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The map label for this gene is traC [H]

Identifier: 92109774

GI number: 92109774

Start: 121020

End: 121280

Strand: Reverse

Name: traC [H]

Synonym: Nham_4674

Alternate gene names: 92109774

Gene position: 121280-121020 (Counterclockwise)

Preceding gene: NA

Following gene: 92109773

Centisome position: 99.89

GC content: 64.75

Gene sequence:

>261_bases
ATGAAAAAGCCATCGCGGCAGATCAGGGACGAAATCGCCCGGCTTCAGGAGCAATTGAAGCAGGCTGAAACGCGGGAGGC
CGAGAGGATCGGCCGCGTCGCGCTGAAGGCCGGACTGGGCGAGATCGAGATTGAAGAGACCATGCTGCTGTCGGCCTTCG
AGGAGGTAGCGAGCAGGTTTCGCAAAAGCGGCGGCCGGACGTCGAAGGCGGCCACGGGCGTCGCATCTGGCGCGTCTGCG
GGCGCGCCTCAAGAGGGCTGA

Upstream 100 bases:

>100_bases
GCTTCGCCGACCCCGTTAATTAACGGGGTCGCGCTCCGCGCTCTCCCGGGCTTTCCTGTCAGACGCTTCGCGCTGAAAAC
GACAGGAAAGGTCGTCCGGA

Downstream 100 bases:

>100_bases
GCGGATGCGCCGCTCCGATTCCGTTGAGGCCCGCAAGAAGGACACGCGCGAGAAGATCGAGCTCGGCGGCCTGATCGCCA
AGGCTGGCTTGCGCTACGAA

Product: conjugal transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRFRKSGGRTSKAATGVASGASA
GAPQEG

Sequences:

>Translated_86_residues
MKKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRFRKSGGRTSKAATGVASGASA
GAPQEG
>Mature_86_residues
MKKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRFRKSGGRTSKAATGVASGASA
GAPQEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012930 [H]

Pfam domain/function: PF07820 TraC [H]

EC number: NA

Molecular weight: Translated: 9243; Mature: 9243

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKSGGRTSKAATGVASGASAGAPQEG
HHCCCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKPSRQIRDEIARLQEQLKQAETREAERIGRVALKAGLGEIEIEETMLLSAFEEVASRF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKSGGRTSKAATGVASGASAGAPQEG
HHCCCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]