Click here to switch to the map view.

The map label for this gene is gfcE [H]

Identifier: 92113835

GI number: 92113835

Start: 1948041

End: 1949201

Strand: Direct

Name: gfcE [H]

Synonym: Csal_1712

Alternate gene names: 92113835

Gene position: 1948041-1949201 (Clockwise)

Preceding gene: 92113834

Following gene: 92113836

Centisome position: 52.7

GC content: 61.93

Gene sequence:

>1161_bases
ATGACTTTACGCCGCAACGAGTCTCGTTCGGGATGGAGAAAGCCACTGCTGGGGCTTTCTTTCATGGTGGCGCTCTCGGG
CTGTGCGTTCGCACCCGGTGGGCATATCGATTATGACACGCAGGGGGAGGACCTTTCCGAGAACATCGAGGTCAAGCCGA
TCACGCCGAGCCTGGTCAAGACGATGGCGGCGAGCGGGGATGAGCTGCGCGAGTCGCTGTTCGAGTATGCCGAGAATGCC
GAGCCGCAGATGGAGGATCTCGATTACGACTACATGATCGGGCGCGGGGACGTGCTGGCGGTCGTCGTGTATGACCATCC
CGAACTGACGATTCCCGCCGGTAGCGAACGCAGTGCGGAAGAGTCGGGCAACGTGGTGCACTCGGACGGCACCATCTTCT
ATCCCTACATCGGTACGGTGGATGTCGCTGGACGCACCGTGCGCGATGTCCGCAGCGAGATTCAGCGCCGCCTCGAAGGC
TACATCGCTCAGCCTCAGGTGGACGTGAAGGTCGCCGCCTTCAATGCGCAGAAGGCGTACGTCACCGGCCAGGTCGAACG
TGCCGGTGCCCAGCCGATCACCAACATTCCGCTCACCGTGCTGGATGCCTTGAGCAACGTGGGGGGGCTGACCCAGGGCG
GCGACTGGCATGACGTCGTGCTCACGCGTGACGGCCAGGAGATCCACCTGTCGGTGTACGACATGCTGGTCAACGGCAAT
CTCGAACAGAACCTGTTGCTCCAGGATGGCGACGTGCTGCATGTGCCGGTGGTCGGCAACCAGCAGGTCTACGTGATGGG
CGAGGTCAATACGCCGACCGCGGTACCGATGCCGAACGAGCGTCTGTCGTTGACCAACGCCTTAGCCCAGGCCGGCGGCA
TCAACGAGAACAGCGCCGATGCCTCGGGGATCTTCGTGATTCGCCGCAATCACGATGTCGAAAGCGACACCTTCGCCACC
GTCTACCAGCTCAACGCCAAGAACGCGATCTCCTTCGTGCTGGGGTCGGAATTCATTCTGCAGCCCACCGATGTGGTGTA
TGTCACCGCCGCGCCGATTGCCCGCTGGAACCGCGTCATCAGCCAGATCCTGCCCAGCGTGACGGCGATCTACCAGCTGA
CGCAGGCCACGCGTGACATTCAGGACATCGACGATAACTAG

Upstream 100 bases:

>100_bases
TTTCGACAATTGACGGTTATGGCCCAGGAGATTCGGTGTCGCTCCAGGGCGGTAGCGTGGCCAAAACAATTATCTGATCA
CATTGAGTGAGGGAAACGGC

Downstream 100 bases:

>100_bases
TAAGCCGTCATTGTCTCGAGGCCGCCGCCGTCCGCCGCCAGGCGCCGGGGGCGGCCCTCGATACCCACATTCTCATGGAG
TGGGAATTCTATGAATCTCA

Product: polysaccharide export protein

Products: NA

Alternate protein names: Group 4 capsule protein E homolog [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTLRRNESRSGWRKPLLGLSFMVALSGCAFAPGGHIDYDTQGEDLSENIEVKPITPSLVKTMAASGDELRESLFEYAENA
EPQMEDLDYDYMIGRGDVLAVVVYDHPELTIPAGSERSAEESGNVVHSDGTIFYPYIGTVDVAGRTVRDVRSEIQRRLEG
YIAQPQVDVKVAAFNAQKAYVTGQVERAGAQPITNIPLTVLDALSNVGGLTQGGDWHDVVLTRDGQEIHLSVYDMLVNGN
LEQNLLLQDGDVLHVPVVGNQQVYVMGEVNTPTAVPMPNERLSLTNALAQAGGINENSADASGIFVIRRNHDVESDTFAT
VYQLNAKNAISFVLGSEFILQPTDVVYVTAAPIARWNRVISQILPSVTAIYQLTQATRDIQDIDDN

Sequences:

>Translated_386_residues
MTLRRNESRSGWRKPLLGLSFMVALSGCAFAPGGHIDYDTQGEDLSENIEVKPITPSLVKTMAASGDELRESLFEYAENA
EPQMEDLDYDYMIGRGDVLAVVVYDHPELTIPAGSERSAEESGNVVHSDGTIFYPYIGTVDVAGRTVRDVRSEIQRRLEG
YIAQPQVDVKVAAFNAQKAYVTGQVERAGAQPITNIPLTVLDALSNVGGLTQGGDWHDVVLTRDGQEIHLSVYDMLVNGN
LEQNLLLQDGDVLHVPVVGNQQVYVMGEVNTPTAVPMPNERLSLTNALAQAGGINENSADASGIFVIRRNHDVESDTFAT
VYQLNAKNAISFVLGSEFILQPTDVVYVTAAPIARWNRVISQILPSVTAIYQLTQATRDIQDIDDN
>Mature_385_residues
TLRRNESRSGWRKPLLGLSFMVALSGCAFAPGGHIDYDTQGEDLSENIEVKPITPSLVKTMAASGDELRESLFEYAENAE
PQMEDLDYDYMIGRGDVLAVVVYDHPELTIPAGSERSAEESGNVVHSDGTIFYPYIGTVDVAGRTVRDVRSEIQRRLEGY
IAQPQVDVKVAAFNAQKAYVTGQVERAGAQPITNIPLTVLDALSNVGGLTQGGDWHDVVLTRDGQEIHLSVYDMLVNGNL
EQNLLLQDGDVLHVPVVGNQQVYVMGEVNTPTAVPMPNERLSLTNALAQAGGINENSADASGIFVIRRNHDVESDTFATV
YQLNAKNAISFVLGSEFILQPTDVVYVTAAPIARWNRVISQILPSVTAIYQLTQATRDIQDIDDN

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=368, Percent_Identity=45.9239130434783, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1788376, Length=370, Percent_Identity=45.1351351351351, Blast_Score=323, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 42135; Mature: 42003

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRRNESRSGWRKPLLGLSFMVALSGCAFAPGGHIDYDTQGEDLSENIEVKPITPSLVK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHH
TMAASGDELRESLFEYAENAEPQMEDLDYDYMIGRGDVLAVVVYDHPELTIPAGSERSAE
HHHCCCHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCEEEEEEECCCCEEECCCCCCCHH
ESGNVVHSDGTIFYPYIGTVDVAGRTVRDVRSEIQRRLEGYIAQPQVDVKVAAFNAQKAY
HCCCEEECCCCEEEEECCEEECCCHHHHHHHHHHHHHHHCEECCCCCEEEEEEECCCEEE
VTGQVERAGAQPITNIPLTVLDALSNVGGLTQGGDWHDVVLTRDGQEIHLSVYDMLVNGN
EEEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCC
LEQNLLLQDGDVLHVPVVGNQQVYVMGEVNTPTAVPMPNERLSLTNALAQAGGINENSAD
CCCCEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
ASGIFVIRRNHDVESDTFATVYQLNAKNAISFVLGSEFILQPTDVVYVTAAPIARWNRVI
CCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCEEECCCCEEEEECCCHHHHHHHH
SQILPSVTAIYQLTQATRDIQDIDDN
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLRRNESRSGWRKPLLGLSFMVALSGCAFAPGGHIDYDTQGEDLSENIEVKPITPSLVK
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHH
TMAASGDELRESLFEYAENAEPQMEDLDYDYMIGRGDVLAVVVYDHPELTIPAGSERSAE
HHHCCCHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCEEEEEEECCCCEEECCCCCCCHH
ESGNVVHSDGTIFYPYIGTVDVAGRTVRDVRSEIQRRLEGYIAQPQVDVKVAAFNAQKAY
HCCCEEECCCCEEEEECCEEECCCHHHHHHHHHHHHHHHCEECCCCCEEEEEEECCCEEE
VTGQVERAGAQPITNIPLTVLDALSNVGGLTQGGDWHDVVLTRDGQEIHLSVYDMLVNGN
EEEEHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEEECCC
LEQNLLLQDGDVLHVPVVGNQQVYVMGEVNTPTAVPMPNERLSLTNALAQAGGINENSAD
CCCCEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
ASGIFVIRRNHDVESDTFATVYQLNAKNAISFVLGSEFILQPTDVVYVTAAPIARWNRVI
CCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCEEECCCCEEEEECCCHHHHHHHH
SQILPSVTAIYQLTQATRDIQDIDDN
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]