTAAGAAACATCAA
TGGTCGTGTAAAGATGGAGCATGACCCTTGGATTCAAGAAACGGTCAAAGAACTAACATGGCGGCTCAATGCCCAAGCAC
GCCAGCAAGCACCGCTTGGTTTGGTCATTATCGATAACCCAAGTATTAATGCATTTGCGGCTCCAGGCGGCGTAATTGGT
CTTAATACCGGCACTATATTGGCTGCAAACAGCATGGATGAGCTGGCAAGCGTTGTGGCTCATGAGGTTGCGCACATCAG
TCAGCGTCATTATGAAAGCGGCGCTGATGAGCGCAAAAAAGCCTTGCTGATGCAAATAGGTGGCATGCTCGCCGCGATTG
CTGCATCGACCGTCGATGGTGATGCGGCAGCAGCAGTGATGATGGGTAGCCAAACCGCCACTATGAATAGTAGTATGGCG
TTTAGTCGTAATAATGAACGTGATGCTGATCGGGTCGGTATGCAAATCATGAACCAAGCTGGCTATGACCCACGGGCGAT
GCCGCGCTTCTTTGCGACCATGAATCAAAAAAGTCAGATGAATCAAACCGCCAATCAGTTTTTGCCAAGCTTTATCCGCT
CTCATCCACTGAGCAATGAGCGCTTGAGTGAATCTCAAAGCCGTGCGCAGCGTTATAATACGCTGCCGTTAAATCAGCAA
CAGCGTCATCAAGCTTTGTTTGATCTGCTGTATTGGCGCGTACAAAGTACCGGCAAGCATGCTTCAGAGACCGCCTTGAT
GACTGCAGCAAAAAACAGCGTCGGGGCAAAGCTTGCACTGATGCATTGGTATGGCGAGCAGCAGCGCTTTAAAGAGGCAA
ATGATTTATTTGCCGAGCTGTCTGCATTGCCGGTCGCAAAGCGCCAAGTACTAGAGCCATTATTGTCCATTACCCAAAGC
CAGATTTTGACGGAACAAAATAAATGGCAACAAGCTGCTGAAATATTAGAGAGCCAGCAGCGGCTCTATCCTGAGCGCCG
TGACTTACGACTTTATCTGGCAGAAGCATTGACCAATAGCAATCAGCCAACTAAAGCCCAAGCATTGCTTAAGCCATTGA
CTGAACAGCAACCAAGCGACCGTTATGCTTGGCAAAGTTTGCAATTGGCCAATGAAAAATTGGCAAAGACCACCAATTCT
GCACCGCTAAAAAGTATTGCTACTATTAATGCACTACGCTACCGCAGTCATGACCAACTATGGAGTGGAAGCTACGAGCG
CGCGCTGACTTCTTTAACGCAAGCCAAAAAATTGACAGAAAATTTGCAAAATACGGCTCAAGCTAATAGCGCTCGCCCTC
TACTTGCTAATATTAACGCCGAAATCAAAGCCGTAAAAACCGCCAAAGACTTTAAGCCTTAG

Upstream 100 bases:

>100_bases
GCAGACGGCAATTGACGTTCAATAGACAAGCTCGTATAGTCAAAGCACGTTATGATTATGCATATAGGGTACGCACTTGG
ATTATTCTAAAAGACAATCA

Downstream 100 bases:

>100_bases
GCGGTTCTCTGATAATTAACTGCTATAAAGCGCTATATAGAAAAAGCGTTGATTTTATCAATATGCTGTAGCGATTAACC
TTGTAGCGCGTCTTTGACCA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLDKPLINARNKRAITHYVSVQTGLFSKQINHHLSRSFAIKLALSTILLACTSIAYSKSQAMPLSYDSWQTTNTEELSLP
SLRGQGLSFDEQYQNKLLGEWSLRNINGRVKMEHDPWIQETVKELTWRLNAQARQQAPLGLVIIDNPSINAFAAPGGVIG
LNTGTILAANSMDELASVVAHEVAHISQRHYESGADERKKALLMQIGGMLAAIAASTVDGDAAAAVMMGSQTATMNSSMA
FSRNNERDADRVGMQIMNQAGYDPRAMPRFFATMNQKSQMNQTANQFLPSFIRSHPLSNERLSESQSRAQRYNTLPLNQQ
QRHQALFDLLYWRVQSTGKHASETALMTAAKNSVGAKLALMHWYGEQQRFKEANDLFAELSALPVAKRQVLEPLLSITQS
QILTEQNKWQQAAEILESQQRLYPERRDLRLYLAEALTNSNQPTKAQALLKPLTEQQPSDRYAWQSLQLANEKLAKTTNS
APLKSIATINALRYRSHDQLWSGSYERALTSLTQAKKLTENLQNTAQANSARPLLANINAEIKAVKTAKDFKP

Sequences:

>Translated_553_residues
MLDKPLINARNKRAITHYVSVQTGLFSKQINHHLSRSFAIKLALSTILLACTSIAYSKSQAMPLSYDSWQTTNTEELSLP
SLRGQGLSFDEQYQNKLLGEWSLRNINGRVKMEHDPWIQETVKELTWRLNAQARQQAPLGLVIIDNPSINAFAAPGGVIG
LNTGTILAANSMDELASVVAHEVAHISQRHYESGADERKKALLMQIGGMLAAIAASTVDGDAAAAVMMGSQTATMNSSMA
FSRNNERDADRVGMQIMNQAGYDPRAMPRFFATMNQKSQMNQTANQFLPSFIRSHPLSNERLSESQSRAQRYNTLPLNQQ
QRHQALFDLLYWRVQSTGKHASETALMTAAKNSVGAKLALMHWYGEQQRFKEANDLFAELSALPVAKRQVLEPLLSITQS
QILTEQNKWQQAAEILESQQRLYPERRDLRLYLAEALTNSNQPTKAQALLKPLTEQQPSDRYAWQSLQLANEKLAKTTNS
APLKSIATINALRYRSHDQLWSGSYERALTSLTQAKKLTENLQNTAQANSARPLLANINAEIKAVKTAKDFKP
>Mature_553_residues
MLDKPLINARNKRAITHYVSVQTGLFSKQINHHLSRSFAIKLALSTILLACTSIAYSKSQAMPLSYDSWQTTNTEELSLP
SLRGQGLSFDEQYQNKLLGEWSLRNINGRVKMEHDPWIQETVKELTWRLNAQARQQAPLGLVIIDNPSINAFAAPGGVIG
LNTGTILAANSMDELASVVAHEVAHISQRHYESGADERKKALLMQIGGMLAAIAASTVDGDAAAAVMMGSQTATMNSSMA
FSRNNERDADRVGMQIMNQAGYDPRAMPRFFATMNQKSQMNQTANQFLPSFIRSHPLSNERLSESQSRAQRYNTLPLNQQ
QRHQALFDLLYWRVQSTGKHASETALMTAAKNSVGAKLALMHWYGEQQRFKEANDLFAELSALPVAKRQVLEPLLSITQS
QILTEQNKWQQAAEILESQQRLYPERRDLRLYLAEALTNSNQPTKAQALLKPLTEQQPSDRYAWQSLQLANEKLAKTTNS
APLKSIATINALRYRSHDQLWSGSYERALTSLTQAKKLTENLQNTAQANSARPLLANINAEIKAVKTAKDFKP

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=443, Percent_Identity=25.9593679458239, Blast_Score=133, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 61747; Mature: 61747

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKPLINARNKRAITHYVSVQTGLFSKQINHHLSRSFAIKLALSTILLACTSIAYSKSQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AMPLSYDSWQTTNTEELSLPSLRGQGLSFDEQYQNKLLGEWSLRNINGRVKMEHDPWIQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCEEEECCCCHHHH
TVKELTWRLNAQARQQAPLGLVIIDNPSINAFAAPGGVIGLNTGTILAANSMDELASVVA
HHHHHHHHHCCHHHHCCCEEEEEECCCCCCEEECCCCEEEECCCCEEEECCHHHHHHHHH
HEVAHISQRHYESGADERKKALLMQIGGMLAAIAASTVDGDAAAAVMMGSQTATMNSSMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCEE
FSRNNERDADRVGMQIMNQAGYDPRAMPRFFATMNQKSQMNQTANQFLPSFIRSHPLSNE
ECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLSESQSRAQRYNTLPLNQQQRHQALFDLLYWRVQSTGKHASETALMTAAKNSVGAKLAL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEH
MHWYGEQQRFKEANDLFAELSALPVAKRQVLEPLLSITQSQILTEQNKWQQAAEILESQQ
HHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLYPERRDLRLYLAEALTNSNQPTKAQALLKPLTEQQPSDRYAWQSLQLANEKLAKTTNS
HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
APLKSIATINALRYRSHDQLWSGSYERALTSLTQAKKLTENLQNTAQANSARPLLANINA
CCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
EIKAVKTAKDFKP
HHEEEECCCCCCC
>Mature Secondary Structure
MLDKPLINARNKRAITHYVSVQTGLFSKQINHHLSRSFAIKLALSTILLACTSIAYSKSQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AMPLSYDSWQTTNTEELSLPSLRGQGLSFDEQYQNKLLGEWSLRNINGRVKMEHDPWIQE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCEEEECCCCHHHH
TVKELTWRLNAQARQQAPLGLVIIDNPSINAFAAPGGVIGLNTGTILAANSMDELASVVA
HHHHHHHHHCCHHHHCCCEEEEEECCCCCCEEECCCCEEEECCCCEEEECCHHHHHHHHH
HEVAHISQRHYESGADERKKALLMQIGGMLAAIAASTVDGDAAAAVMMGSQTATMNSSMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCCCEE
FSRNNERDADRVGMQIMNQAGYDPRAMPRFFATMNQKSQMNQTANQFLPSFIRSHPLSNE
ECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
RLSESQSRAQRYNTLPLNQQQRHQALFDLLYWRVQSTGKHASETALMTAAKNSVGAKLAL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEH
MHWYGEQQRFKEANDLFAELSALPVAKRQVLEPLLSITQSQILTEQNKWQQAAEILESQQ
HHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLYPERRDLRLYLAEALTNSNQPTKAQALLKPLTEQQPSDRYAWQSLQLANEKLAKTTNS
HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
APLKSIATINALRYRSHDQLWSGSYERALTSLTQAKKLTENLQNTAQANSARPLLANINA
CCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
EIKAVKTAKDFKP
HHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]