Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
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Accession | NC_007963 |
Length | 3,696,649 |
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The map label for this gene is 92112287
Identifier: 92112287
GI number: 92112287
Start: 173556
End: 174971
Strand: Direct
Name: 92112287
Synonym: Csal_0152
Alternate gene names: NA
Gene position: 173556-174971 (Clockwise)
Preceding gene: 92112285
Following gene: 92112292
Centisome position: 4.69
GC content: 66.88
Gene sequence:
>1416_bases ATGCAAGAGACGGATCTGGGCATGATGGATGCCGGGCAGTTGACCGCGTTGTTCGAATCGGGGGAGGCTTCGCCGCTGGA AGCAACGCGGGCCGCCCTATCGCGTATCGAACGCTTCAATGATGCCGTCAACGCCTATGTCCACGTGGACCACGAAGGCG CCGAGCAAGCCGCCAAGGCGTCGGCGCGTCGCTGGGGACAGGGCAAGCCGCTGAGCCCCATCGACGGGATGCCGGTGTCG ATGAAGGATTTGACCGAAGTGGCCGGCATGCCGGCCCGCGATGGATCGCTGACGTCCAAAGAGACGCCCTGCGAGCATGA CGCACCGCCGGCGCGCATGCTGCGCGAGGCGGGCGCCATCTTTCTGGGCAAGACCAATACCCCCGAGTTCGGCTGGAAAG CCGTCACCGACAACCGCGTGTTCGGTGCCACCTACAATCCATGGGACACGCGGCTGACGCCGGGCGGTTCCTCCGGCGGC GCGGCCGCTGCCGCCGCTCTCAACATGGGCGTTTTGCACCAGGGCGGCGATTCGGGTGGTTCGATCCGCATTCCCGCCGC CTTCACCGGCGTGTTCGGTTTCAAGCCGACCTTCGGCTGGACGCCGCAATGGCCGCCCGCCACGGAACCCTCGCTCTCGC ATATCGGTCCGTTGACGCGCAACGTGCCGGACGCTGCGCGCATGCTCAACGTGATCGGCCGTTACGATTACCGCGACCCG TACGCCACGCGCGGTCAGCCCGACGACTGGGGCGTGGACCTGGATTGCGACCTGCGCGGCCTGCGCATCGCCTACTCGCC GGATCTCGGCTACGCCCAGGTCGAACCGCAGATCGCCGCCCGCGTGCGCGAGGCGGCCGAGAAGCTCCAGGCTCTGGGGG CCGAGGTCGAGGAAATCCATCCCGGTTTCGAGTCGCCGATCGCGATCTTCCAGCAACTGTGGTTCACCGCCTCGCTGGAG GTGTGGTCGCGATCCACCGAGCACGAGCGCACCCTGCTCGACCCCGGGCTGGTGGCCAATGCGCGTATCGCCGAGCGCTG GAGTGCACTGGATTTCTTCCGCGCTCTCGAGGCACGTGCTCGTCTGACCCAGCGGCTCGAACACTTCAATCAGAAGTATC ATCTGTTGATGACGCCCTCGGTGGCGGTGTCGCCGTTCGAGGCCAATCACGAAGTACCGCCGGGCAGCGGCATGCAGGAC TGGGAGGAATGGGCGCCGTTCTCGTATCCCTTCAACCTCAGCCAGCAACCCGCCGCCTCCGTGCCGTGCGGCTTCACCGA CGCGGGCATGCCGGTGGGTTTCCAGCTTGCCGGGGGCAAGTTCGACGATATCCGCGTGCTGCGCGCCTGCCACGCCTTCA TGCAGGCGCATCCGCCGCGTTTCCCGACGGTGCCCGACCCTGCCCAGCAAGGCTGA
Upstream 100 bases:
>100_bases GCGCTGCTCCACTCGCGTTGCCTTGCAGGGGTGACGCGTCTAGCCTAGGCCTCTGACACGCAATCGCGTGCCATTCACCA AACAGGGATGTGAGGGTGTC
Downstream 100 bases:
>100_bases ACCGTGCGCCCGTGGCCCTCGCCGGCTCAGGCCGGCGAGGGCGTGTCGTGATTCTCGAGGAACCGGCGCACGCGGTCGGT CCGGGGCGCAGTGAAGAAGG
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MQETDLGMMDAGQLTALFESGEASPLEATRAALSRIERFNDAVNAYVHVDHEGAEQAAKASARRWGQGKPLSPIDGMPVS MKDLTEVAGMPARDGSLTSKETPCEHDAPPARMLREAGAIFLGKTNTPEFGWKAVTDNRVFGATYNPWDTRLTPGGSSGG AAAAAALNMGVLHQGGDSGGSIRIPAAFTGVFGFKPTFGWTPQWPPATEPSLSHIGPLTRNVPDAARMLNVIGRYDYRDP YATRGQPDDWGVDLDCDLRGLRIAYSPDLGYAQVEPQIAARVREAAEKLQALGAEVEEIHPGFESPIAIFQQLWFTASLE VWSRSTEHERTLLDPGLVANARIAERWSALDFFRALEARARLTQRLEHFNQKYHLLMTPSVAVSPFEANHEVPPGSGMQD WEEWAPFSYPFNLSQQPAASVPCGFTDAGMPVGFQLAGGKFDDIRVLRACHAFMQAHPPRFPTVPDPAQQG
Sequences:
>Translated_471_residues MQETDLGMMDAGQLTALFESGEASPLEATRAALSRIERFNDAVNAYVHVDHEGAEQAAKASARRWGQGKPLSPIDGMPVS MKDLTEVAGMPARDGSLTSKETPCEHDAPPARMLREAGAIFLGKTNTPEFGWKAVTDNRVFGATYNPWDTRLTPGGSSGG AAAAAALNMGVLHQGGDSGGSIRIPAAFTGVFGFKPTFGWTPQWPPATEPSLSHIGPLTRNVPDAARMLNVIGRYDYRDP YATRGQPDDWGVDLDCDLRGLRIAYSPDLGYAQVEPQIAARVREAAEKLQALGAEVEEIHPGFESPIAIFQQLWFTASLE VWSRSTEHERTLLDPGLVANARIAERWSALDFFRALEARARLTQRLEHFNQKYHLLMTPSVAVSPFEANHEVPPGSGMQD WEEWAPFSYPFNLSQQPAASVPCGFTDAGMPVGFQLAGGKFDDIRVLRACHAFMQAHPPRFPTVPDPAQQG >Mature_471_residues MQETDLGMMDAGQLTALFESGEASPLEATRAALSRIERFNDAVNAYVHVDHEGAEQAAKASARRWGQGKPLSPIDGMPVS MKDLTEVAGMPARDGSLTSKETPCEHDAPPARMLREAGAIFLGKTNTPEFGWKAVTDNRVFGATYNPWDTRLTPGGSSGG AAAAAALNMGVLHQGGDSGGSIRIPAAFTGVFGFKPTFGWTPQWPPATEPSLSHIGPLTRNVPDAARMLNVIGRYDYRDP YATRGQPDDWGVDLDCDLRGLRIAYSPDLGYAQVEPQIAARVREAAEKLQALGAEVEEIHPGFESPIAIFQQLWFTASLE VWSRSTEHERTLLDPGLVANARIAERWSALDFFRALEARARLTQRLEHFNQKYHLLMTPSVAVSPFEANHEVPPGSGMQD WEEWAPFSYPFNLSQQPAASVPCGFTDAGMPVGFQLAGGKFDDIRVLRACHAFMQAHPPRFPTVPDPAQQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI195972892, Length=483, Percent_Identity=24.4306418219462, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI222831590, Length=508, Percent_Identity=27.1653543307087, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI166795287, Length=235, Percent_Identity=28.5106382978723, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17537465, Length=490, Percent_Identity=26.1224489795918, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17556264, Length=300, Percent_Identity=33.6666666666667, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71990152, Length=293, Percent_Identity=29.3515358361775, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17538252, Length=323, Percent_Identity=29.1021671826625, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17556276, Length=298, Percent_Identity=28.5234899328859, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17556278, Length=298, Percent_Identity=28.5234899328859, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538254, Length=314, Percent_Identity=27.3885350318471, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17543272, Length=437, Percent_Identity=23.7986270022883, Blast_Score=82, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6319685, Length=402, Percent_Identity=26.3681592039801, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6320448, Length=226, Percent_Identity=32.3008849557522, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323950, Length=472, Percent_Identity=22.8813559322034, Blast_Score=76, Evalue=9e-15, Organism=Drosophila melanogaster, GI24644968, Length=480, Percent_Identity=24.375, Blast_Score=115, Evalue=9e-26, Organism=Drosophila melanogaster, GI21356731, Length=464, Percent_Identity=26.5086206896552, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI45550774, Length=235, Percent_Identity=31.9148936170213, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24648435, Length=235, Percent_Identity=31.9148936170213, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24648437, Length=235, Percent_Identity=31.9148936170213, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24648113, Length=489, Percent_Identity=25.3578732106339, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI161078093, Length=325, Percent_Identity=27.0769230769231, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI24648441, Length=168, Percent_Identity=36.3095238095238, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24648439, Length=168, Percent_Identity=36.3095238095238, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24652985, Length=314, Percent_Identity=28.9808917197452, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI19922090, Length=314, Percent_Identity=28.9808917197452, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24652981, Length=314, Percent_Identity=28.9808917197452, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24652983, Length=314, Percent_Identity=28.9808917197452, Blast_Score=96, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 51294; Mature: 51294
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQETDLGMMDAGQLTALFESGEASPLEATRAALSRIERFNDAVNAYVHVDHEGAEQAAKA CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHH SARRWGQGKPLSPIDGMPVSMKDLTEVAGMPARDGSLTSKETPCEHDAPPARMLREAGAI HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE FLGKTNTPEFGWKAVTDNRVFGATYNPWDTRLTPGGSSGGAAAAAALNMGVLHQGGDSGG EEECCCCCCCCCEEECCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHEECCCCCCC SIRIPAAFTGVFGFKPTFGWTPQWPPATEPSLSHIGPLTRNVPDAARMLNVIGRYDYRDP EEECCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHCCCCHHHHHHHHHHCCCCCCC YATRGQPDDWGVDLDCDLRGLRIAYSPDLGYAQVEPQIAARVREAAEKLQALGAEVEEIH CCCCCCCCCCCEEECCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHCCCHHHHC PGFESPIAIFQQLWFTASLEVWSRSTEHERTLLDPGLVANARIAERWSALDFFRALEARA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLTQRLEHFNQKYHLLMTPSVAVSPFEANHEVPPGSGMQDWEEWAPFSYPFNLSQQPAAS HHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC VPCGFTDAGMPVGFQLAGGKFDDIRVLRACHAFMQAHPPRFPTVPDPAQQG CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQETDLGMMDAGQLTALFESGEASPLEATRAALSRIERFNDAVNAYVHVDHEGAEQAAKA CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHH SARRWGQGKPLSPIDGMPVSMKDLTEVAGMPARDGSLTSKETPCEHDAPPARMLREAGAI HHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCE FLGKTNTPEFGWKAVTDNRVFGATYNPWDTRLTPGGSSGGAAAAAALNMGVLHQGGDSGG EEECCCCCCCCCEEECCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHHEECCCCCCC SIRIPAAFTGVFGFKPTFGWTPQWPPATEPSLSHIGPLTRNVPDAARMLNVIGRYDYRDP EEECCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHCCCCHHHHHHHHHHCCCCCCC YATRGQPDDWGVDLDCDLRGLRIAYSPDLGYAQVEPQIAARVREAAEKLQALGAEVEEIH CCCCCCCCCCCEEECCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHCCCHHHHC PGFESPIAIFQQLWFTASLEVWSRSTEHERTLLDPGLVANARIAERWSALDFFRALEARA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLTQRLEHFNQKYHLLMTPSVAVSPFEANHEVPPGSGMQDWEEWAPFSYPFNLSQQPAAS HHHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC VPCGFTDAGMPVGFQLAGGKFDDIRVLRACHAFMQAHPPRFPTVPDPAQQG CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]