Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is yhbJ [C]
Identifier: 93004958
GI number: 93004958
Start: 150540
End: 151502
Strand: Direct
Name: yhbJ [C]
Synonym: Pcryo_0127
Alternate gene names: 93004958
Gene position: 150540-151502 (Clockwise)
Preceding gene: 93004957
Following gene: 93004959
Centisome position: 4.92
GC content: 44.44
Gene sequence:
>963_bases ATGCAGGCAAATCAAGACACCCATAATGCTCAATCAAAGCTAACAGATTCTAACGAATCCACTGGTGATAAACTGAGTAT ATTGGTAGTGTCAGGACGTTCAGGCTCAGGGAAAACCTCGGTACTAAATATCCTTGAAGATCTGGGTTTTTATTCTATTG ATAATTTGCCTTTGTCTCTTGTGCCTGAAGCGGCGCAAAAGCTGGTCTGTGATAGTGGAATTAAACGCATTGCCCTTGGG GTGGATATTCGTACGCCGCGCGCAGATTTATCTAACTTTGATGCAATCCATGACAGTTTAAAGCAGACCTATGGCGAAGA GGCGGTCACAGTGATGTATGTGACGGCGCAAGAAGAGACGCTGGTTGCACGCTTTAATGCCACTCGCCGCATCCATCCGT TGATGGTGTTAGATACCAAAGGCGTAGAAAATAACGTTTATAATCTACCAGCAGCTATTGAGAAAGAAATACAGCTTTTG CAGCCGATATTTAAGCATGCCGATATTAAGATAGATACCAGTATGCTCAATATCCATCAGCTAAAAGAGCGTCTGCGTGA TTATGTGGGTGTAGATAATCAAATCGTGATTAATTTGCTATCGTTTGGTTTCAAGTACGGCAGCCCTATCGATGCAGACT TCGTTTTTGATGTACGAATATTGCCCAATCCGCATTGGAATCCGACACTGCGCTCGGCAACAGGTCTTGACGCTGAAGTG AGTGCATTTTTTGCCGATTATCCAGAGGTCGCTGAGATGACGGGAGATATTGCTACATTCTTGAATCGTTGGTTACCTGA TTTTTTACATAATAATCGTCATACGGTAACGGTTGCCATTGGCTGCACTGGTGGCAAGCACCGCTCGGTATTTATCACCA AACACCTGCAAGATAGATTGCAAAATAGCTTGCCAGAAGGCTTAACCGTGACGGCGAAACACCGTGAAAAGCATCGCTGG TAG
Upstream 100 bases:
>100_bases GCTTGCTAGACAATCGATTGGTCACGATTAATAAAGTTTGATCACACTGCTATTTATAATATTGTAATTTGCGGGATGCA ATTTATAAGGATGACGGAAC
Downstream 100 bases:
>100_bases CGTTTGCTAAACCTTTTATACCTAATTTTTTTATACCTATTATTTATTTTTAAACATGGAAAGCTTTTATGATTGACTGG TCAGAACAAGATATGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MQANQDTHNAQSKLTDSNESTGDKLSILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSLVPEAAQKLVCDSGIKRIALG VDIRTPRADLSNFDAIHDSLKQTYGEEAVTVMYVTAQEETLVARFNATRRIHPLMVLDTKGVENNVYNLPAAIEKEIQLL QPIFKHADIKIDTSMLNIHQLKERLRDYVGVDNQIVINLLSFGFKYGSPIDADFVFDVRILPNPHWNPTLRSATGLDAEV SAFFADYPEVAEMTGDIATFLNRWLPDFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDRLQNSLPEGLTVTAKHREKHRW
Sequences:
>Translated_320_residues MQANQDTHNAQSKLTDSNESTGDKLSILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSLVPEAAQKLVCDSGIKRIALG VDIRTPRADLSNFDAIHDSLKQTYGEEAVTVMYVTAQEETLVARFNATRRIHPLMVLDTKGVENNVYNLPAAIEKEIQLL QPIFKHADIKIDTSMLNIHQLKERLRDYVGVDNQIVINLLSFGFKYGSPIDADFVFDVRILPNPHWNPTLRSATGLDAEV SAFFADYPEVAEMTGDIATFLNRWLPDFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDRLQNSLPEGLTVTAKHREKHRW >Mature_320_residues MQANQDTHNAQSKLTDSNESTGDKLSILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSLVPEAAQKLVCDSGIKRIALG VDIRTPRADLSNFDAIHDSLKQTYGEEAVTVMYVTAQEETLVARFNATRRIHPLMVLDTKGVENNVYNLPAAIEKEIQLL QPIFKHADIKIDTSMLNIHQLKERLRDYVGVDNQIVINLLSFGFKYGSPIDADFVFDVRILPNPHWNPTLRSATGLDAEV SAFFADYPEVAEMTGDIATFLNRWLPDFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDRLQNSLPEGLTVTAKHREKHRW
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=293, Percent_Identity=41.296928327645, Blast_Score=226, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 35758; Mature: 35758
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQANQDTHNAQSKLTDSNESTGDKLSILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSL CCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHH VPEAAQKLVCDSGIKRIALGVDIRTPRADLSNFDAIHDSLKQTYGEEAVTVMYVTAQEET HHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCE LVARFNATRRIHPLMVLDTKGVENNVYNLPAAIEKEIQLLQPIFKHADIKIDTSMLNIHQ EEEECCCCCCCCEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH LKERLRDYVGVDNQIVINLLSFGFKYGSPIDADFVFDVRILPNPHWNPTLRSATGLDAEV HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH SAFFADYPEVAEMTGDIATFLNRWLPDFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDRL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHHHHH QNSLPEGLTVTAKHREKHRW HHCCCCCCEEEECCHHCCCC >Mature Secondary Structure MQANQDTHNAQSKLTDSNESTGDKLSILVVSGRSGSGKTSVLNILEDLGFYSIDNLPLSL CCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHH VPEAAQKLVCDSGIKRIALGVDIRTPRADLSNFDAIHDSLKQTYGEEAVTVMYVTAQEET HHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCE LVARFNATRRIHPLMVLDTKGVENNVYNLPAAIEKEIQLLQPIFKHADIKIDTSMLNIHQ EEEECCCCCCCCEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH LKERLRDYVGVDNQIVINLLSFGFKYGSPIDADFVFDVRILPNPHWNPTLRSATGLDAEV HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH SAFFADYPEVAEMTGDIATFLNRWLPDFLHNNRHTVTVAIGCTGGKHRSVFITKHLQDRL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHHHHH QNSLPEGLTVTAKHREKHRW HHCCCCCCEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA