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The map label for this gene is 93005011

Identifier: 93005011

GI number: 93005011

Start: 211393

End: 212046

Strand: Direct

Name: 93005011

Synonym: Pcryo_0180

Alternate gene names: NA

Gene position: 211393-212046 (Clockwise)

Preceding gene: 93005009

Following gene: 93005020

Centisome position: 6.91

GC content: 44.8

Gene sequence:

>654_bases
ATGTCAAAGAGTTTATCCAAACGCCCGTCTAAATCCGCTGCTAAAGCCAAAAAATCTGCACCTCATACCTCTGAGGTTGA
AGAGCTAGCGATTGCTAAACCCAGCACCCGCATGGCAGCGATTCTTTATGATGGTATGCTGATTTTAGCATTATTATTTT
TGGTAGGGACGGTGCTGACGGTGATTGGCACCTTGTTGACGATGGAGACGGGTAGCGAGTCGTCACAAGCTCAATCACTG
CCAACATGGTATCAAAACGTTATTATGACACCCTCTTTTATCCTGACGTTGGTAGGGTTTTATGGGTTGTTCTGGCGTCG
TGGTGGGCAGACATTAGGTATGCAGACTTGGCGGCTTAAAACCGTTAATAACAACGGTCATCTGCTCACGTGGGGGCAAT
CCTTTAAGCGTGTTCTAGCAGCTAGTATCATGCCACTTATATTTGGCCTCATTGGTAGTGTCATCGGTGGCTCGCGCGCT
ATTTTATTGACCAGTGTCTTTCTGGGCTTTGTTTTTAATTATGCTTTTTGCCTATTCAACTCACGTGGTCTCGCAGTGCA
AGATATGCTATCTAATACCATTACCTTAAAAATGCCAAAAACAGAGAATGAAGGACTATGGCGAGTGATTAGAAACCGCA
AGCGAGGAAAATAA

Upstream 100 bases:

>100_bases
TTCTTCATATCCAATCGACTATCCTGAGTATAGTGTACGATAAGTGCCTGAATTACGGTACAATAGCGCTATTATTCATT
GCTTGCTATGAGCTGGTACC

Downstream 100 bases:

>100_bases
ACCGCATTATCATTGCCATAGTCTGTCAACATATTTTAAACCTTACATGTTGGCTGTTTGCATCAACCATAAAGTATAGC
CGACAAAGAATAAGACCAAA

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Family Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSKSLSKRPSKSAAKAKKSAPHTSEVEELAIAKPSTRMAAILYDGMLILALLFLVGTVLTVIGTLLTMETGSESSQAQSL
PTWYQNVIMTPSFILTLVGFYGLFWRRGGQTLGMQTWRLKTVNNNGHLLTWGQSFKRVLAASIMPLIFGLIGSVIGGSRA
ILLTSVFLGFVFNYAFCLFNSRGLAVQDMLSNTITLKMPKTENEGLWRVIRNRKRGK

Sequences:

>Translated_217_residues
MSKSLSKRPSKSAAKAKKSAPHTSEVEELAIAKPSTRMAAILYDGMLILALLFLVGTVLTVIGTLLTMETGSESSQAQSL
PTWYQNVIMTPSFILTLVGFYGLFWRRGGQTLGMQTWRLKTVNNNGHLLTWGQSFKRVLAASIMPLIFGLIGSVIGGSRA
ILLTSVFLGFVFNYAFCLFNSRGLAVQDMLSNTITLKMPKTENEGLWRVIRNRKRGK
>Mature_216_residues
SKSLSKRPSKSAAKAKKSAPHTSEVEELAIAKPSTRMAAILYDGMLILALLFLVGTVLTVIGTLLTMETGSESSQAQSLP
TWYQNVIMTPSFILTLVGFYGLFWRRGGQTLGMQTWRLKTVNNNGHLLTWGQSFKRVLAASIMPLIFGLIGSVIGGSRAI
LLTSVFLGFVFNYAFCLFNSRGLAVQDMLSNTITLKMPKTENEGLWRVIRNRKRGK

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23924; Mature: 23792

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSLSKRPSKSAAKAKKSAPHTSEVEELAIAKPSTRMAAILYDGMLILALLFLVGTVLT
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VIGTLLTMETGSESSQAQSLPTWYQNVIMTPSFILTLVGFYGLFWRRGGQTLGMQTWRLK
HHHHHHHHCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
TVNNNGHLLTWGQSFKRVLAASIMPLIFGLIGSVIGGSRAILLTSVFLGFVFNYAFCLFN
EECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
SRGLAVQDMLSNTITLKMPKTENEGLWRVIRNRKRGK
CCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SKSLSKRPSKSAAKAKKSAPHTSEVEELAIAKPSTRMAAILYDGMLILALLFLVGTVLT
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VIGTLLTMETGSESSQAQSLPTWYQNVIMTPSFILTLVGFYGLFWRRGGQTLGMQTWRLK
HHHHHHHHCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
TVNNNGHLLTWGQSFKRVLAASIMPLIFGLIGSVIGGSRAILLTSVFLGFVFNYAFCLFN
EECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
SRGLAVQDMLSNTITLKMPKTENEGLWRVIRNRKRGK
CCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA