Definition | Nitrobacter hamburgensis X14 plasmid 3, complete sequence. |
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Accession | NC_007961 |
Length | 121,408 |
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The map label for this gene is yceA [C]
Identifier: 92109727
GI number: 92109727
Start: 74752
End: 75144
Strand: Reverse
Name: yceA [C]
Synonym: Nham_4620
Alternate gene names: 92109727
Gene position: 75144-74752 (Counterclockwise)
Preceding gene: 92109728
Following gene: 92109726
Centisome position: 61.89
GC content: 57.0
Gene sequence:
>393_bases ATGGCAACTAAGAGAGCGAAAGATCTGGTTGCGGAGGCTAACCGCAATGTCGAAACTCTGTCAGGTGCCGAAGCGGAAAA GCTCGTGAGCGACTCCGACGTGGTGTTCGTGGACATTCGCGAGTCCGACGAACTGCAAAAGACGGGCACCCTAAAAGGCG CCTTGCATGTACCGCGCGGGTTCCTCGAATTTCAAGCCGATCCTACCAGCCCTACTCACAAGCCGGAACTCGGCGGCGGC AAAAAGTTGGTGCTCTATTGCGGTTCCGGCAGCCGGTCTGCTTTGGGAGCCAACACTCTAATGGAGATGGGCATTATAAA CATCGCGCACGTGGCCGGTGGTTTCCCCGCTCTGCAACAAGCAGGCGCTCCATGCGAGGAGGCTAAGCAATGA
Upstream 100 bases:
>100_bases CATGCCAGCTCTCACGATTCGGGCATACTCACCGGCTGCAGCCCGAACCCGCTTGATGCTCGAGACCCAGTATCGCCCAA TCAAACCGAAGGAGACCATC
Downstream 100 bases:
>100_bases ACGATAGGATCAAGGGTGGAATGTGAAGGCGCGCTAGTGGATGGAATCTAACGCTTGGTGCCCGCGTCTGACAGCTCGGA TAATTTCGTTGGGATCAGCG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese Domain Protein Sulfur Transferase; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Metallo-Beta-Lactamase Superfamily Protein; Molybdopterin Biosynthesis Protein MoeB; Rhodanese-Like Domain Protein; Molybdopterin Biosynthesis Protein; Beta-Lactamase-Like; Rhodanese-Domain Protein; Rhodanese/Moeb/Thif Domain Protein; Bifunctional Glyoxylase/Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MATKRAKDLVAEANRNVETLSGAEAEKLVSDSDVVFVDIRESDELQKTGTLKGALHVPRGFLEFQADPTSPTHKPELGGG KKLVLYCGSGSRSALGANTLMEMGIINIAHVAGGFPALQQAGAPCEEAKQ
Sequences:
>Translated_130_residues MATKRAKDLVAEANRNVETLSGAEAEKLVSDSDVVFVDIRESDELQKTGTLKGALHVPRGFLEFQADPTSPTHKPELGGG KKLVLYCGSGSRSALGANTLMEMGIINIAHVAGGFPALQQAGAPCEEAKQ >Mature_129_residues ATKRAKDLVAEANRNVETLSGAEAEKLVSDSDVVFVDIRESDELQKTGTLKGALHVPRGFLEFQADPTSPTHKPELGGGK KLVLYCGSGSRSALGANTLMEMGIINIAHVAGGFPALQQAGAPCEEAKQ
Specific function: Unknown. [C]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13663; Mature: 13531
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKRAKDLVAEANRNVETLSGAEAEKLVSDSDVVFVDIRESDELQKTGTLKGALHVPRG CCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHCCCCCEEECCCC FLEFQADPTSPTHKPELGGGKKLVLYCGSGSRSALGANTLMEMGIINIAHVAGGFPALQQ EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH AGAPCEEAKQ CCCCHHHCCC >Mature Secondary Structure ATKRAKDLVAEANRNVETLSGAEAEKLVSDSDVVFVDIRESDELQKTGTLKGALHVPRG CCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHCCCCCEEECCCC FLEFQADPTSPTHKPELGGGKKLVLYCGSGSRSALGANTLMEMGIINIAHVAGGFPALQQ EEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH AGAPCEEAKQ CCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA