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The map label for this gene is yeiE [H]

Identifier: 92113886

GI number: 92113886

Start: 2008575

End: 2009465

Strand: Direct

Name: yeiE [H]

Synonym: Csal_1763

Alternate gene names: 92113886

Gene position: 2008575-2009465 (Clockwise)

Preceding gene: 92113884

Following gene: 92113888

Centisome position: 54.34

GC content: 66.22

Gene sequence:

>891_bases
ATGTCGACCCATGTGACCTTTCGCCAGCTCCAGGTATTCGTTGCCGTGATTCGTGGCGGCGCCGTCAATGCGGCCGCGCG
GCAATTGCGTCTCTCACAGTCGGCGACCAGCCAGGCACTGGCCGATCTGGAACGTCAGCTCGGCGTGGTGCTCTTCGAAC
GGCTGGGGCGTCGTCTAGAGCTCAACGATGCCGGTCGTCGATTGCTCCCGTACGCGGAGAAAGTGCTCAACGGGCTCGAT
GAGCTGGTCGATGCGGCGCGCGAGCCCGACGGCGAGCTGCGGGGCACGCTGCACGTCGCGGCCAGCGCCACGATCGGCAC
CTATCTGCTGCCGATGCTGGCCGGACGTTTCATCGAGCGGCATCCCGCCGTCGACCTGCAACTGCGGTTGCGCAACACCG
AGGACGTGATGCGCGACATTCAGCGCTTCGACGCCGATTTGGGATTGATCGAGGGGCAGTGCAGCGAGTCACGGCTGGTG
AGCGAACTCTGGTGTCAGGACGAGATGGTGGTGGTGGCCGCGCCCCAGCACCCGTTGGCGGCACGCGACGGCCTCGGGGT
CGAGGAGCTGCAGGCAGCGCAATGGATCCTGCGTGAACCGGGCTCGGGGACGCGGGCGATCTTCGAGGCGGCCATCCACC
CCCACGTCGAGCGTATCCGCGTGCGTATGGAGCTCGATCAGCACGAAGCGATCAAGCAGGCAGTGCGCGCCGGCTTCGGG
TTGGGCTGCCTGTCACGGCTGAGCGTGGCGGGCGAGCTCGAGCGGGGCGAACTGGTGGCGTTGAGAAGCCCGCTGCAACT
GACCCGTTCCTTTTCGCTGGTCTGGCATCCCGAGCGCTACCGCAGCCCGCTCTGGCAGGCCTTCAAGGTCTTTCTTCGCG
ACAATCACTGA

Upstream 100 bases:

>100_bases
ATGATGGGCGGTACCGCCATGGATGTGTCTCTCCAGGCTAAACCGGAATAGAATTATGTGTTATGTGGTAATAACGAAAT
GACAGTTAAGTAAAACCGAT

Downstream 100 bases:

>100_bases
GCGTCGTCGAGGCTTCACCGATATCCCCCGACATGCGGGCCGGCTCCGCTATAGCCGGCTGGCATAGCAGTATTCCTTCG
TCGTCAGTCGCGAGATGCGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSTHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELNDAGRRLLPYAEKVLNGLD
ELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPAVDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLV
SELWCQDEMVVVAAPQHPLAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFG
LGCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRDNH

Sequences:

>Translated_296_residues
MSTHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELNDAGRRLLPYAEKVLNGLD
ELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPAVDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLV
SELWCQDEMVVVAAPQHPLAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFG
LGCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRDNH
>Mature_295_residues
STHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELNDAGRRLLPYAEKVLNGLDE
LVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPAVDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLVS
ELWCQDEMVVVAAPQHPLAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFGL
GCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRDNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=290, Percent_Identity=42.7586206896552, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI87082132, Length=258, Percent_Identity=31.3953488372093, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI145693105, Length=241, Percent_Identity=25.7261410788382, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1789204, Length=288, Percent_Identity=29.5138888888889, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=28.1879194630872, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788748, Length=291, Percent_Identity=27.8350515463918, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI157672245, Length=286, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787530, Length=246, Percent_Identity=26.4227642276423, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787601, Length=214, Percent_Identity=25.7009345794392, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790399, Length=280, Percent_Identity=26.7857142857143, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081904, Length=183, Percent_Identity=28.4153005464481, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1790208, Length=295, Percent_Identity=25.4237288135593, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788296, Length=244, Percent_Identity=25.8196721311475, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788706, Length=171, Percent_Identity=29.2397660818713, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790262, Length=265, Percent_Identity=27.1698113207547, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789506, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787128, Length=288, Percent_Identity=26.0416666666667, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787879, Length=304, Percent_Identity=25.3289473684211, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787589, Length=298, Percent_Identity=27.8523489932886, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789639, Length=264, Percent_Identity=25.3787878787879, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786448, Length=168, Percent_Identity=33.9285714285714, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33127; Mature: 32995

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LNDAGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIER
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
HPAVDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLVSELWCQDEMVVVAAPQHPLA
CCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
ARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFG
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LGCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRDNH
HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHEEECCHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
STHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LNDAGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIER
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
HPAVDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSESRLVSELWCQDEMVVVAAPQHPLA
CCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC
ARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVRAGFG
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LGCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRDNH
HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHEEECCHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]