Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is trxC [C]
Identifier: 91789225
GI number: 91789225
Start: 3563070
End: 3563507
Strand: Direct
Name: trxC [C]
Synonym: Bpro_3369
Alternate gene names: 91789225
Gene position: 3563070-3563507 (Clockwise)
Preceding gene: 91789220
Following gene: 91789226
Centisome position: 68.52
GC content: 66.89
Gene sequence:
>438_bases ATGACTGAATCACTCCACATTGTTTGCCCGCACTGCCACACCACCAACCGCGTCCGGGCAGACCAGCTTGGCAGTGCGCC CGACTGCGGCAGCTGCAAGAAGGCGCTGTTCACCGCCCATTCCACCGCGCTGGACGAAGCCGCCTTTGACAAACACATCG GCCGCAACCACATTCCGGTGCTGGTGGACTTCTGGGCGCCGTGGTGCGGGCCCTGCCGCCAGATGGCGCCGGCCTACGAA CAGGTGGCCGCGCAGCTGGAGCCCCGGGTGCGCGTGGCCAAGGTAGACACCGAAGCCGTGCCCAACCTGGGGGCACGTTT CAACATTCGCAGCATTCCCACGCTGGCGCTGTTTCAGAACGGTCGCGAGGTGGCGCGCCAGGCCGGCGCCATGGGCGCGG CAGACATCGTGCGCTGGGTGCAGTCCAAGCTGCGCTGA
Upstream 100 bases:
>100_bases TGCAAATCGCGGGCGGTGGCCGGCAGGACGGGTGCCGGCGCCAGCCGAATCAACGGGAAAATGCTTGAAATGCCCCGCCA CGGCCCCAAGGTGCACCCTT
Downstream 100 bases:
>100_bases TGGGGGTCTGCCCAGAAATGCTATTTTTTCAATAGCACTTCACCCTTTGCTTGATTGGACTGCCGGCACTTTTTATTCAT AAAACTGCCAACCCAGCTCA
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTESLHIVCPHCHTTNRVRADQLGSAPDCGSCKKALFTAHSTALDEAAFDKHIGRNHIPVLVDFWAPWCGPCRQMAPAYE QVAAQLEPRVRVAKVDTEAVPNLGARFNIRSIPTLALFQNGREVARQAGAMGAADIVRWVQSKLR
Sequences:
>Translated_145_residues MTESLHIVCPHCHTTNRVRADQLGSAPDCGSCKKALFTAHSTALDEAAFDKHIGRNHIPVLVDFWAPWCGPCRQMAPAYE QVAAQLEPRVRVAKVDTEAVPNLGARFNIRSIPTLALFQNGREVARQAGAMGAADIVRWVQSKLR >Mature_144_residues TESLHIVCPHCHTTNRVRADQLGSAPDCGSCKKALFTAHSTALDEAAFDKHIGRNHIPVLVDFWAPWCGPCRQMAPAYEQ VAAQLEPRVRVAKVDTEAVPNLGARFNIRSIPTLALFQNGREVARQAGAMGAADIVRWVQSKLR
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4758304, Length=101, Percent_Identity=36.6336633663366, Blast_Score=73, Evalue=7e-14, Organism=Homo sapiens, GI20070125, Length=92, Percent_Identity=35.8695652173913, Blast_Score=73, Evalue=8e-14, Organism=Homo sapiens, GI224493972, Length=106, Percent_Identity=33.0188679245283, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI42794771, Length=106, Percent_Identity=33.0188679245283, Blast_Score=71, Evalue=3e-13, Organism=Homo sapiens, GI21361657, Length=78, Percent_Identity=41.025641025641, Blast_Score=70, Evalue=9e-13, Organism=Homo sapiens, GI5031973, Length=98, Percent_Identity=33.6734693877551, Blast_Score=66, Evalue=8e-12, Organism=Homo sapiens, GI94966757, Length=95, Percent_Identity=36.8421052631579, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1788936, Length=140, Percent_Identity=41.4285714285714, Blast_Score=124, Evalue=3e-30, Organism=Escherichia coli, GI87082331, Length=101, Percent_Identity=34.6534653465347, Blast_Score=87, Evalue=5e-19, Organism=Caenorhabditis elegans, GI25144092, Length=101, Percent_Identity=37.6237623762376, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554386, Length=103, Percent_Identity=35.9223300970874, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17556044, Length=104, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=8e-14, Organism=Caenorhabditis elegans, GI193209454, Length=103, Percent_Identity=33.9805825242718, Blast_Score=72, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17569137, Length=103, Percent_Identity=33.9805825242718, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32566189, Length=103, Percent_Identity=33.9805825242718, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17507915, Length=101, Percent_Identity=34.6534653465347, Blast_Score=69, Evalue=9e-13, Organism=Caenorhabditis elegans, GI115532378, Length=89, Percent_Identity=35.9550561797753, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115532380, Length=89, Percent_Identity=35.9550561797753, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544108, Length=89, Percent_Identity=34.8314606741573, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=86, Percent_Identity=39.5348837209302, Blast_Score=75, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6321648, Length=86, Percent_Identity=36.046511627907, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI17647799, Length=98, Percent_Identity=40.8163265306122, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573567, Length=93, Percent_Identity=35.4838709677419, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI19921434, Length=104, Percent_Identity=35.5769230769231, Blast_Score=73, Evalue=7e-14, Organism=Drosophila melanogaster, GI21358065, Length=135, Percent_Identity=28.8888888888889, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI17648013, Length=71, Percent_Identity=38.0281690140845, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24583090, Length=71, Percent_Identity=38.0281690140845, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859803, Length=127, Percent_Identity=30.7086614173228, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 15927; Mature: 15796
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESLHIVCPHCHTTNRVRADQLGSAPDCGSCKKALFTAHSTALDEAAFDKHIGRNHIPV CCCCCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE LVDFWAPWCGPCRQMAPAYEQVAAQLEPRVRVAKVDTEAVPNLGARFNIRSIPTLALFQN EEECCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHC GREVARQAGAMGAADIVRWVQSKLR CHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure TESLHIVCPHCHTTNRVRADQLGSAPDCGSCKKALFTAHSTALDEAAFDKHIGRNHIPV CCCCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE LVDFWAPWCGPCRQMAPAYEQVAAQLEPRVRVAKVDTEAVPNLGARFNIRSIPTLALFQN EEECCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHC GREVARQAGAMGAADIVRWVQSKLR CHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8652661 [H]