Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789228
Identifier: 91789228
GI number: 91789228
Start: 3565908
End: 3566723
Strand: Direct
Name: 91789228
Synonym: Bpro_3372
Alternate gene names: NA
Gene position: 3565908-3566723 (Clockwise)
Preceding gene: 91789227
Following gene: 91789230
Centisome position: 68.57
GC content: 72.3
Gene sequence:
>816_bases ATGGCTTTGACCCCCGCCCCCTTCGGCTCCGCCCTGCCATCAGGGTGGGACGCGCATGTGCACGTGTTCGACAGTGCCGC GCCCGCTCGGGCCGGCCACTACCAGCCGGTGCACCGGCCACTGGCTGACATCGAGGCGCTGGCGGCTGCGCACGGCGTGG GCCACCTGGTGCTGGTGCAACCCAGCGTGTACGGCACCGACAACCGCGTGCTGCTCGATGCCCTGGCCCAGACGCCCGGC CGCCACCGTGGCGTGGTGGTGCTGGACGTGGGCGTGCCCGATGCCGAGCTGGACCGCATGCACGCGCTGGGCGTGCGCGG GGTGCGCTTCAACCTGGTGTCCCCGGTGGGCAACGGGCCAGAGGCCATGAAAGCGCTGGCACCGCGCCTGGCAGAGCGCG GCTGGCATGTGCAGTGGTACGCCAACCCGGGCGACCTGGCCACCATTGCCCAGCTGCATCAGGGCAGCGCCGTGGCCTGC GTGCTGGACCACCTGGCCGGGCTGCATACCCTGCTGCCTGGGCAGGACCTGGCCTGGCAGGGGCTGACCCGGCTGGCCGG GCAAGGCGCGTGGGTCAAGCTGTCGGGCTGGTACCGGCTGCTGGCCAGCGCTCCGTATGGCCTGCTGCACCCGGCCATCA CCCGCGTGGCAGCGCAGATGGGCGAGCGCCTGGTGTGGGGGTCTGACTGGCCGCACACGTTCTTTGCGTCCGGCGCGCTG CCCAGCTATGCCAGCGTGTGGGAGCCGGTGGTGAACGCACTGGGCCACGGCGCGGCACTGCGCATTCGGGATGCGGGAGC CCGGCTCTACGCCTGA
Upstream 100 bases:
>100_bases ACGCCAATGGCCGGGCGAAGCCCGTTCCATGGCGTCCGCTGGGCTGAGTCGCGCCAGTTTCGTGGGCTACGGGTGGCGCG CAGCGCGGTGGACAACTGAG
Downstream 100 bases:
>100_bases GAGAAGGCCTGTTCAGCATCGCCCGAAAGGCGGGCGGACAAGCGGGCGGGCGGGCGGGCGAGCGGTGTTGCCGCACTGGC TGCTCAACAGCCATGGGGCA
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; PDC Hydrolase-Like Protein; Exported Protein
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MALTPAPFGSALPSGWDAHVHVFDSAAPARAGHYQPVHRPLADIEALAAAHGVGHLVLVQPSVYGTDNRVLLDALAQTPG RHRGVVVLDVGVPDAELDRMHALGVRGVRFNLVSPVGNGPEAMKALAPRLAERGWHVQWYANPGDLATIAQLHQGSAVAC VLDHLAGLHTLLPGQDLAWQGLTRLAGQGAWVKLSGWYRLLASAPYGLLHPAITRVAAQMGERLVWGSDWPHTFFASGAL PSYASVWEPVVNALGHGAALRIRDAGARLYA
Sequences:
>Translated_271_residues MALTPAPFGSALPSGWDAHVHVFDSAAPARAGHYQPVHRPLADIEALAAAHGVGHLVLVQPSVYGTDNRVLLDALAQTPG RHRGVVVLDVGVPDAELDRMHALGVRGVRFNLVSPVGNGPEAMKALAPRLAERGWHVQWYANPGDLATIAQLHQGSAVAC VLDHLAGLHTLLPGQDLAWQGLTRLAGQGAWVKLSGWYRLLASAPYGLLHPAITRVAAQMGERLVWGSDWPHTFFASGAL PSYASVWEPVVNALGHGAALRIRDAGARLYA >Mature_270_residues ALTPAPFGSALPSGWDAHVHVFDSAAPARAGHYQPVHRPLADIEALAAAHGVGHLVLVQPSVYGTDNRVLLDALAQTPGR HRGVVVLDVGVPDAELDRMHALGVRGVRFNLVSPVGNGPEAMKALAPRLAERGWHVQWYANPGDLATIAQLHQGSAVACV LDHLAGLHTLLPGQDLAWQGLTRLAGQGAWVKLSGWYRLLASAPYGLLHPAITRVAAQMGERLVWGSDWPHTFFASGALP SYASVWEPVVNALGHGAALRIRDAGARLYA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28763; Mature: 28632
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTPAPFGSALPSGWDAHVHVFDSAAPARAGHYQPVHRPLADIEALAAAHGVGHLVLVQ CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC PSVYGTDNRVLLDALAQTPGRHRGVVVLDVGVPDAELDRMHALGVRGVRFNLVSPVGNGP CCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCH EAMKALAPRLAERGWHVQWYANPGDLATIAQLHQGSAVACVLDHLAGLHTLLPGQDLAWQ HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH GLTRLAGQGAWVKLSGWYRLLASAPYGLLHPAITRVAAQMGERLVWGSDWPHTFFASGAL HHHHHCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCHHHEECCCC PSYASVWEPVVNALGHGAALRIRDAGARLYA CCHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure ALTPAPFGSALPSGWDAHVHVFDSAAPARAGHYQPVHRPLADIEALAAAHGVGHLVLVQ CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC PSVYGTDNRVLLDALAQTPGRHRGVVVLDVGVPDAELDRMHALGVRGVRFNLVSPVGNGP CCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCH EAMKALAPRLAERGWHVQWYANPGDLATIAQLHQGSAVACVLDHLAGLHTLLPGQDLAWQ HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH GLTRLAGQGAWVKLSGWYRLLASAPYGLLHPAITRVAAQMGERLVWGSDWPHTFFASGAL HHHHHCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCHHHEECCCC PSYASVWEPVVNALGHGAALRIRDAGARLYA CCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA