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The map label for this gene is 93004993

Identifier: 93004993

GI number: 93004993

Start: 191845

End: 192483

Strand: Direct

Name: 93004993

Synonym: Pcryo_0162

Alternate gene names: NA

Gene position: 191845-192483 (Clockwise)

Preceding gene: 93004991

Following gene: 93004994

Centisome position: 6.27

GC content: 46.01

Gene sequence:

>639_bases
ATGTTAGCGTCTCAAGTTGTATCGAGTGTTGTGAAGCCATCTTGGTTTGCCCGTCCCACTTGCGTGGTGGCTGCCGACTT
AATTGGCAAGGTGTTGTGTCGAGAGCTGACAGACAGCGATGGTCAACAAAAAATCTTGCGTATGCGTATCTCAGAGACAG
AAGCCTATATTGGCGAGGGGGATGCTGCGTGTCATGCGCATGCAGGCACACGTACGCCGCGTACAGAGATTATGTACCAT
ATAGGCGGTGTTTTTTATGTATACCTGACTTATGGTATTCATCATATGCTCAATTTGGTCAGTGGACCAACAGAGTCGCC
AGAAGCTGTTTTAATACGTGCTGGATTTTTAATAGAGGGTAGCGCTCGCTTAATGAATGAGCAATTATTAGACGTTAATA
GACAACTTAATCATATCAAACAGCTGGCAGGTCCTGGCAAGCTGACCAAGGGCTTACAGATAGATAGAACGTTATACGGT
AAGCCAATCACGCCTGCGTCAAAAGTTTGGGTGGAGGATGATGGTTGTCAGCCACTAGTATCATTACGCCCCCGTATTGG
CATTGATTATGCTGGCGACGCAAAAGAGTGGTTGCTGCGTTATATATGGACTGATCACCCTTCTTTGTCAAAAAAGTAG

Upstream 100 bases:

>100_bases
GTGGTCGCTATCAGACAGCCTTTGATGGCTTTTTATGTTAAATTTATGCTGCTGTGATAATAGAGTGTAAATACAAACCC
TTATAAAAAGGTTATGACTG

Downstream 100 bases:

>100_bases
AAAATTTTTTATAGTTTTAACTTAATTTTCAAGTATTTGATGAGGCAATTAATTTAATAAGGTTGCTATTTAATGGGGCT
AGAACATGTATAAACTCACC

Product: DNA-3-methyladenine glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLASQVVSSVVKPSWFARPTCVVAADLIGKVLCRELTDSDGQQKILRMRISETEAYIGEGDAACHAHAGTRTPRTEIMYH
IGGVFYVYLTYGIHHMLNLVSGPTESPEAVLIRAGFLIEGSARLMNEQLLDVNRQLNHIKQLAGPGKLTKGLQIDRTLYG
KPITPASKVWVEDDGCQPLVSLRPRIGIDYAGDAKEWLLRYIWTDHPSLSKK

Sequences:

>Translated_212_residues
MLASQVVSSVVKPSWFARPTCVVAADLIGKVLCRELTDSDGQQKILRMRISETEAYIGEGDAACHAHAGTRTPRTEIMYH
IGGVFYVYLTYGIHHMLNLVSGPTESPEAVLIRAGFLIEGSARLMNEQLLDVNRQLNHIKQLAGPGKLTKGLQIDRTLYG
KPITPASKVWVEDDGCQPLVSLRPRIGIDYAGDAKEWLLRYIWTDHPSLSKK
>Mature_212_residues
MLASQVVSSVVKPSWFARPTCVVAADLIGKVLCRELTDSDGQQKILRMRISETEAYIGEGDAACHAHAGTRTPRTEIMYH
IGGVFYVYLTYGIHHMLNLVSGPTESPEAVLIRAGFLIEGSARLMNEQLLDVNRQLNHIKQLAGPGKLTKGLQIDRTLYG
KPITPASKVWVEDDGCQPLVSLRPRIGIDYAGDAKEWLLRYIWTDHPSLSKK

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family

Homologues:

Organism=Homo sapiens, GI62632769, Length=168, Percent_Identity=32.1428571428571, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI62632771, Length=168, Percent_Identity=32.1428571428571, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI62632765, Length=168, Percent_Identity=32.1428571428571, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 3MGH_PSYCK (Q1QEF7)

Other databases:

- EMBL:   CP000323
- RefSeq:   YP_579430.1
- ProteinModelPortal:   Q1QEF7
- SMR:   Q1QEF7
- STRING:   Q1QEF7
- GeneID:   4035635
- GenomeReviews:   CP000323_GR
- KEGG:   pcr:Pcryo_0162
- NMPDR:   fig|335284.3.peg.765
- eggNOG:   COG2094
- HOGENOM:   HBG664239
- OMA:   NISENAM
- BioCyc:   PCRY335284:PCRYO_0162-MONOMER
- HAMAP:   MF_00527
- InterPro:   IPR011034
- InterPro:   IPR003180
- Gene3D:   G3DSA:3.10.300.10
- PANTHER:   PTHR10429
- TIGRFAMs:   TIGR00567

Pfam domain/function: PF02245 Pur_DNA_glyco; SSF50486 FMT_C_like

EC number: 3.2.2.-

Molecular weight: Translated: 23511; Mature: 23511

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASQVVSSVVKPSWFARPTCVVAADLIGKVLCRELTDSDGQQKILRMRISETEAYIGEG
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
DAACHAHAGTRTPRTEIMYHIGGVFYVYLTYGIHHMLNLVSGPTESPEAVLIRAGFLIEG
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEC
SARLMNEQLLDVNRQLNHIKQLAGPGKLTKGLQIDRTLYGKPITPASKVWVEDDGCQPLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHCCCCCCCCCCEEEECCCCCCHHH
SLRPRIGIDYAGDAKEWLLRYIWTDHPSLSKK
HCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLASQVVSSVVKPSWFARPTCVVAADLIGKVLCRELTDSDGQQKILRMRISETEAYIGEG
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
DAACHAHAGTRTPRTEIMYHIGGVFYVYLTYGIHHMLNLVSGPTESPEAVLIRAGFLIEG
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEEC
SARLMNEQLLDVNRQLNHIKQLAGPGKLTKGLQIDRTLYGKPITPASKVWVEDDGCQPLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHCCCCCCCCCCEEEECCCCCCHHH
SLRPRIGIDYAGDAKEWLLRYIWTDHPSLSKK
HCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA