Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93004936
Identifier: 93004936
GI number: 93004936
Start: 121154
End: 122119
Strand: Direct
Name: 93004936
Synonym: Pcryo_0105
Alternate gene names: NA
Gene position: 121154-122119 (Clockwise)
Preceding gene: 93004935
Following gene: 93004938
Centisome position: 3.96
GC content: 42.86
Gene sequence:
>966_bases ATGTTTAAATTTTGGGTAGTAGAACATGATAATGGTGTTTATGGTAACCTTACCAATAAAGGTATTGAGTGTCCACAGCA CTCAAATGCCTTACTGGCGGCGGCATTGACTGGTGTCTTATTGTTAAGCGGATGTCAGCAGCAAGCAGCAGAAGAAAATG TAGCGGATAAGCCCCAAACCAGTGAGCAAACAAGTGAAGAAGACAGCCAACCGATGGCGCAAAGTGATTCTGCTGCAGCA CGTATTGAGCAGTTCCAACCTTTATATGTTACCCAGTTTCAGGCATTGCAGGGGCGTCTGCAAGCAGAGTACGAGTCGCT ACAAGCTGCTGATATTGCAGACAGTGAAAATGCTTTATTAGTCGATGAGCCTACTGTTGCAACTGGCAATAATCAGCCAG CTAACAACAGCGATCAAGGAGCTATAGCTGCTACGCCACAACTAACACAAGATCCGGTAGCAGCTGCAAAGGATGCAGCA AATGGCAACTCTGTGACAGATACTGAAATAAACGATGAAATTAACACCAGTACCGAAGTTGGTGAGCGCGATTTAACGGT GTTAAAGCGTATTAGCTTAGAGCCACGTAAGCCTATGATATTAACTGAAAAGCAGATTATAGAACGCTATGAGCAAGCAA TGGAAGCGCTTTATCAGCCAGTGACCACGCCACTGAATGCGCAGGATACGGATACTTTGATCAATATCGCAACCTTAGTA CCACAGCTTTTTGAAGATGCAGAAATTGCTGGCAGAGTCAGTGCTAAAAGCCCTGCATTGGCACGTTTAATTATTCAGCA TCAAGTTTGGGAGCAGATAGAAGCTCAGCAAGTACTAGATATGCAAAAAATGAAACAAACCCAACAACAAGAATTTGAGA TGCTGATGGCGAAATTCAATGAAACGATTGAAGGTTATGATGAACAAATCGCTAAATATGAGCAAACGTTAAAAGAGTTT AAGTAA
Upstream 100 bases:
>100_bases TTGCGACTAATCTTGAGCCTAGTAGACCATGCCGCGACTGATTCTTAACCTCTATATAGCTATGTGATATTTTTGTTTTT AACACAGGAAATAAATTCAG
Downstream 100 bases:
>100_bases TCCGTTAAATTTAGCCATAAAAAAATCTCGCACATGGCGAGATTTTTTATGACTGTTTACTTTTACACATGCTTAATTAC TATTTACGATCTTCAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MFKFWVVEHDNGVYGNLTNKGIECPQHSNALLAAALTGVLLLSGCQQQAAEENVADKPQTSEQTSEEDSQPMAQSDSAAA RIEQFQPLYVTQFQALQGRLQAEYESLQAADIADSENALLVDEPTVATGNNQPANNSDQGAIAATPQLTQDPVAAAKDAA NGNSVTDTEINDEINTSTEVGERDLTVLKRISLEPRKPMILTEKQIIERYEQAMEALYQPVTTPLNAQDTDTLINIATLV PQLFEDAEIAGRVSAKSPALARLIIQHQVWEQIEAQQVLDMQKMKQTQQQEFEMLMAKFNETIEGYDEQIAKYEQTLKEF K
Sequences:
>Translated_321_residues MFKFWVVEHDNGVYGNLTNKGIECPQHSNALLAAALTGVLLLSGCQQQAAEENVADKPQTSEQTSEEDSQPMAQSDSAAA RIEQFQPLYVTQFQALQGRLQAEYESLQAADIADSENALLVDEPTVATGNNQPANNSDQGAIAATPQLTQDPVAAAKDAA NGNSVTDTEINDEINTSTEVGERDLTVLKRISLEPRKPMILTEKQIIERYEQAMEALYQPVTTPLNAQDTDTLINIATLV PQLFEDAEIAGRVSAKSPALARLIIQHQVWEQIEAQQVLDMQKMKQTQQQEFEMLMAKFNETIEGYDEQIAKYEQTLKEF K >Mature_321_residues MFKFWVVEHDNGVYGNLTNKGIECPQHSNALLAAALTGVLLLSGCQQQAAEENVADKPQTSEQTSEEDSQPMAQSDSAAA RIEQFQPLYVTQFQALQGRLQAEYESLQAADIADSENALLVDEPTVATGNNQPANNSDQGAIAATPQLTQDPVAAAKDAA NGNSVTDTEINDEINTSTEVGERDLTVLKRISLEPRKPMILTEKQIIERYEQAMEALYQPVTTPLNAQDTDTLINIATLV PQLFEDAEIAGRVSAKSPALARLIIQHQVWEQIEAQQVLDMQKMKQTQQQEFEMLMAKFNETIEGYDEQIAKYEQTLKEF K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35516; Mature: 35516
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFWVVEHDNGVYGNLTNKGIECPQHSNALLAAALTGVLLLSGCQQQAAEENVADKPQT CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SEQTSEEDSQPMAQSDSAAARIEQFQPLYVTQFQALQGRLQAEYESLQAADIADSENALL CHHCCHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VDEPTVATGNNQPANNSDQGAIAATPQLTQDPVAAAKDAANGNSVTDTEINDEINTSTEV ECCCCEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHC GERDLTVLKRISLEPRKPMILTEKQIIERYEQAMEALYQPVTTPLNAQDTDTLINIATLV CHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH PQLFEDAEIAGRVSAKSPALARLIIQHQVWEQIEAQQVLDMQKMKQTQQQEFEMLMAKFN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETIEGYDEQIAKYEQTLKEFK HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFKFWVVEHDNGVYGNLTNKGIECPQHSNALLAAALTGVLLLSGCQQQAAEENVADKPQT CEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SEQTSEEDSQPMAQSDSAAARIEQFQPLYVTQFQALQGRLQAEYESLQAADIADSENALL CHHCCHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VDEPTVATGNNQPANNSDQGAIAATPQLTQDPVAAAKDAANGNSVTDTEINDEINTSTEV ECCCCEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHC GERDLTVLKRISLEPRKPMILTEKQIIERYEQAMEALYQPVTTPLNAQDTDTLINIATLV CHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH PQLFEDAEIAGRVSAKSPALARLIIQHQVWEQIEAQQVLDMQKMKQTQQQEFEMLMAKFN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETIEGYDEQIAKYEQTLKEFK HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA