Definition | Nitrobacter hamburgensis X14 plasmid 3, complete sequence. |
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Accession | NC_007961 |
Length | 121,408 |
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The map label for this gene is blh [H]
Identifier: 92109728
GI number: 92109728
Start: 75255
End: 76163
Strand: Reverse
Name: blh [H]
Synonym: Nham_4621
Alternate gene names: 92109728
Gene position: 76163-75255 (Counterclockwise)
Preceding gene: 92109729
Following gene: 92109727
Centisome position: 62.73
GC content: 56.22
Gene sequence:
>909_bases ATGTCAAACATACATGTCAGCAAAGGCACCCCCATCGTCGCCGGGTTCTTCGAAAAACGCACATCAAGCGTTCAATACGT AGTGGCCGACCCCGAAACCAAGAAGTGCGCGATTATCGACCCCGTGCTCGATTTCGATCCGAACTCAGGTGCCACCGCGA CCCATGCCGCGGACGAATTGCTGCATTTCATCAAACATGAAAATTACACACTGCAGTGGGTTCTCGACACGCATCCCCAT GCGGACCATCTTTCGGCAGCGGGCTATCTGAAAGACAAGACCGGTGTGCCCACAGCGATTGGCGAGAAAGTCGTTGAGGT CCAAAAGCTATGGAAGGAAATCTACAATTACTCAGACGCGTTCCCCACCGACGGGTCGCAATGGGACAGGCTTTTCCGAG ATGGCGAGCGATTCAAGATCGGCGATATGGATGTCGAAGTCCTACTAACCCCGGGACATACGCTTGCTTCGATCGCGTAT CTGGTGGGCGATGCTGCTTTCATTCACGACACCATCTTCATGCCCGATGGGGGTACAGCCAGGGCGGATTTTCCGGGCGG CAGCGCCCGCGAGCTGTGGAACAGCATCCAGCGCGTCGTGGAGTTGCCGGATAAGACCCGTTTGTTCACGGGGCACGATT ATTGTCCCGCCGGACGCAAAAAGCCGCTCTGGGAAAGTACGGTCGCTCAGCAACGCGCCGAGAACATCCACCTGACCAAG GCGCGAACGGAGCAAGAGTTCGTGGCTCTTCGCGAGAAACGCGATCGCGAACTGCCGATGCCGAAACTCATTTTGCATTC TCTGCAGGTGAATATTCGCGGAGGCCGGCTCCCGGAAACGGAAAAGGACGGCAAGCGCTATCTAAAACTTCCGCTCAATG CACTCGGAGACGCGCCTTGGAATGCGTGA
Upstream 100 bases:
>100_bases CACCCTCAATATCGTTTTTGCAAGTCTCGTCATTGCTGTCGGGGTTTACGTGACTGTTCGCGGGCTTACCTCCCTCGTGG CAACTTAGAGAGCAGTGCAG
Downstream 100 bases:
>100_bases AAGACGGGATCATGCCAGCTCTCACGATTCGGGCATACTCACCGGCTGCAGCCCGAACCCGCTTGATGCTCGAGACCCAG TATCGCCCAATCAAACCGAA
Product: beta-lactamase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSNIHVSKGTPIVAGFFEKRTSSVQYVVADPETKKCAIIDPVLDFDPNSGATATHAADELLHFIKHENYTLQWVLDTHPH ADHLSAAGYLKDKTGVPTAIGEKVVEVQKLWKEIYNYSDAFPTDGSQWDRLFRDGERFKIGDMDVEVLLTPGHTLASIAY LVGDAAFIHDTIFMPDGGTARADFPGGSARELWNSIQRVVELPDKTRLFTGHDYCPAGRKKPLWESTVAQQRAENIHLTK ARTEQEFVALREKRDRELPMPKLILHSLQVNIRGGRLPETEKDGKRYLKLPLNALGDAPWNA
Sequences:
>Translated_302_residues MSNIHVSKGTPIVAGFFEKRTSSVQYVVADPETKKCAIIDPVLDFDPNSGATATHAADELLHFIKHENYTLQWVLDTHPH ADHLSAAGYLKDKTGVPTAIGEKVVEVQKLWKEIYNYSDAFPTDGSQWDRLFRDGERFKIGDMDVEVLLTPGHTLASIAY LVGDAAFIHDTIFMPDGGTARADFPGGSARELWNSIQRVVELPDKTRLFTGHDYCPAGRKKPLWESTVAQQRAENIHLTK ARTEQEFVALREKRDRELPMPKLILHSLQVNIRGGRLPETEKDGKRYLKLPLNALGDAPWNA >Mature_301_residues SNIHVSKGTPIVAGFFEKRTSSVQYVVADPETKKCAIIDPVLDFDPNSGATATHAADELLHFIKHENYTLQWVLDTHPHA DHLSAAGYLKDKTGVPTAIGEKVVEVQKLWKEIYNYSDAFPTDGSQWDRLFRDGERFKIGDMDVEVLLTPGHTLASIAYL VGDAAFIHDTIFMPDGGTARADFPGGSARELWNSIQRVVELPDKTRLFTGHDYCPAGRKKPLWESTVAQQRAENIHLTKA RTEQEFVALREKRDRELPMPKLILHSLQVNIRGGRLPETEKDGKRYLKLPLNALGDAPWNA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=273, Percent_Identity=26.3736263736264, Blast_Score=92, Evalue=4e-19, Organism=Escherichia coli, GI1787158, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17538952, Length=269, Percent_Identity=28.6245353159851, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI221330176, Length=263, Percent_Identity=28.8973384030418, Blast_Score=107, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33852; Mature: 33720
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIHVSKGTPIVAGFFEKRTSSVQYVVADPETKKCAIIDPVLDFDPNSGATATHAADEL CCCEECCCCCCEEEHHHHHCCCCEEEEEECCCCCCEEEECCHHCCCCCCCCCHHHHHHHH LHFIKHENYTLQWVLDTHPHADHLSAAGYLKDKTGVPTAIGEKVVEVQKLWKEIYNYSDA HHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC FPTDGSQWDRLFRDGERFKIGDMDVEVLLTPGHTLASIAYLVGDAAFIHDTIFMPDGGTA CCCCCHHHHHHHHCCCEEEECCCCEEEEEECCHHHHHHHHHHHCHHHHEEEEECCCCCCE RADFPGGSARELWNSIQRVVELPDKTRLFTGHDYCPAGRKKPLWESTVAQQRAENIHLTK ECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEH ARTEQEFVALREKRDRELPMPKLILHSLQVNIRGGRLPETEKDGKRYLKLPLNALGDAPW HHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCHHHCCCCCC NA CC >Mature Secondary Structure SNIHVSKGTPIVAGFFEKRTSSVQYVVADPETKKCAIIDPVLDFDPNSGATATHAADEL CCEECCCCCCEEEHHHHHCCCCEEEEEECCCCCCEEEECCHHCCCCCCCCCHHHHHHHH LHFIKHENYTLQWVLDTHPHADHLSAAGYLKDKTGVPTAIGEKVVEVQKLWKEIYNYSDA HHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC FPTDGSQWDRLFRDGERFKIGDMDVEVLLTPGHTLASIAYLVGDAAFIHDTIFMPDGGTA CCCCCHHHHHHHHCCCEEEECCCCEEEEEECCHHHHHHHHHHHCHHHHEEEEECCCCCCE RADFPGGSARELWNSIQRVVELPDKTRLFTGHDYCPAGRKKPLWESTVAQQRAENIHLTK ECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCEEEEH ARTEQEFVALREKRDRELPMPKLILHSLQVNIRGGRLPETEKDGKRYLKLPLNALGDAPW HHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCHHHCCCCCC NA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]