Click here to switch to the map view.

The map label for this gene is yhbH [C]

Identifier: 93005055

GI number: 93005055

Start: 269394

End: 269762

Strand: Direct

Name: yhbH [C]

Synonym: Pcryo_0224

Alternate gene names: 93005055

Gene position: 269394-269762 (Clockwise)

Preceding gene: 93005054

Following gene: 93005060

Centisome position: 8.8

GC content: 41.19

Gene sequence:

>369_bases
ATGAATGTTTCTATCAGTGGTCACCATATCAGTATTACCGATGCCATGGACACCGCAGTTCGCGAAAAACTTGAAAAAGT
CGAGCGTCACTTTGATCAGATTCAAAGTATTCAAGTGATTCTATCGCTAGATAATAGCGGTGCTAAAAAGAGCCATAAGG
CTGAAGCTATCATGCGAGTCTCGGGTAAAGAGATGTTTGTCCAAGCTCTTGATGATGATATGTATAAAGCCATAAATGAG
ATGGCAGACAAACTTGATAGACAAGTACGCAAGTATAAAACAAAAATGGAGAGCAAAAAAACACAGGGTGCAGGGCGTGA
TTCTCGCTATGAAGATTTGATGACGGCTGAAGCTGAGCCTGCAGTTTAA

Upstream 100 bases:

>100_bases
GAGGATAAAGATACAAGATTATTTTGTGGTAAGGCAGGATGATAAGAGCAGCGATGCGACCTCATCTGTTGATTGTAAGT
ACTAATAAGAGGACAATAAT

Downstream 100 bases:

>100_bases
TGATAGTTTGCTGTGTCATAAAATTTTAATAATTATTAGCCAATAAATAAATGCACAAATAGCACGGTTATTAAATTGAA
CAGTATTCCTGAGTAATTTG

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF130 [H]

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNVSISGHHISITDAMDTAVREKLEKVERHFDQIQSIQVILSLDNSGAKKSHKAEAIMRVSGKEMFVQALDDDMYKAINE
MADKLDRQVRKYKTKMESKKTQGAGRDSRYEDLMTAEAEPAV

Sequences:

>Translated_122_residues
MNVSISGHHISITDAMDTAVREKLEKVERHFDQIQSIQVILSLDNSGAKKSHKAEAIMRVSGKEMFVQALDDDMYKAINE
MADKLDRQVRKYKTKMESKKTQGAGRDSRYEDLMTAEAEPAV
>Mature_122_residues
MNVSISGHHISITDAMDTAVREKLEKVERHFDQIQSIQVILSLDNSGAKKSHKAEAIMRVSGKEMFVQALDDDMYKAINE
MADKLDRQVRKYKTKMESKKTQGAGRDSRYEDLMTAEAEPAV

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=97, Percent_Identity=36.0824742268041, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13817; Mature: 13817

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSISGHHISITDAMDTAVREKLEKVERHFDQIQSIQVILSLDNSGAKKSHKAEAIMRV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
SGKEMFVQALDDDMYKAINEMADKLDRQVRKYKTKMESKKTQGAGRDSRYEDLMTAEAEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
AV
CC
>Mature Secondary Structure
MNVSISGHHISITDAMDTAVREKLEKVERHFDQIQSIQVILSLDNSGAKKSHKAEAIMRV
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
SGKEMFVQALDDDMYKAINEMADKLDRQVRKYKTKMESKKTQGAGRDSRYEDLMTAEAEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
AV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1417413 [H]