Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789220
Identifier: 91789220
GI number: 91789220
Start: 3559665
End: 3560270
Strand: Direct
Name: 91789220
Synonym: Bpro_3364
Alternate gene names: NA
Gene position: 3559665-3560270 (Clockwise)
Preceding gene: 91789218
Following gene: 91789225
Centisome position: 68.45
GC content: 65.84
Gene sequence:
>606_bases ATGCCCCAACCCGAATTCAGCCCCGCTGCCGACCGCAACAAGCAGCCCATCTTCAATATGCTGCGCGAAGTGCTGCCGGA GCGCGGCCATGCGCTGGAGATTGCCTCGGGCACTGGCCAGCACGTGGCCTGGTTTGCCGCTGGCCTGCCGCACTGGACAT GGCAGCCCACCGACGCACGGCCCGGCGCGCTGGACTCCATTGCAGCTTATGTGGAGCAGCAGGGCCTGACGCAGGTACGC CCGCCCTTGCTGCTGGATGTGATGGCGCCGCACTGGTTGCCAGACGACGCGAAGTTCGACCTGATTTACTGCGCCAACAT GCTGCACATCGCCCCCTGGGCCACCTGCTCCGCATTGATGCAGGGAAGTGCGCGGCACCTGGCACCGGGCGGTGTGTTGA TTACCTACGGGCCCTATCTGGAAGATGACGTGCAGACCTCGGAGGGCAACCTGGCGTTTGACCAAAGCCTGCGCGCGCAG GATCCCGCCTGGGGCATCCGCCGGCGTGAAGACGTGGAGCAGGAGGCTGCGCGCGCCGGGCTGAAGTTATCGTCGCGGCA CGCCATGCCCGCGAATAATCTGTTGCTGGTGTGGGCCAGGGCCTGA
Upstream 100 bases:
>100_bases CGTAACGCGTCCGCTGCCCGGTTTTCTCCACGGCGGCGGCGCAAGGGCTACCATTCACCATCGCTCCTGTCACGCATTCG TCCTGCCGCAACGCCCGCCC
Downstream 100 bases:
>100_bases AACCGGGGGGCGGATGCTGCGCCCATAACAAACCCCGCCGCAAACCAGGCCGCTCAGCTACCCGTCAAAGCCGCATAGGC CGCCCGCGTATCGGGCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPQPEFSPAADRNKQPIFNMLREVLPERGHALEIASGTGQHVAWFAAGLPHWTWQPTDARPGALDSIAAYVEQQGLTQVR PPLLLDVMAPHWLPDDAKFDLIYCANMLHIAPWATCSALMQGSARHLAPGGVLITYGPYLEDDVQTSEGNLAFDQSLRAQ DPAWGIRRREDVEQEAARAGLKLSSRHAMPANNLLLVWARA
Sequences:
>Translated_201_residues MPQPEFSPAADRNKQPIFNMLREVLPERGHALEIASGTGQHVAWFAAGLPHWTWQPTDARPGALDSIAAYVEQQGLTQVR PPLLLDVMAPHWLPDDAKFDLIYCANMLHIAPWATCSALMQGSARHLAPGGVLITYGPYLEDDVQTSEGNLAFDQSLRAQ DPAWGIRRREDVEQEAARAGLKLSSRHAMPANNLLLVWARA >Mature_200_residues PQPEFSPAADRNKQPIFNMLREVLPERGHALEIASGTGQHVAWFAAGLPHWTWQPTDARPGALDSIAAYVEQQGLTQVRP PLLLDVMAPHWLPDDAKFDLIYCANMLHIAPWATCSALMQGSARHLAPGGVLITYGPYLEDDVQTSEGNLAFDQSLRAQD PAWGIRRREDVEQEAARAGLKLSSRHAMPANNLLLVWARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=200, Percent_Identity=42, Blast_Score=141, Evalue=4e-34, Organism=Homo sapiens, GI93102391, Length=137, Percent_Identity=45.985401459854, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI93102401, Length=131, Percent_Identity=45.8015267175573, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71998087, Length=201, Percent_Identity=37.3134328358209, Blast_Score=135, Evalue=1e-32, Organism=Drosophila melanogaster, GI28574095, Length=213, Percent_Identity=38.4976525821596, Blast_Score=144, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22205; Mature: 22074
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPEFSPAADRNKQPIFNMLREVLPERGHALEIASGTGQHVAWFAAGLPHWTWQPTDAR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC PGALDSIAAYVEQQGLTQVRPPLLLDVMAPHWLPDDAKFDLIYCANMLHIAPWATCSALM CCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHHHHCHHHHHHHHH QGSARHLAPGGVLITYGPYLEDDVQTSEGNLAFDQSLRAQDPAWGIRRREDVEQEAARAG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCC LKLSSRHAMPANNLLLVWARA CEECCCCCCCCCCEEEEEECC >Mature Secondary Structure PQPEFSPAADRNKQPIFNMLREVLPERGHALEIASGTGQHVAWFAAGLPHWTWQPTDAR CCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC PGALDSIAAYVEQQGLTQVRPPLLLDVMAPHWLPDDAKFDLIYCANMLHIAPWATCSALM CCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCEEHHHHHHHHHHCHHHHHHHHH QGSARHLAPGGVLITYGPYLEDDVQTSEGNLAFDQSLRAQDPAWGIRRREDVEQEAARAG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCC LKLSSRHAMPANNLLLVWARA CEECCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA