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The map label for this gene is wcaJ [H]

Identifier: 92113834

GI number: 92113834

Start: 1945959

End: 1947386

Strand: Direct

Name: wcaJ [H]

Synonym: Csal_1711

Alternate gene names: 92113834

Gene position: 1945959-1947386 (Clockwise)

Preceding gene: 92113828

Following gene: 92113835

Centisome position: 52.64

GC content: 63.66

Gene sequence:

>1428_bases
ATGTTCGACAAGCATAAAGTGTTCGACCAGCTGGATCGTTCCGCGTGGGTGGGCAGCGAGTCGTTATTGACGTCTCGGGA
AGCGCCCGAGGCGTTTTACGAACGTCGACATTCGCGGTGGTACGAGCAATGCCTGATGGGCATGCCGTGTCAGTGGCTGA
TCGGTCTGCCCGTGGTATTGGCGGTCCCGGCACTGGTGACGCATGGCGTGGGCTTCTGGCGGGCGATGCCGCCTGCCCTG
GAAACGACGCTCTGGGCCATCGCGGTGGCCTTCGCGGTATCGCTGTTCGTGTTGCAGCGCTTGACCCGATTTCCCGGCAC
GCAGGCCTCGGTGTACGTGCTGCCGGTGGTGACGGTGGTCTACGCCCTGGTGCTGGCCGTGCTGATGAATGCCTATGCGT
ATCAGGTACCGGTCTTCCTGGGCGGTTATGCGGTCAGCGTGCTGTGGTTCTTCGCCGGGTATGCCTGGTTGCGGCGCTTT
CAACGACCCTTGCTGGCGGTGGTCCCGGTGGGCGAGGCCAAGCGCCTGAGCCAGGCGGAAGGCGTCGATCTCACCCTGCT
GTCATCCCCCAACCTGAATGGCCTGCGCGTGGACGGCGTGGTGGCGGATCTGCATAGCTTCTCGCCGTTGCCGGGCGAGG
TGCTGCAGCCCGCCGACGAGTTGCGCCAGCGCGATAACGCGAGCTCGGTGTCGGCCCAGAATGCCCAGTGGGCACGTTTT
CTCACCAAGTGCACCTTGCATGGCATTCCCGTCTATCAGATCAAGCAGCTCGACGAGTCGCATACCGGGCGCGTGCACCT
CGATCATCTGGCGGAGACCGAGTTCACCGCGTTGACGCCGTCGCCGCTGTACAGCCTGCTCAAGCGAGGCATGGATCTGG
CCGGTGCACTGCTGCTACTGCCGCTATTGGCACCGATCATGCTCGCCACGGCGTGGGCGATTCGCCGCGACAGCCCGGGG
CCGGCGTTGTTCGTGCAGTGGCGAATGGGCCATCGCGGCCGGCCGTTTCGCATCTACAAGTTCCGCAGCATGTACAGCGA
CCAGCGCGGCAAGGGCTTCACCTCCGGCGACGACGACCCGCGCATCACGCCGGTGGGGAGGGTGATCCGCAAGTACCGCC
TGGACGAGCTACCGCAACTGCTCAACGTGCTCAAGGGCGACATGAGTTTCATCGGCCCGCGCCCGGAGTCCATGGACCTC
TCCATGTGGTACGAGAAGGACGTCCCATTCTTCAGTTATCGCCATGTCGTCAAGCCCGGGATCTCGGGCTGGGCGCAGGT
GGAGCAGGGCTATGCCGCCGAGGTCGATGGCATGACCGTGAAGCTGCAGTACGACTTCTACTACATCAAGCATTTCTCGC
TATGGCTCGACCTGCTGATCGTGTTCCGCACCTTGAAGACGATCGGCACCGGTTTCGGCGCTCGCTGA

Upstream 100 bases:

>100_bases
GGATACACGGAGAGACACTTTGTAGCTTGTCTGGCAAATACCCGACTCTCTAGCGCCTCTTTTCATGGCGTCTCGGGGTC
ATCGAAAGGTGGCGTCAGAT

Downstream 100 bases:

>100_bases
GCGAACGCTCGGCGCGCTCGGTGGGGGCGCCGCCTCCGTTTTCCGACGGGGGCGTGCTTGCGTTTCTCTTTTTTCTCGTC
GTCGCGCATCGGTATGGCCG

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MFDKHKVFDQLDRSAWVGSESLLTSREAPEAFYERRHSRWYEQCLMGMPCQWLIGLPVVLAVPALVTHGVGFWRAMPPAL
ETTLWAIAVAFAVSLFVLQRLTRFPGTQASVYVLPVVTVVYALVLAVLMNAYAYQVPVFLGGYAVSVLWFFAGYAWLRRF
QRPLLAVVPVGEAKRLSQAEGVDLTLLSSPNLNGLRVDGVVADLHSFSPLPGEVLQPADELRQRDNASSVSAQNAQWARF
LTKCTLHGIPVYQIKQLDESHTGRVHLDHLAETEFTALTPSPLYSLLKRGMDLAGALLLLPLLAPIMLATAWAIRRDSPG
PALFVQWRMGHRGRPFRIYKFRSMYSDQRGKGFTSGDDDPRITPVGRVIRKYRLDELPQLLNVLKGDMSFIGPRPESMDL
SMWYEKDVPFFSYRHVVKPGISGWAQVEQGYAAEVDGMTVKLQYDFYYIKHFSLWLDLLIVFRTLKTIGTGFGAR

Sequences:

>Translated_475_residues
MFDKHKVFDQLDRSAWVGSESLLTSREAPEAFYERRHSRWYEQCLMGMPCQWLIGLPVVLAVPALVTHGVGFWRAMPPAL
ETTLWAIAVAFAVSLFVLQRLTRFPGTQASVYVLPVVTVVYALVLAVLMNAYAYQVPVFLGGYAVSVLWFFAGYAWLRRF
QRPLLAVVPVGEAKRLSQAEGVDLTLLSSPNLNGLRVDGVVADLHSFSPLPGEVLQPADELRQRDNASSVSAQNAQWARF
LTKCTLHGIPVYQIKQLDESHTGRVHLDHLAETEFTALTPSPLYSLLKRGMDLAGALLLLPLLAPIMLATAWAIRRDSPG
PALFVQWRMGHRGRPFRIYKFRSMYSDQRGKGFTSGDDDPRITPVGRVIRKYRLDELPQLLNVLKGDMSFIGPRPESMDL
SMWYEKDVPFFSYRHVVKPGISGWAQVEQGYAAEVDGMTVKLQYDFYYIKHFSLWLDLLIVFRTLKTIGTGFGAR
>Mature_475_residues
MFDKHKVFDQLDRSAWVGSESLLTSREAPEAFYERRHSRWYEQCLMGMPCQWLIGLPVVLAVPALVTHGVGFWRAMPPAL
ETTLWAIAVAFAVSLFVLQRLTRFPGTQASVYVLPVVTVVYALVLAVLMNAYAYQVPVFLGGYAVSVLWFFAGYAWLRRF
QRPLLAVVPVGEAKRLSQAEGVDLTLLSSPNLNGLRVDGVVADLHSFSPLPGEVLQPADELRQRDNASSVSAQNAQWARF
LTKCTLHGIPVYQIKQLDESHTGRVHLDHLAETEFTALTPSPLYSLLKRGMDLAGALLLLPLLAPIMLATAWAIRRDSPG
PALFVQWRMGHRGRPFRIYKFRSMYSDQRGKGFTSGDDDPRITPVGRVIRKYRLDELPQLLNVLKGDMSFIGPRPESMDL
SMWYEKDVPFFSYRHVVKPGISGWAQVEQGYAAEVDGMTVKLQYDFYYIKHFSLWLDLLIVFRTLKTIGTGFGAR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=376, Percent_Identity=30.8510638297872, Blast_Score=161, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 53572; Mature: 53572

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKHKVFDQLDRSAWVGSESLLTSREAPEAFYERRHSRWYEQCLMGMPCQWLIGLPVVL
CCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AVPALVTHGVGFWRAMPPALETTLWAIAVAFAVSLFVLQRLTRFPGTQASVYVLPVVTVV
HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YALVLAVLMNAYAYQVPVFLGGYAVSVLWFFAGYAWLRRFQRPLLAVVPVGEAKRLSQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCC
GVDLTLLSSPNLNGLRVDGVVADLHSFSPLPGEVLQPADELRQRDNASSVSAQNAQWARF
CCEEEEECCCCCCCEEECHHHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCCCCCHHHHHH
LTKCTLHGIPVYQIKQLDESHTGRVHLDHLAETEFTALTPSPLYSLLKRGMDLAGALLLL
HHHHHHCCCCHHHHHHCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH
PLLAPIMLATAWAIRRDSPGPALFVQWRMGHRGRPFRIYKFRSMYSDQRGKGFTSGDDDP
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCC
RITPVGRVIRKYRLDELPQLLNVLKGDMSFIGPRPESMDLSMWYEKDVPFFSYRHVVKPG
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCC
ISGWAQVEQGYAAEVDGMTVKLQYDFYYIKHFSLWLDLLIVFRTLKTIGTGFGAR
CCHHHHHHCCCCEEECCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFDKHKVFDQLDRSAWVGSESLLTSREAPEAFYERRHSRWYEQCLMGMPCQWLIGLPVVL
CCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AVPALVTHGVGFWRAMPPALETTLWAIAVAFAVSLFVLQRLTRFPGTQASVYVLPVVTVV
HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YALVLAVLMNAYAYQVPVFLGGYAVSVLWFFAGYAWLRRFQRPLLAVVPVGEAKRLSQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCC
GVDLTLLSSPNLNGLRVDGVVADLHSFSPLPGEVLQPADELRQRDNASSVSAQNAQWARF
CCEEEEECCCCCCCEEECHHHHHHHHCCCCCHHHHCCHHHHHHCCCCCCCCCCCHHHHHH
LTKCTLHGIPVYQIKQLDESHTGRVHLDHLAETEFTALTPSPLYSLLKRGMDLAGALLLL
HHHHHHCCCCHHHHHHCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHH
PLLAPIMLATAWAIRRDSPGPALFVQWRMGHRGRPFRIYKFRSMYSDQRGKGFTSGDDDP
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCC
RITPVGRVIRKYRLDELPQLLNVLKGDMSFIGPRPESMDLSMWYEKDVPFFSYRHVVKPG
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCC
ISGWAQVEQGYAAEVDGMTVKLQYDFYYIKHFSLWLDLLIVFRTLKTIGTGFGAR
CCHHHHHHCCCCEEECCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]