Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhbN [C]

Identifier: 91790319

GI number: 91790319

Start: 4741831

End: 4742448

Strand: Reverse

Name: yhbN [C]

Synonym: Bpro_4487

Alternate gene names: 91790319

Gene position: 4742448-4741831 (Counterclockwise)

Preceding gene: 91790320

Following gene: 91790318

Centisome position: 91.2

GC content: 65.86

Gene sequence:

>618_bases
ATGAAACACCCCTTTTTTTCCTTGATCGTGCTGGCCGCACTGGCGGTCGGGGCCGTGTTTCCCGTCGCTGCCGAGCGGGC
TGACCGCGACAAGCCGATGAACGCGGAGGCCGATGCCCTGCGTTATGACGACCTGAAACAGACCAGCGTGTTCACCGGCA
ATGTGGTGATCACCAAGGGCACCACCATTGTCCGGGGCGAGCGGGTGGATGTCAGCCAGGATCCCCAGGGCTACCAGCAG
GCCCTGGCCGTGGCGGCACCGGGCAAGCTGGCCTTTTACCGGAAAAAGCGCGACGGGGTGGACGAGTACATCGAAGGCGA
GGGCGAGCGGATCGAATACGACAGCCGTGCCGATACCGTCAAATTCATCAAGCAGGCCGTGGTGCGCCGCTACAACGGCG
CGACCCTGGTCGACGAAACGACCGGCTCCCTGATTGTTTACGACAACAACACCGATGTGTTCACGGTCGACGGAGGCGCA
CAAAACCGCACCGCCGTCAACCCCACCGGGCGGATTCGCGCCATGCTGTCGCCGCGCGGTGCCGCCTCGGCACCGCAGCC
GGCCGCCGCGCCCGCGCCCGCGCCCAGTCTGCGTCCCAGCACCACGCTGGGGCAATGA

Upstream 100 bases:

>100_bases
GTGGCGGGTTTTTTTATGGGCCCATTTGCCGGCGCCGGCAATCCCGGGGCTGGCATGGCTACAATCACTCCAAACCCTTA
GCAGCAAGATTCGTGCCTTT

Downstream 100 bases:

>100_bases
CGAAACTCCCAACATGGACAGAATGGACAATCCAACCGCGAATGTGGTGACTGACGCGCCGGCAACCCACACCCAGCCGC
CCAGCCGTCTGGTGGCCCAG

Product: OstA-like protein

Products: NA

Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Lipopolysaccharide Transport Periplasmic Protein Lpta; Protein YhbN; Exported Protein

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKHPFFSLIVLAALAVGAVFPVAAERADRDKPMNAEADALRYDDLKQTSVFTGNVVITKGTTIVRGERVDVSQDPQGYQQ
ALAVAAPGKLAFYRKKRDGVDEYIEGEGERIEYDSRADTVKFIKQAVVRRYNGATLVDETTGSLIVYDNNTDVFTVDGGA
QNRTAVNPTGRIRAMLSPRGAASAPQPAAAPAPAPSLRPSTTLGQ

Sequences:

>Translated_205_residues
MKHPFFSLIVLAALAVGAVFPVAAERADRDKPMNAEADALRYDDLKQTSVFTGNVVITKGTTIVRGERVDVSQDPQGYQQ
ALAVAAPGKLAFYRKKRDGVDEYIEGEGERIEYDSRADTVKFIKQAVVRRYNGATLVDETTGSLIVYDNNTDVFTVDGGA
QNRTAVNPTGRIRAMLSPRGAASAPQPAAAPAPAPSLRPSTTLGQ
>Mature_205_residues
MKHPFFSLIVLAALAVGAVFPVAAERADRDKPMNAEADALRYDDLKQTSVFTGNVVITKGTTIVRGERVDVSQDPQGYQQ
ALAVAAPGKLAFYRKKRDGVDEYIEGEGERIEYDSRADTVKFIKQAVVRRYNGATLVDETTGSLIVYDNNTDVFTVDGGA
QNRTAVNPTGRIRAMLSPRGAASAPQPAAAPAPAPSLRPSTTLGQ

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21997; Mature: 21997

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPFFSLIVLAALAVGAVFPVAAERADRDKPMNAEADALRYDDLKQTSVFTGNVVITKG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEECCEEEECC
TTIVRGERVDVSQDPQGYQQALAVAAPGKLAFYRKKRDGVDEYIEGEGERIEYDSRADTV
CEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCEEEECCCHHHH
KFIKQAVVRRYNGATLVDETTGSLIVYDNNTDVFTVDGGAQNRTAVNPTGRIRAMLSPRG
HHHHHHHHHHCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCEEECCCCEEEEEECCCC
AASAPQPAAAPAPAPSLRPSTTLGQ
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKHPFFSLIVLAALAVGAVFPVAAERADRDKPMNAEADALRYDDLKQTSVFTGNVVITKG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEECCEEEECC
TTIVRGERVDVSQDPQGYQQALAVAAPGKLAFYRKKRDGVDEYIEGEGERIEYDSRADTV
CEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCEEEECCCHHHH
KFIKQAVVRRYNGATLVDETTGSLIVYDNNTDVFTVDGGAQNRTAVNPTGRIRAMLSPRG
HHHHHHHHHHCCCCEEEECCCCCEEEEECCCCEEEECCCCCCCEEECCCCEEEEEECCCC
AASAPQPAAAPAPAPSLRPSTTLGQ
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA