The gene/protein map for NC_007963 is currently unavailable.
Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

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The map label for this gene is ydaD [H]

Identifier: 92113881

GI number: 92113881

Start: 2003572

End: 2004339

Strand: Direct

Name: ydaD [H]

Synonym: Csal_1758

Alternate gene names: 92113881

Gene position: 2003572-2004339 (Clockwise)

Preceding gene: 92113880

Following gene: 92113882

Centisome position: 54.2

GC content: 69.79

Gene sequence:

>768_bases
ATGTTCGATGAGTTTCAGGGCAAGCGCATTCTGGTCACCGGGGCGAGCACCGGCATCGGCGCCGCCGTGGCCAAGCGCTT
CGGCGCACTGGGCGCGCATGTCGCCGTGCATTACAACACCAGCGAGGCGCCGGCACGCGAGGTGGTCGAGGCCATCGAGC
GCGCCGGTGGCCAGGCGTTCACGCTTCAGCAGGACGTGAGCACCGCCGAGGGCGCCGTCGATGTGGTGGACCGGGCCGCC
GAGCGCCTGGGAGGATTGGACATCCTCGTCAACAACGCGGGGGACATGCTGGGGCGCGTACCGGCGGGGGACATCGAGGC
GGCGCATTACGCACGCGTGATGGACCTCAACGTGCGCTCGGTGACGCTGGCCACGCGCGCGGCGCTCGCCCATTTCCGCC
GCCAGGGCGAGGGCGGCAACATCATCAATACCACGTCGGTGGCGGCCCGCAACGGGGGCGGCCCCGGGGCGTCGCTGTAT
GCCTCGGCCAAGGCCTTCGTCAGCTCGTTCACGCGGGGCATGGCCAAGGAGCTGGCCGGAGACGGGGTGCGGGTCAATGC
CGTGGCACCGGGTGTCATCGTGACGCCGTTCCATGATCGCCACAGCAGCGATGCCCAGCTCGAGGCCATGCGCGCCGGCA
TTCCCATGGGGCGCCTGGGGACGCCCGAGGAGTGCGTCGGGGCGTTTCTGTTCCTGGCATCCGACGCCATGAGCGGGTAT
GTCACGGGGCAGATCCTGGAGGTCAACGGCGGGCAGCTGATGCCCTGA

Upstream 100 bases:

>100_bases
CGGTCGGCCCCGCAATCTGGAATCCTGACACGCACTTAGTGTGATGTATGACAGCATGCCGTGTCCGGATGCTGTCTCCA
CCGGCTTGGGAGCAATCACC

Downstream 100 bases:

>100_bases
GCGTCAAGCGGATCGCGGCACGGCCGAGCGCAGACGCGAGATCGGCCTGGATGCCTGAACCGCGAGGCCATCACTGGTAT
CCTTGTCTCGTGATGCTGTC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: GSP39 [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFDEFQGKRILVTGASTGIGAAVAKRFGALGAHVAVHYNTSEAPAREVVEAIERAGGQAFTLQQDVSTAEGAVDVVDRAA
ERLGGLDILVNNAGDMLGRVPAGDIEAAHYARVMDLNVRSVTLATRAALAHFRRQGEGGNIINTTSVAARNGGGPGASLY
ASAKAFVSSFTRGMAKELAGDGVRVNAVAPGVIVTPFHDRHSSDAQLEAMRAGIPMGRLGTPEECVGAFLFLASDAMSGY
VTGQILEVNGGQLMP

Sequences:

>Translated_255_residues
MFDEFQGKRILVTGASTGIGAAVAKRFGALGAHVAVHYNTSEAPAREVVEAIERAGGQAFTLQQDVSTAEGAVDVVDRAA
ERLGGLDILVNNAGDMLGRVPAGDIEAAHYARVMDLNVRSVTLATRAALAHFRRQGEGGNIINTTSVAARNGGGPGASLY
ASAKAFVSSFTRGMAKELAGDGVRVNAVAPGVIVTPFHDRHSSDAQLEAMRAGIPMGRLGTPEECVGAFLFLASDAMSGY
VTGQILEVNGGQLMP
>Mature_255_residues
MFDEFQGKRILVTGASTGIGAAVAKRFGALGAHVAVHYNTSEAPAREVVEAIERAGGQAFTLQQDVSTAEGAVDVVDRAA
ERLGGLDILVNNAGDMLGRVPAGDIEAAHYARVMDLNVRSVTLATRAALAHFRRQGEGGNIINTTSVAARNGGGPGASLY
ASAKAFVSSFTRGMAKELAGDGVRVNAVAPGVIVTPFHDRHSSDAQLEAMRAGIPMGRLGTPEECVGAFLFLASDAMSGY
VTGQILEVNGGQLMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=33.7254901960784, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=30.5882352941176, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI15277342, Length=256, Percent_Identity=33.59375, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=32.520325203252, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=31.1475409836066, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI10190704, Length=259, Percent_Identity=31.2741312741313, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=31.5789473684211, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=30.859375, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI66933014, Length=181, Percent_Identity=34.2541436464088, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI59889578, Length=222, Percent_Identity=31.0810810810811, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=33.1632653061224, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40254986, Length=191, Percent_Identity=28.7958115183246, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=32.994923857868, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4503301, Length=256, Percent_Identity=25.78125, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=29.7435897435897, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=31.9587628865979, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI32455239, Length=188, Percent_Identity=28.7234042553192, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI5031765, Length=188, Percent_Identity=28.7234042553192, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=37.1428571428571, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=37.2, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=32.6530612244898, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=37.6518218623482, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=36.6141732283465, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=32.8, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=33.4661354581673, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082100, Length=267, Percent_Identity=31.8352059925094, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=32.295719844358, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1786812, Length=271, Percent_Identity=32.4723247232472, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=31.0483870967742, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=30.6451612903226, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787891, Length=248, Percent_Identity=27.4193548387097, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=30.327868852459, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=33.5849056603774, Blast_Score=127, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=33.0855018587361, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=34.5238095238095, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=33.206106870229, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=32.824427480916, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=34.3511450381679, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=33.8345864661654, Blast_Score=115, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=30.6513409961686, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=30.5343511450382, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=262, Percent_Identity=32.824427480916, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=32.7137546468402, Blast_Score=111, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=34.3283582089552, Blast_Score=110, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=34.1269841269841, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=30.9160305343511, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=29.6992481203008, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=31.5789473684211, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=30.2325581395349, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=34.8178137651822, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=35.3658536585366, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=32.089552238806, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=30.4511278195489, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=28.4644194756554, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=29.0697674418605, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17565030, Length=273, Percent_Identity=30.03663003663, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=30.3149606299213, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=30.7086614173228, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17561272, Length=237, Percent_Identity=30.379746835443, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=31.7269076305221, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71982365, Length=199, Percent_Identity=28.643216080402, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=30.5882352941176, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193207185, Length=146, Percent_Identity=32.8767123287671, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17558628, Length=193, Percent_Identity=29.0155440414508, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=197, Percent_Identity=27.9187817258883, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=33.1632653061224, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=37.109375, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI28571526, Length=258, Percent_Identity=37.5968992248062, Blast_Score=124, Evalue=8e-29,
Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=36.9649805447471, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=34.8837209302326, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=32.3886639676113, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=36.1111111111111, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=36.046511627907, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24643142, Length=252, Percent_Identity=31.3492063492063, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21357673, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24641232, Length=210, Percent_Identity=28.0952380952381, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281364494, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=26.0700389105058, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648693, Length=216, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21355889, Length=216, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI116007234, Length=202, Percent_Identity=27.2277227722772, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24641388, Length=209, Percent_Identity=28.2296650717703, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26350; Mature: 26350

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MFDEFQGKRILVTGASTGIGAAVAKRFGALGAHVAVHYNTSEAPAREVVEAIERAGGQAF
CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEE
TLQQDVSTAEGAVDVVDRAAERLGGLDILVNNAGDMLGRVPAGDIEAAHYARVMDLNVRS
EEHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCHHHHHEEEECCCHH
VTLATRAALAHFRRQGEGGNIINTTSVAARNGGGPGASLYASAKAFVSSFTRGMAKELAG
HHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DGVRVNAVAPGVIVTPFHDRHSSDAQLEAMRAGIPMGRLGTPEECVGAFLFLASDAMSGY
CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCE
VTGQILEVNGGQLMP
EEEEEEEECCCCCCC
>Mature Secondary Structure
MFDEFQGKRILVTGASTGIGAAVAKRFGALGAHVAVHYNTSEAPAREVVEAIERAGGQAF
CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEE
TLQQDVSTAEGAVDVVDRAAERLGGLDILVNNAGDMLGRVPAGDIEAAHYARVMDLNVRS
EEHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCCCCHHHHHEEEECCCHH
VTLATRAALAHFRRQGEGGNIINTTSVAARNGGGPGASLYASAKAFVSSFTRGMAKELAG
HHHHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DGVRVNAVAPGVIVTPFHDRHSSDAQLEAMRAGIPMGRLGTPEECVGAFLFLASDAMSGY
CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCE
VTGQILEVNGGQLMP
EEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]