Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
---|---|
Accession | NC_007963 |
Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is 92112295
Identifier: 92112295
GI number: 92112295
Start: 183976
End: 184728
Strand: Direct
Name: 92112295
Synonym: Csal_0160
Alternate gene names: NA
Gene position: 183976-184728 (Clockwise)
Preceding gene: 92112294
Following gene: 92112296
Centisome position: 4.98
GC content: 69.46
Gene sequence:
>753_bases GTGCCCCCGACGTTACCTACGCTTGTCGCCGCGATGAGCCTCGCGCTCTTGGCGGGGGGCGTGCGCGGGTATTGCGGCTT CGGGTTCGCCATGCTGCTCGCACTTGGCTTGACGCTGTTCATGCCGCCCATTCAGGCCGTGCCGTTGGCGTTGCTGCTGG ACCTCGTCACGAGCCTGGGGTTGTGGCGACGTGCCCTGCGTCATGCCGATTGGCCTTGCCTGCGTCCGTTGGTGCTGGGC ATGGCGATGGCGACCGGGCTCGGCGTGTGGCTGCTGGCGAGCGTACCGGCCGTGCCGATGCGCATCGTCGTCGCGCTGTT GGCGCTGAGCGGTGCCGTGGCCCTGCTCTGCCAGCGGGATGTCGCCGCGCCCGGTCGCGGTGCGCAAGCGCGTGGCGTGG TGCTTGGCGCGGGCGGACTCTCGGGACTGTGCATGACGCTGGCCTCCTCGGGCGGGCCGCCGTTGATGCTGTATCTGCTG TATCGCCGCATGCCATCGCTTTCGGCGCGTGCCACGGCCATCGTTTTCTTCGCCGCCAGCAGTAGCGCCTCCCTGCTCGG GTTGGGGCTGGCCGGTGCTCTGACGGCCGGCACCTGGCAATGGGCGGCATGGCTACTGCTACCGGCCCTGCTCGGCAATG CCCTGGGCCAGTGGCGCTTCGAACGCGCGCCGCCGCGCTCGCTCAAGTTCAGCGTCGCGCCACTGTTGATCGCGCTCTCG CTGTGGGTACTGCTTCGCGAGGCGATTGGCTGA
Upstream 100 bases:
>100_bases GGATGTCCCATCGAGGCGCCGCAACTGGCCCTACCGTGGCATTCACGGCCTTGGATAGGCTGCGGTGCCAGTGATTCATT CCCGTTTCCGAGGAGTCGCC
Downstream 100 bases:
>100_bases CGCGTCATCATCATCACGACAAGAGGAAATCGGCATGACGGATTGTGTCTTCATCACCGGTGCGACGTCCGGGTTCGGCC GCGCCGCTGCGCATCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPPTLPTLVAAMSLALLAGGVRGYCGFGFAMLLALGLTLFMPPIQAVPLALLLDLVTSLGLWRRALRHADWPCLRPLVLG MAMATGLGVWLLASVPAVPMRIVVALLALSGAVALLCQRDVAAPGRGAQARGVVLGAGGLSGLCMTLASSGGPPLMLYLL YRRMPSLSARATAIVFFAASSSASLLGLGLAGALTAGTWQWAAWLLLPALLGNALGQWRFERAPPRSLKFSVAPLLIALS LWVLLREAIG
Sequences:
>Translated_250_residues MPPTLPTLVAAMSLALLAGGVRGYCGFGFAMLLALGLTLFMPPIQAVPLALLLDLVTSLGLWRRALRHADWPCLRPLVLG MAMATGLGVWLLASVPAVPMRIVVALLALSGAVALLCQRDVAAPGRGAQARGVVLGAGGLSGLCMTLASSGGPPLMLYLL YRRMPSLSARATAIVFFAASSSASLLGLGLAGALTAGTWQWAAWLLLPALLGNALGQWRFERAPPRSLKFSVAPLLIALS LWVLLREAIG >Mature_249_residues PPTLPTLVAAMSLALLAGGVRGYCGFGFAMLLALGLTLFMPPIQAVPLALLLDLVTSLGLWRRALRHADWPCLRPLVLGM AMATGLGVWLLASVPAVPMRIVVALLALSGAVALLCQRDVAAPGRGAQARGVVLGAGGLSGLCMTLASSGGPPLMLYLLY RRMPSLSARATAIVFFAASSSASLLGLGLAGALTAGTWQWAAWLLLPALLGNALGQWRFERAPPRSLKFSVAPLLIALSL WVLLREAIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25969; Mature: 25838
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTLPTLVAAMSLALLAGGVRGYCGFGFAMLLALGLTLFMPPIQAVPLALLLDLVTSLG CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LWRRALRHADWPCLRPLVLGMAMATGLGVWLLASVPAVPMRIVVALLALSGAVALLCQRD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VAAPGRGAQARGVVLGAGGLSGLCMTLASSGGPPLMLYLLYRRMPSLSARATAIVFFAAS CCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHEEEEEEECC SSASLLGLGLAGALTAGTWQWAAWLLLPALLGNALGQWRFERAPPRSLKFSVAPLLIALS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LWVLLREAIG HHHHHHHHHC >Mature Secondary Structure PPTLPTLVAAMSLALLAGGVRGYCGFGFAMLLALGLTLFMPPIQAVPLALLLDLVTSLG CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LWRRALRHADWPCLRPLVLGMAMATGLGVWLLASVPAVPMRIVVALLALSGAVALLCQRD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH VAAPGRGAQARGVVLGAGGLSGLCMTLASSGGPPLMLYLLYRRMPSLSARATAIVFFAAS CCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHEEEEEEECC SSASLLGLGLAGALTAGTWQWAAWLLLPALLGNALGQWRFERAPPRSLKFSVAPLLIALS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH LWVLLREAIG HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA