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The map label for this gene is traD [H]

Identifier: 92109773

GI number: 92109773

Start: 120800

End: 121015

Strand: Reverse

Name: traD [H]

Synonym: Nham_4673

Alternate gene names: 92109773

Gene position: 121015-120800 (Counterclockwise)

Preceding gene: 92109774

Following gene: 92109772

Centisome position: 99.68

GC content: 65.74

Gene sequence:

>216_bases
ATGCGCCGCTCCGATTCCGTTGAGGCCCGCAAGAAGGACACGCGCGAGAAGATCGAGCTCGGCGGCCTGATCGCCAAGGC
TGGCTTGCGCTACGAAAAGCGTGCGCTGCTGCTGGGCCTGTTGATCGATGCCGCCGACCGTCTGCGCGGCAACGAGGCGG
AGCACGAGCGCCTGACGGCAATCGGCGCAAAGGCGTTCGGCCATGAAGGCACGTAA

Upstream 100 bases:

>100_bases
GTAGCGAGCAGGTTTCGCAAAAGCGGCGGCCGGACGTCGAAGGCGGCCACGGGCGTCGCATCTGGCGCGTCTGCGGGCGC
GCCTCAAGAGGGCTGAGCGG

Downstream 100 bases:

>100_bases
GATCGCCCTCGCGATTGCGCCGGCCATCCTCATGGCGGTGCTGTGCCTCGCCACGACCGGTGCGGAATCGTGGCTGGCGC
GGTTCGGAACGACGCCGGGC

Product: conjugal transfer TraD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MRRSDSVEARKKDTREKIELGGLIAKAGLRYEKRALLLGLLIDAADRLRGNEAEHERLTAIGAKAFGHEGT

Sequences:

>Translated_71_residues
MRRSDSVEARKKDTREKIELGGLIAKAGLRYEKRALLLGLLIDAADRLRGNEAEHERLTAIGAKAFGHEGT
>Mature_71_residues
MRRSDSVEARKKDTREKIELGGLIAKAGLRYEKRALLLGLLIDAADRLRGNEAEHERLTAIGAKAFGHEGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009444 [H]

Pfam domain/function: PF06412 TraD [H]

EC number: NA

Molecular weight: Translated: 7844; Mature: 7844

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSDSVEARKKDTREKIELGGLIAKAGLRYEKRALLLGLLIDAADRLRGNEAEHERLTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IGAKAFGHEGT
HHHHHCCCCCC
>Mature Secondary Structure
MRRSDSVEARKKDTREKIELGGLIAKAGLRYEKRALLLGLLIDAADRLRGNEAEHERLTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IGAKAFGHEGT
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]