Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93004895
Identifier: 93004895
GI number: 93004895
Start: 73502
End: 73837
Strand: Direct
Name: 93004895
Synonym: Pcryo_0064
Alternate gene names: NA
Gene position: 73502-73837 (Clockwise)
Preceding gene: 93004887
Following gene: 93004896
Centisome position: 2.4
GC content: 41.96
Gene sequence:
>336_bases ATGACAGCGGCGCAATTTACTAATGTAACAGTCAATGCTCAAGCCACGATATCCTATGATGGTCGTTGCTCAAGCCATAC CATTATGTTCGAGGACGGTCGTCATAAAACATTAGGTGTTATCTTGCCTTGTGATAATTTGGTCGAGCATTATCACTTTA GTACCAATACATCTGAACGTATTGAAATCACTAGCGGTGAGTGCGAAGTCAAAATAAATGGGGAAGAGGAGTTCAGCTAC TACCGCGCAGGACAGTCATTCGTGGTTGAAGGTAATAGTGGTTTCAATTTACGCACAGAACAGATCGTTCAGTATATCTG TCACTTAGAAGGCTAA
Upstream 100 bases:
>100_bases GGTAAAAGGTAGATATAACAACGCTTATCTAAGCATTTGCTTATCTACACATTCAATTTGGTTTTTTAGTTGGCAATAAT TATTTGATAAGGAAGCCACT
Downstream 100 bases:
>100_bases TACGCCTTAAAGTGTCGTTAGATAATTGATGAAGCCAAAAGCCAATGATTCCAAAGAAATAAATCTTATCAGGTTTATTT CTTTTTTTTGCTGACATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTAAQFTNVTVNAQATISYDGRCSSHTIMFEDGRHKTLGVILPCDNLVEHYHFSTNTSERIEITSGECEVKINGEEEFSY YRAGQSFVVEGNSGFNLRTEQIVQYICHLEG
Sequences:
>Translated_111_residues MTAAQFTNVTVNAQATISYDGRCSSHTIMFEDGRHKTLGVILPCDNLVEHYHFSTNTSERIEITSGECEVKINGEEEFSY YRAGQSFVVEGNSGFNLRTEQIVQYICHLEG >Mature_110_residues TAAQFTNVTVNAQATISYDGRCSSHTIMFEDGRHKTLGVILPCDNLVEHYHFSTNTSERIEITSGECEVKINGEEEFSYY RAGQSFVVEGNSGFNLRTEQIVQYICHLEG
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009664 - InterPro: IPR014710 [H]
Pfam domain/function: PF06865 DUF1255 [H]
EC number: NA
Molecular weight: Translated: 12474; Mature: 12343
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAQFTNVTVNAQATISYDGRCSSHTIMFEDGRHKTLGVILPCDNLVEHYHFSTNTSER CCCCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEECCHHHHHHEECCCCCCCE IEITSGECEVKINGEEEFSYYRAGQSFVVEGNSGFNLRTEQIVQYICHLEG EEEECCEEEEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TAAQFTNVTVNAQATISYDGRCSSHTIMFEDGRHKTLGVILPCDNLVEHYHFSTNTSER CCCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEECCHHHHHHEECCCCCCCE IEITSGECEVKINGEEEFSYYRAGQSFVVEGNSGFNLRTEQIVQYICHLEG EEEECCEEEEEECCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA