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The map label for this gene is yibD [C]

Identifier: 92113814

GI number: 92113814

Start: 1921147

End: 1921968

Strand: Direct

Name: yibD [C]

Synonym: Csal_1691

Alternate gene names: 92113814

Gene position: 1921147-1921968 (Clockwise)

Preceding gene: 92113813

Following gene: 92113815

Centisome position: 51.97

GC content: 37.83

Gene sequence:

>822_bases
GTGTTAAGCTATAAAGATGGCTTGGTAAGTGTGATTCTCCCTTTTTATAAAGCGGGGAAGTGGGCAGGTAGTATTGCGAA
ATCTATCGATATACAAAAAGAAGTAGAAGTCGAGATTTTCGTTATCGATGATGGGCTTGGTGAAGGCTTAGACTCTCTAG
TGAAAGAGCTTAGAAAGCTCGAAATCCCCTATAATGTTATATCAACGAGCGGGCACTGTGGCCCCGGTTATTCTAGAAAC
TTGGGGTTGGAGAAAAGTCAGGGTAGATATGTTGCTTTTTTAGATGCTGATGATGCTTGGCCATCAGGTTATTTGAAAAA
AAGTATTGATAAAATTCATAATGATTTTGCTTCATTAACCTATGTGGCTACAAAGTATTATGATGAAAATGGTAGATATA
TAAACTGTTCATCCCCCCCTAAAGCACTAAGTTTTTCTGAGCTTATACAGACTTGTCCTGTTTCTTTGCCAGGGGTGGTT
ATCGATAGGTATAAGACAGGAAGATTTGAGTTTAATATAACAGGCCACGAAGATTATCAGCTTTGGCTTGAGTTTTCTAG
CAATGGGCATTCTTTGGTTTTGGTGGAGGATGCTCATGTGAAGGTTACGCGTGCTGCTAAGTCAGCTTCATCAAATAAGT
TTAAAGCTGTTTCTTGGCAATGGAATGCTATAAAAAAATACAGCAATTCACGTTTTATTCTAAGAGTTGTTTTTCTATTT
GTTTATTTGGTGAATGCGGTATTGAAAAGAAAGTGCAAGCTATATAAGCCTGTTTACCTCCCCTTTAACATTTCTGCCAG
TTTAAAAAAGGAAGATGCATGA

Upstream 100 bases:

>100_bases
TGCGGAATACCTGTTATGGAAACTTATGAAAATATTAAAAAAGAGAGATCTCCTGAGATGGTGTCTAAAAAATTAGAGAA
GATTTTAGAGAAGGTCTAAC

Downstream 100 bases:

>100_bases
TCGTTCCCGTAATACTTGCAGGTGGTGCTGGATCAAGGTTATGGCCATTATCAAGAAGTCAGCATCCCAAGCAATTTATG
CCATTGATTGATAATAACTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLSYKDGLVSVILPFYKAGKWAGSIAKSIDIQKEVEVEIFVIDDGLGEGLDSLVKELRKLEIPYNVISTSGHCGPGYSRN
LGLEKSQGRYVAFLDADDAWPSGYLKKSIDKIHNDFASLTYVATKYYDENGRYINCSSPPKALSFSELIQTCPVSLPGVV
IDRYKTGRFEFNITGHEDYQLWLEFSSNGHSLVLVEDAHVKVTRAAKSASSNKFKAVSWQWNAIKKYSNSRFILRVVFLF
VYLVNAVLKRKCKLYKPVYLPFNISASLKKEDA

Sequences:

>Translated_273_residues
MLSYKDGLVSVILPFYKAGKWAGSIAKSIDIQKEVEVEIFVIDDGLGEGLDSLVKELRKLEIPYNVISTSGHCGPGYSRN
LGLEKSQGRYVAFLDADDAWPSGYLKKSIDKIHNDFASLTYVATKYYDENGRYINCSSPPKALSFSELIQTCPVSLPGVV
IDRYKTGRFEFNITGHEDYQLWLEFSSNGHSLVLVEDAHVKVTRAAKSASSNKFKAVSWQWNAIKKYSNSRFILRVVFLF
VYLVNAVLKRKCKLYKPVYLPFNISASLKKEDA
>Mature_273_residues
MLSYKDGLVSVILPFYKAGKWAGSIAKSIDIQKEVEVEIFVIDDGLGEGLDSLVKELRKLEIPYNVISTSGHCGPGYSRN
LGLEKSQGRYVAFLDADDAWPSGYLKKSIDKIHNDFASLTYVATKYYDENGRYINCSSPPKALSFSELIQTCPVSLPGVV
IDRYKTGRFEFNITGHEDYQLWLEFSSNGHSLVLVEDAHVKVTRAAKSASSNKFKAVSWQWNAIKKYSNSRFILRVVFLF
VYLVNAVLKRKCKLYKPVYLPFNISASLKKEDA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 30767; Mature: 30767

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYKDGLVSVILPFYKAGKWAGSIAKSIDIQKEVEVEIFVIDDGLGEGLDSLVKELRKL
CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHH
EIPYNVISTSGHCGPGYSRNLGLEKSQGRYVAFLDADDAWPSGYLKKSIDKIHNDFASLT
CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
YVATKYYDENGRYINCSSPPKALSFSELIQTCPVSLPGVVIDRYKTGRFEFNITGHEDYQ
EEEEEEECCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEECEECCEEEEEECCCCCEE
LWLEFSSNGHSLVLVEDAHVKVTRAAKSASSNKFKAVSWQWNAIKKYSNSRFILRVVFLF
EEEEECCCCCEEEEEECCCEEEEEHHHCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHH
VYLVNAVLKRKCKLYKPVYLPFNISASLKKEDA
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLSYKDGLVSVILPFYKAGKWAGSIAKSIDIQKEVEVEIFVIDDGLGEGLDSLVKELRKL
CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHH
EIPYNVISTSGHCGPGYSRNLGLEKSQGRYVAFLDADDAWPSGYLKKSIDKIHNDFASLT
CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
YVATKYYDENGRYINCSSPPKALSFSELIQTCPVSLPGVVIDRYKTGRFEFNITGHEDYQ
EEEEEEECCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEECEECCEEEEEECCCCCEE
LWLEFSSNGHSLVLVEDAHVKVTRAAKSASSNKFKAVSWQWNAIKKYSNSRFILRVVFLF
EEEEECCCCCEEEEEECCCEEEEEHHHCCCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHH
VYLVNAVLKRKCKLYKPVYLPFNISASLKKEDA
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]