Click here to switch to the map view.

The map label for this gene is yhbO [C]

Identifier: 93004908

GI number: 93004908

Start: 89380

End: 89904

Strand: Direct

Name: yhbO [C]

Synonym: Pcryo_0077

Alternate gene names: 93004908

Gene position: 89380-89904 (Clockwise)

Preceding gene: 93004907

Following gene: 93004909

Centisome position: 2.92

GC content: 39.05

Gene sequence:

>525_bases
ATGAAAACGATTGCTTTTTTACTTCATAACAACTTTGAACAAGCAGAATATGAAGAGGTTAACAACAAACTAAAAGCCAA
AGGTTACAGCACACTTCTAATAACCACCAATAAAGAAAAAGAAGTCCAAGGTATGCAGCAAGACGTCAACAAAGGCGATA
CCTTTACCGCTGATATTTTTGCAAAAGATGCAAAACCTGCGGAGTATGATGCTTTAGTTTTGCCGGGTGGTACGGTTAAT
GCTGATACCATGCGTGGTAACGAAGATGCACACAGTATTATTACTGCAATAAATGAGGCTGGTAAACCGCTTGCTGTTAT
CTGCCATGCGCCTTGGATATTAATCAATACTGGTATAGCTAAGGGTAAAACGTTAACGGCTTATCATACTTTACAACTTG
ATTTAGCAAATGCTGGGGCAAAATTCGTAGACGCAAGCGTGCAGATAGACGGTAATCTGATTACTTCACGCAACCCAGAT
GATATTAATAATTTCGTCGCAGCGATTGATAAAGCTTTAACATGA

Upstream 100 bases:

>100_bases
TAAATAAAAATAACAATACATTAATTCATATAAATTAATTTTTACAATTATAAGAAAATTATTCAGTCATAAATATAATT
TACAAATAATAGGAAGTACT

Downstream 100 bases:

>100_bases
GTTCCAATCGTTTTAACTTAGAGTAATTTTTATTCATTATCTATAAGGATATAACACGATGACACAGCCTAATCCAAACG
ATACCAAATTTGAGCAACAA

Product: peptidase C56, PfpI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKTIAFLLHNNFEQAEYEEVNNKLKAKGYSTLLITTNKEKEVQGMQQDVNKGDTFTADIFAKDAKPAEYDALVLPGGTVN
ADTMRGNEDAHSIITAINEAGKPLAVICHAPWILINTGIAKGKTLTAYHTLQLDLANAGAKFVDASVQIDGNLITSRNPD
DINNFVAAIDKALT

Sequences:

>Translated_174_residues
MKTIAFLLHNNFEQAEYEEVNNKLKAKGYSTLLITTNKEKEVQGMQQDVNKGDTFTADIFAKDAKPAEYDALVLPGGTVN
ADTMRGNEDAHSIITAINEAGKPLAVICHAPWILINTGIAKGKTLTAYHTLQLDLANAGAKFVDASVQIDGNLITSRNPD
DINNFVAAIDKALT
>Mature_174_residues
MKTIAFLLHNNFEQAEYEEVNNKLKAKGYSTLLITTNKEKEVQGMQQDVNKGDTFTADIFAKDAKPAEYDALVLPGGTVN
ADTMRGNEDAHSIITAINEAGKPLAVICHAPWILINTGIAKGKTLTAYHTLQLDLANAGAKFVDASVQIDGNLITSRNPD
DINNFVAAIDKALT

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=166, Percent_Identity=35.5421686746988, Blast_Score=105, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28571932, Length=106, Percent_Identity=34.9056603773585, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 18817; Mature: 18817

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIAFLLHNNFEQAEYEEVNNKLKAKGYSTLLITTNKEKEVQGMQQDVNKGDTFTADIF
CCEEEEEEECCCCHHHHHHHHHHEECCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEE
AKDAKPAEYDALVLPGGTVNADTMRGNEDAHSIITAINEAGKPLAVICHAPWILINTGIA
ECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEEEECCCC
KGKTLTAYHTLQLDLANAGAKFVDASVQIDGNLITSRNPDDINNFVAAIDKALT
CCCEEEEEEEEEEEECCCCCEEEEEEEEECCEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIAFLLHNNFEQAEYEEVNNKLKAKGYSTLLITTNKEKEVQGMQQDVNKGDTFTADIF
CCEEEEEEECCCCHHHHHHHHHHEECCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEE
AKDAKPAEYDALVLPGGTVNADTMRGNEDAHSIITAINEAGKPLAVICHAPWILINTGIA
ECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEEEEECCCC
KGKTLTAYHTLQLDLANAGAKFVDASVQIDGNLITSRNPDDINNFVAAIDKALT
CCCEEEEEEEEEEEECCCCCEEEEEEEEECCEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]