| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is lptB [H]
Identifier: 91790318
GI number: 91790318
Start: 4741011
End: 4741817
Strand: Reverse
Name: lptB [H]
Synonym: Bpro_4486
Alternate gene names: 91790318
Gene position: 4741817-4741011 (Counterclockwise)
Preceding gene: 91790319
Following gene: 91790317
Centisome position: 91.18
GC content: 64.68
Gene sequence:
>807_bases ATGGACAGAATGGACAATCCAACCGCGAATGTGGTGACTGACGCGCCGGCAACCCACACCCAGCCGCCCAGCCGTCTGGT GGCCCAGGGGCTGCAGAAATCCTATGGCAGCCGCAAGGTGGTCCAGGACGTCTCGCTGTCCGTGCAAAAAGGCGAGGTGG TGGGCCTGCTGGGCCCCAACGGCGCGGGCAAAACCACGTCGTTCTACATGATCGTGGGCCTGGTGCGTGCCGATGCGGGC GAAATCTCCATCGACGGCCAGTCGGTGGAGCACATGCCGATCCACCTGCGCGCCCGCCTCGGCCTGAGCTACCTGCCGCA GGAAGCATCGATTTTCCGCAAGCTCACCGTGGAAGAAAATGTGCGCGCCGTGCTGGAACTGCAGCGGGACGCCACCGGCA AGCCGCTGCGCCGCGCAGACCTTGAAGCGCGTCTCGATGCGCTGCTGCAGGACCTGCGGGTCGATCATTTGCGCGACTCG CCGGCGCCGGCGCTGTCAGGGGGCGAGCGCCGCCGCGTCGAGATCGCGCGAGCCCTGGCGACCCAGCCGCGCTTCATCCT GCTCGACGAGCCCTTTGCCGGCATCGACCCGATCGCCGTGATCGAAATCCAGCGCATCATCGGTTTCCTGAAGTCGCGCG GCATTGGCGTGCTGATCACCGACCACAATGTGCGCGAAACGCTGGGCATTTGCGACCATGCCTACATCATCAGTGACGGC CATGTGCTGGCTGCCGGCGCCCCCTCCGAGATTGTGAACAACGCCGATGTGCGCCGCGTTTATCTCGGTGAACATTTCAG GATGTAA
Upstream 100 bases:
>100_bases CCGCGCGGTGCCGCCTCGGCACCGCAGCCGGCCGCCGCGCCCGCGCCCGCGCCCAGTCTGCGTCCCAGCACCACGCTGGG GCAATGACGAAACTCCCAAC
Downstream 100 bases:
>100_bases TGGCTCCCCCCCGTTGTTTGCTCACTTCGTGTAGCACCCTCCCCCCTCAAGGGGGCTGCGCCTGCGGCCCGGCAGAGCCG GTTCCGCGGCCCATGCTTGA
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDRMDNPTANVVTDAPATHTQPPSRLVAQGLQKSYGSRKVVQDVSLSVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAG EISIDGQSVEHMPIHLRARLGLSYLPQEASIFRKLTVEENVRAVLELQRDATGKPLRRADLEARLDALLQDLRVDHLRDS PAPALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVIEIQRIIGFLKSRGIGVLITDHNVRETLGICDHAYIISDG HVLAAGAPSEIVNNADVRRVYLGEHFRM
Sequences:
>Translated_268_residues MDRMDNPTANVVTDAPATHTQPPSRLVAQGLQKSYGSRKVVQDVSLSVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAG EISIDGQSVEHMPIHLRARLGLSYLPQEASIFRKLTVEENVRAVLELQRDATGKPLRRADLEARLDALLQDLRVDHLRDS PAPALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVIEIQRIIGFLKSRGIGVLITDHNVRETLGICDHAYIISDG HVLAAGAPSEIVNNADVRRVYLGEHFRM >Mature_268_residues MDRMDNPTANVVTDAPATHTQPPSRLVAQGLQKSYGSRKVVQDVSLSVQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAG EISIDGQSVEHMPIHLRARLGLSYLPQEASIFRKLTVEENVRAVLELQRDATGKPLRRADLEARLDALLQDLRVDHLRDS PAPALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVIEIQRIIGFLKSRGIGVLITDHNVRETLGICDHAYIISDG HVLAAGAPSEIVNNADVRRVYLGEHFRM
Specific function: Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system [H]
COG id: COG1137
COG function: function code R; ABC-type (unclassified) transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=257, Percent_Identity=32.295719844358, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI47078218, Length=231, Percent_Identity=34.1991341991342, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI45446740, Length=231, Percent_Identity=34.1991341991342, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI27436953, Length=241, Percent_Identity=31.9502074688797, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI27477115, Length=259, Percent_Identity=30.1158301158301, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI150417984, Length=228, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI6005701, Length=252, Percent_Identity=31.3492063492063, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI31657092, Length=220, Percent_Identity=30.9090909090909, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI105990541, Length=217, Percent_Identity=30.4147465437788, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI116734710, Length=242, Percent_Identity=30.9917355371901, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI27262624, Length=222, Percent_Identity=28.8288288288288, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27262626, Length=222, Percent_Identity=28.8288288288288, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27881501, Length=220, Percent_Identity=29.5454545454545, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI30795238, Length=220, Percent_Identity=29.5454545454545, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI11967969, Length=228, Percent_Identity=30.2631578947368, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI21536376, Length=254, Percent_Identity=28.3464566929134, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI9961250, Length=231, Percent_Identity=30.7359307359307, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4505771, Length=231, Percent_Identity=30.7359307359307, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI9961252, Length=231, Percent_Identity=30.7359307359307, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI171184400, Length=232, Percent_Identity=26.7241379310345, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI42741659, Length=169, Percent_Identity=33.1360946745562, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI46592964, Length=222, Percent_Identity=28.3783783783784, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI46592978, Length=222, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI46592956, Length=222, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI46592915, Length=222, Percent_Identity=28.3783783783784, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI46592898, Length=222, Percent_Identity=28.3783783783784, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI46592971, Length=222, Percent_Identity=28.3783783783784, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI190343023, Length=247, Percent_Identity=28.7449392712551, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI255708477, Length=219, Percent_Identity=26.4840182648402, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI215820660, Length=220, Percent_Identity=25.9090909090909, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI20143975, Length=220, Percent_Identity=25.9090909090909, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI9955963, Length=175, Percent_Identity=30.8571428571429, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI156105685, Length=235, Percent_Identity=27.2340425531915, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI21536378, Length=179, Percent_Identity=31.8435754189944, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI148612844, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI11967971, Length=222, Percent_Identity=24.7747747747748, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI66529005, Length=225, Percent_Identity=28, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI90421313, Length=228, Percent_Identity=24.1228070175439, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI89111135, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI9665248, Length=173, Percent_Identity=26.0115606936416, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI21729873, Length=212, Percent_Identity=29.7169811320755, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI15149474, Length=212, Percent_Identity=29.7169811320755, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9955970, Length=158, Percent_Identity=32.2784810126582, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789593, Length=243, Percent_Identity=59.2592592592593, Blast_Score=289, Evalue=1e-79, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=36, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI87082268, Length=230, Percent_Identity=31.304347826087, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1788761, Length=246, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=33.8842975206612, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI87081791, Length=231, Percent_Identity=30.7359307359307, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=30.9322033898305, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=30.9090909090909, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787370, Length=223, Percent_Identity=30.4932735426009, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI48994943, Length=228, Percent_Identity=32.0175438596491, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI87081782, Length=227, Percent_Identity=30.8370044052863, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1786319, Length=220, Percent_Identity=34.5454545454545, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789586, Length=230, Percent_Identity=35.2173913043478, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786253, Length=220, Percent_Identity=30.4545454545455, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1790525, Length=241, Percent_Identity=29.8755186721992, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788165, Length=221, Percent_Identity=33.4841628959276, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1790467, Length=224, Percent_Identity=29.4642857142857, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1787792, Length=230, Percent_Identity=30.8695652173913, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786803, Length=244, Percent_Identity=29.5081967213115, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789032, Length=245, Percent_Identity=30.6122448979592, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI48995001, Length=211, Percent_Identity=31.2796208530806, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787712, Length=218, Percent_Identity=28.4403669724771, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1790190, Length=218, Percent_Identity=28.4403669724771, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=30.6306306306306, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787089, Length=231, Percent_Identity=29.8701298701299, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=30.8035714285714, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789672, Length=242, Percent_Identity=28.5123966942149, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=31.25, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=27.0833333333333, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1790162, Length=236, Percent_Identity=29.6610169491525, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788897, Length=233, Percent_Identity=32.618025751073, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=29.3838862559242, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1786345, Length=225, Percent_Identity=29.7777777777778, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788472, Length=232, Percent_Identity=26.2931034482759, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87081834, Length=190, Percent_Identity=31.0526315789474, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788210, Length=220, Percent_Identity=28.1818181818182, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=30.4721030042918, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1786872, Length=221, Percent_Identity=32.1266968325792, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788644, Length=241, Percent_Identity=29.8755186721992, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788053, Length=167, Percent_Identity=33.5329341317365, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=31.1926605504587, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788506, Length=213, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1789891, Length=238, Percent_Identity=26.890756302521, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787759, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788002, Length=237, Percent_Identity=27.4261603375527, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787105, Length=188, Percent_Identity=30.8510638297872, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI48994883, Length=220, Percent_Identity=25.4545454545455, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786703, Length=220, Percent_Identity=29.0909090909091, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI2367384, Length=173, Percent_Identity=34.6820809248555, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787500, Length=254, Percent_Identity=26.7716535433071, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787164, Length=219, Percent_Identity=26.9406392694064, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789890, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994997, Length=237, Percent_Identity=25.3164556962025, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787758, Length=242, Percent_Identity=25.2066115702479, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI145693107, Length=221, Percent_Identity=28.5067873303167, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786698, Length=192, Percent_Identity=25.5208333333333, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787112, Length=242, Percent_Identity=28.099173553719, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786975, Length=234, Percent_Identity=27.3504273504274, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082064, Length=196, Percent_Identity=33.1632653061224, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787182, Length=161, Percent_Identity=31.6770186335404, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787547, Length=217, Percent_Identity=23.0414746543779, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17510237, Length=219, Percent_Identity=34.2465753424658, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71983523, Length=236, Percent_Identity=31.3559322033898, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71983516, Length=236, Percent_Identity=31.3559322033898, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=31.3559322033898, Blast_Score=114, Evalue=5e-26, Organism=Caenorhabditis elegans, GI115533608, Length=228, Percent_Identity=30.2631578947368, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17565586, Length=226, Percent_Identity=29.2035398230088, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI212646699, Length=213, Percent_Identity=30.5164319248826, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71984940, Length=217, Percent_Identity=30.4147465437788, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17565938, Length=236, Percent_Identity=26.6949152542373, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17558664, Length=249, Percent_Identity=28.1124497991968, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71988343, Length=222, Percent_Identity=27.027027027027, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=26.7543859649123, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17569145, Length=174, Percent_Identity=30.4597701149425, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17569143, Length=176, Percent_Identity=33.5227272727273, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71992290, Length=230, Percent_Identity=27.3913043478261, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17567265, Length=186, Percent_Identity=30.1075268817204, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI115533592, Length=225, Percent_Identity=27.5555555555556, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193211017, Length=221, Percent_Identity=28.0542986425339, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193211015, Length=221, Percent_Identity=28.0542986425339, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25146777, Length=216, Percent_Identity=25, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71992285, Length=212, Percent_Identity=27.8301886792453, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71996809, Length=181, Percent_Identity=29.2817679558011, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202349, Length=226, Percent_Identity=26.9911504424779, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17511077, Length=212, Percent_Identity=27.8301886792453, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17569081, Length=230, Percent_Identity=25.2173913043478, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI115535101, Length=256, Percent_Identity=26.953125, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17543740, Length=234, Percent_Identity=27.3504273504274, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25146765, Length=218, Percent_Identity=26.1467889908257, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567269, Length=160, Percent_Identity=30.625, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI86563255, Length=228, Percent_Identity=26.7543859649123, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17541710, Length=235, Percent_Identity=23.4042553191489, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115532730, Length=181, Percent_Identity=27.0718232044199, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71992080, Length=218, Percent_Identity=26.1467889908257, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI86564969, Length=218, Percent_Identity=26.1467889908257, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17551700, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71992070, Length=218, Percent_Identity=26.1467889908257, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17551702, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992066, Length=218, Percent_Identity=26.1467889908257, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534520, Length=220, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17539902, Length=242, Percent_Identity=25.6198347107438, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17533971, Length=222, Percent_Identity=24.7747747747748, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17567243, Length=242, Percent_Identity=24.7933884297521, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193209740, Length=222, Percent_Identity=27.4774774774775, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320339, Length=257, Percent_Identity=24.5136186770428, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324498, Length=234, Percent_Identity=25.6410256410256, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324904, Length=195, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323959, Length=220, Percent_Identity=26.3636363636364, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24666092, Length=229, Percent_Identity=34.9344978165939, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI24643674, Length=233, Percent_Identity=31.7596566523605, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI221512771, Length=228, Percent_Identity=28.5087719298246, Blast_Score=103, Evalue=8e-23, Organism=Drosophila melanogaster, GI28574150, Length=241, Percent_Identity=29.045643153527, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI116007328, Length=241, Percent_Identity=29.045643153527, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI28573573, Length=226, Percent_Identity=29.2035398230088, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI28573571, Length=226, Percent_Identity=29.2035398230088, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24648314, Length=218, Percent_Identity=27.5229357798165, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI85725262, Length=226, Percent_Identity=32.3008849557522, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI116007184, Length=211, Percent_Identity=30.3317535545024, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI221500365, Length=211, Percent_Identity=30.3317535545024, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24650853, Length=235, Percent_Identity=30.6382978723404, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24650855, Length=235, Percent_Identity=30.6382978723404, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI281362751, Length=235, Percent_Identity=30.6382978723404, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI28571209, Length=236, Percent_Identity=28.8135593220339, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24662800, Length=222, Percent_Identity=27.027027027027, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24581191, Length=219, Percent_Identity=25.5707762557078, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581189, Length=219, Percent_Identity=25.5707762557078, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581193, Length=219, Percent_Identity=25.5707762557078, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581195, Length=219, Percent_Identity=25.5707762557078, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24659289, Length=175, Percent_Identity=33.1428571428571, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI19920532, Length=223, Percent_Identity=26.0089686098655, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24580930, Length=223, Percent_Identity=26.0089686098655, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI28574533, Length=219, Percent_Identity=25.5707762557078, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI85816269, Length=220, Percent_Identity=25.4545454545455, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24580553, Length=220, Percent_Identity=25.4545454545455, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI85724864, Length=220, Percent_Identity=25.4545454545455, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24580555, Length=220, Percent_Identity=25.4545454545455, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24582014, Length=237, Percent_Identity=29.1139240506329, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24582012, Length=237, Percent_Identity=29.1139240506329, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI45552361, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552335, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552341, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583969, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552337, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552345, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552339, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552355, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552359, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552351, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552343, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550972, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552363, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552357, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552347, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552353, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI45552349, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI85724858, Length=229, Percent_Identity=26.2008733624454, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85724856, Length=229, Percent_Identity=26.2008733624454, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580547, Length=229, Percent_Identity=26.2008733624454, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580551, Length=229, Percent_Identity=26.2008733624454, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580549, Length=229, Percent_Identity=26.2008733624454, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580545, Length=229, Percent_Identity=26.2008733624454, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574744, Length=219, Percent_Identity=24.2009132420091, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI17136592, Length=230, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363262, Length=230, Percent_Identity=26.5217391304348, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24653245, Length=230, Percent_Identity=26.5217391304348, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI45552199, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24581407, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24641565, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI45552805, Length=178, Percent_Identity=28.0898876404494, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI17647219, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076682, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076684, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581617, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581615, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357907, Length=193, Percent_Identity=30.5699481865285, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574259, Length=241, Percent_Identity=26.1410788381743, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581387, Length=219, Percent_Identity=24.6575342465753, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581383, Length=219, Percent_Identity=24.6575342465753, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581385, Length=219, Percent_Identity=24.6575342465753, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI62484234, Length=207, Percent_Identity=28.0193236714976, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24650986, Length=213, Percent_Identity=26.7605633802817, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358185, Length=213, Percent_Identity=26.7605633802817, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI17136662, Length=234, Percent_Identity=26.0683760683761, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550390, Length=205, Percent_Identity=25.8536585365854, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585091, Length=160, Percent_Identity=30, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI23397593, Length=216, Percent_Identity=26.8518518518519, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29284; Mature: 29284
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRMDNPTANVVTDAPATHTQPPSRLVAQGLQKSYGSRKVVQDVSLSVQKGEVVGLLGPN CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCEEECCCEEEEECCC GAGKTTSFYMIVGLVRADAGEISIDGQSVEHMPIHLRARLGLSYLPQEASIFRKLTVEEN CCCCCEEHEEEEEEHHCCCCEEEECCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHHHHH VRAVLELQRDATGKPLRRADLEARLDALLQDLRVDHLRDSPAPALSGGERRRVEIARALA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH TQPRFILLDEPFAGIDPIAVIEIQRIIGFLKSRGIGVLITDHNVRETLGICDHAYIISDG CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCEEEEECC HVLAAGAPSEIVNNADVRRVYLGEHFRM EEEECCCHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MDRMDNPTANVVTDAPATHTQPPSRLVAQGLQKSYGSRKVVQDVSLSVQKGEVVGLLGPN CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCEEECCCEEEEECCC GAGKTTSFYMIVGLVRADAGEISIDGQSVEHMPIHLRARLGLSYLPQEASIFRKLTVEEN CCCCCEEHEEEEEEHHCCCCEEEECCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHHHHH VRAVLELQRDATGKPLRRADLEARLDALLQDLRVDHLRDSPAPALSGGERRRVEIARALA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH TQPRFILLDEPFAGIDPIAVIEIQRIIGFLKSRGIGVLITDHNVRETLGICDHAYIISDG CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCEEEEECC HVLAAGAPSEIVNNADVRRVYLGEHFRM EEEECCCHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]