Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789227
Identifier: 91789227
GI number: 91789227
Start: 3564726
End: 3565751
Strand: Direct
Name: 91789227
Synonym: Bpro_3371
Alternate gene names: NA
Gene position: 3564726-3565751 (Clockwise)
Preceding gene: 91789226
Following gene: 91789228
Centisome position: 68.55
GC content: 70.27
Gene sequence:
>1026_bases ATGAACACTCGTCACCCAACAACCCTCGCAGCCGGGGGCTGCCTCTCGCGCCGTGGCCTGCTCGTGCAGGCGGCAGCTGC CGCGCTGGCGGCGCCCTGGGTGGCCAACAGCCATGCGGCGGCCAATGTGGCGGGCGGCCGGCCCATCACGCTGGTGGTCT CGTACCCCGCAGGCGGCGGCGCAGACCTGATTGCGCGCATCATCGCGCCGCGCATGGCCGATGCGCTGGGCCAGAGCGTG GTCGTGGACAACAAACCCGGCGCGAGCGGGCAGCTGGCGGCATCACAGGTAGCGCGCGCCACGGCGGACGGCACCACGCT GCTGCTGGATGCATCGTCCTTCGCGGTGAACCCGTCGCTGTTTCCCAAGCTGCCGTACGACAGCGCCAAGGCCTTCACGC CGCTGGCGGTGCTGGCCACCTTTCCGAACGTGCTGGTGTGCACGCCCGGCTTTTCTGCCAGGTCGGTCAAGGACGTGATC CAGCTGGCCAGGGCCCGGCCGGGCGAGGTGACATATGCCTCGTCGGGAAACGGCTCGGCGCAACACCTGGCGGGCGCCAT GTTCGAAGGCCGCGCAGGCGTGCAGCTGCTGCACATTCCCTACCGTGGCGGCGGCCCGGCCCTCAATGACGTGATGGGCG GACAGGTGCCGCTGTTCTTCGCCAACGTGGCGTCGTCGCTGGGGCATATCCAGGCGGGCAAGCTGCGGCCGCTGGCGGTG ACCAGCGCGGTGCGAGCCCGCTCGCTGCCCGATGTGCCCACCATGGCGGAGGCCGGATTGGCCGGCTTCGAGGTGCTGGA GTGGAACCCGCTGCTGGCCCCTGCAGGCCTGCCGGCGGACGCAAAGGCCACGCTGGTGGCCGCCATTCGCAAGGCACTGG CCGACCCCGAGGTGCTGGGCCGCGTGCGCCAATTGGGCGGTGACGTGTTTGCCGATACCTCGCAGCAAAGCGCCGGCAAG TTCATCGCGGCCCAGCAGGAACAATGGGCGCGTGTGGTGCGCGAGCGCAAGATCTCGGTGGGCTGA
Upstream 100 bases:
>100_bases TGAACAAGCCACCCAAACAAATCGCTTCAGCAAATCGCTTCAACAAACCGCTTCGACAAATCATTTGCGCAAGACCGCAA AACACAGGAGAACACAGGCC
Downstream 100 bases:
>100_bases TGACTGAAAGGAAACACCCCCTGAGTCGCTTCGCGCCTTCCCCCTCGAGGGGGACGACGCCAATGGCCGGGCGAAGCCCG TTCCATGGCGTCCGCTGGGC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MNTRHPTTLAAGGCLSRRGLLVQAAAAALAAPWVANSHAAANVAGGRPITLVVSYPAGGGADLIARIIAPRMADALGQSV VVDNKPGASGQLAASQVARATADGTTLLLDASSFAVNPSLFPKLPYDSAKAFTPLAVLATFPNVLVCTPGFSARSVKDVI QLARARPGEVTYASSGNGSAQHLAGAMFEGRAGVQLLHIPYRGGGPALNDVMGGQVPLFFANVASSLGHIQAGKLRPLAV TSAVRARSLPDVPTMAEAGLAGFEVLEWNPLLAPAGLPADAKATLVAAIRKALADPEVLGRVRQLGGDVFADTSQQSAGK FIAAQQEQWARVVRERKISVG
Sequences:
>Translated_341_residues MNTRHPTTLAAGGCLSRRGLLVQAAAAALAAPWVANSHAAANVAGGRPITLVVSYPAGGGADLIARIIAPRMADALGQSV VVDNKPGASGQLAASQVARATADGTTLLLDASSFAVNPSLFPKLPYDSAKAFTPLAVLATFPNVLVCTPGFSARSVKDVI QLARARPGEVTYASSGNGSAQHLAGAMFEGRAGVQLLHIPYRGGGPALNDVMGGQVPLFFANVASSLGHIQAGKLRPLAV TSAVRARSLPDVPTMAEAGLAGFEVLEWNPLLAPAGLPADAKATLVAAIRKALADPEVLGRVRQLGGDVFADTSQQSAGK FIAAQQEQWARVVRERKISVG >Mature_341_residues MNTRHPTTLAAGGCLSRRGLLVQAAAAALAAPWVANSHAAANVAGGRPITLVVSYPAGGGADLIARIIAPRMADALGQSV VVDNKPGASGQLAASQVARATADGTTLLLDASSFAVNPSLFPKLPYDSAKAFTPLAVLATFPNVLVCTPGFSARSVKDVI QLARARPGEVTYASSGNGSAQHLAGAMFEGRAGVQLLHIPYRGGGPALNDVMGGQVPLFFANVASSLGHIQAGKLRPLAV TSAVRARSLPDVPTMAEAGLAGFEVLEWNPLLAPAGLPADAKATLVAAIRKALADPEVLGRVRQLGGDVFADTSQQSAGK FIAAQQEQWARVVRERKISVG
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34855; Mature: 34855
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRHPTTLAAGGCLSRRGLLVQAAAAALAAPWVANSHAAANVAGGRPITLVVSYPAGGG CCCCCCCCEECCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCC ADLIARIIAPRMADALGQSVVVDNKPGASGQLAASQVARATADGTTLLLDASSFAVNPSL HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEECCCC FPKLPYDSAKAFTPLAVLATFPNVLVCTPGFSARSVKDVIQLARARPGEVTYASSGNGSA CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCH QHLAGAMFEGRAGVQLLHIPYRGGGPALNDVMGGQVPLFFANVASSLGHIQAGKLRPLAV HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHH TSAVRARSLPDVPTMAEAGLAGFEVLEWNPLLAPAGLPADAKATLVAAIRKALADPEVLG HHHHHHCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH RVRQLGGDVFADTSQQSAGKFIAAQQEQWARVVRERKISVG HHHHHCCCCCCCCCHHHCCCEEHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTRHPTTLAAGGCLSRRGLLVQAAAAALAAPWVANSHAAANVAGGRPITLVVSYPAGGG CCCCCCCCEECCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCC ADLIARIIAPRMADALGQSVVVDNKPGASGQLAASQVARATADGTTLLLDASSFAVNPSL HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCEECCCC FPKLPYDSAKAFTPLAVLATFPNVLVCTPGFSARSVKDVIQLARARPGEVTYASSGNGSA CCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCH QHLAGAMFEGRAGVQLLHIPYRGGGPALNDVMGGQVPLFFANVASSLGHIQAGKLRPLAV HHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHH TSAVRARSLPDVPTMAEAGLAGFEVLEWNPLLAPAGLPADAKATLVAAIRKALADPEVLG HHHHHHCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHH RVRQLGGDVFADTSQQSAGKFIAAQQEQWARVVRERKISVG HHHHHCCCCCCCCCHHHCCCEEHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]