Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is piv [H]
Identifier: 91789196
GI number: 91789196
Start: 3536711
End: 3537697
Strand: Direct
Name: piv [H]
Synonym: Bpro_3340
Alternate gene names: 91789196
Gene position: 3536711-3537697 (Clockwise)
Preceding gene: 91789195
Following gene: 91789201
Centisome position: 68.01
GC content: 57.55
Gene sequence:
>987_bases ATGAGTGCTACTTCAGAACAAATATTCATTGGTATCGATGTCTCCAAAGCAACGCTTGATCTGGCCGTTCGCGGTCAAGC CAAAGCACAGCAGTTTGTCAATACTGATGCAGGCGTTGGCGCCTTGATAGACAGCCTGGCAACGCGTAAGGATAGTGTGG CGGTAGTCTTGATGGAGGCCACGGGAGGCCTGGAGCGGCTGGCGGCAACGGCGCTGTGCCTGGCCGGTTATGCCGTCATG GTGGTCAACCCCAGGCAGGCCCATGACTTTGCCAAGGCGCTTGGATTTTTGAGCAAGACCGACAAGAGCGATGCCCAGGC GCTGGCCCAGTTCGCCCACACCCTTTACAGCAGTGACAAGCGGGACAAGTTGCTGCTCAAGTTGCCAACAGTGCAGCAGG ACATGCTCGCGGCAATGGTCACCCGGCGCTCCCAGCTCGTGGTGATGCGCGTGGCGGAGGGTAACCGGCTGGCAAGCAGC CATCCGACGCAGAAAAAAAGCATTCAGGCTGTACTCAAGGTCATTGACCGTCAGGTCAAGGAGCTTGATGCAGACATTGC AGGCAGTCTGGGCAAGCATTTCAAGGAAAAGCTCGATTTGCTCAAAGGTATGAAAGGTGTGGGGATCTCGACCCAGGCTG CCTTGATGGCATCGTTGCCAGAGTTGGGCAGTTTGAGTGCGCGCGAGATTGGCAAGCTGGTAGGGGTGGCACCGCTTAAC TGCGATAGTGGCACGATGAAGGGCAAAAGAGTCACTTGGGGTGGGCGTGCTGACATGCGCTCGGCCCTGTACATGGCCAG CCTGAGTGCGGTGCGTCATGACCCGTTGATCAAGGCTTTTTATCAGCGCTTGCGTGCGGCAGGCAAGCCTGCGAAGGTGG CGTTGGTGGCCTGCATGCACAAGCTGTTGACGATCATGAATGCCATCATCAAGTCGGGCAAGCCCTGGCAGGCGGGCTAT GGTTGTCCACAGGCTGGAGACGCTTGA
Upstream 100 bases:
>100_bases AAGCTTTTGGCGTGGATCACTTGCCGCTCGTTGTAAGCCCGAACAGTTGCTAGTTGGCCATATTGATTTTTTGGACCCCG TATTTGCAAGGATGGGATTT
Downstream 100 bases:
>100_bases AATTTCATTCAAAATCGTTTGACTTTGAACACAGTTGCTTCTGTCTGCGCCGAGGAGCGCAGGGCCAGGCGAATCAGGGA TCGCGATTGTCTGAGCCGCA
Product: transposase IS116/IS110/IS902
Products: NA
Alternate protein names: PIVML [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSATSEQIFIGIDVSKATLDLAVRGQAKAQQFVNTDAGVGALIDSLATRKDSVAVVLMEATGGLERLAATALCLAGYAVM VVNPRQAHDFAKALGFLSKTDKSDAQALAQFAHTLYSSDKRDKLLLKLPTVQQDMLAAMVTRRSQLVVMRVAEGNRLASS HPTQKKSIQAVLKVIDRQVKELDADIAGSLGKHFKEKLDLLKGMKGVGISTQAALMASLPELGSLSAREIGKLVGVAPLN CDSGTMKGKRVTWGGRADMRSALYMASLSAVRHDPLIKAFYQRLRAAGKPAKVALVACMHKLLTIMNAIIKSGKPWQAGY GCPQAGDA
Sequences:
>Translated_328_residues MSATSEQIFIGIDVSKATLDLAVRGQAKAQQFVNTDAGVGALIDSLATRKDSVAVVLMEATGGLERLAATALCLAGYAVM VVNPRQAHDFAKALGFLSKTDKSDAQALAQFAHTLYSSDKRDKLLLKLPTVQQDMLAAMVTRRSQLVVMRVAEGNRLASS HPTQKKSIQAVLKVIDRQVKELDADIAGSLGKHFKEKLDLLKGMKGVGISTQAALMASLPELGSLSAREIGKLVGVAPLN CDSGTMKGKRVTWGGRADMRSALYMASLSAVRHDPLIKAFYQRLRAAGKPAKVALVACMHKLLTIMNAIIKSGKPWQAGY GCPQAGDA >Mature_327_residues SATSEQIFIGIDVSKATLDLAVRGQAKAQQFVNTDAGVGALIDSLATRKDSVAVVLMEATGGLERLAATALCLAGYAVMV VNPRQAHDFAKALGFLSKTDKSDAQALAQFAHTLYSSDKRDKLLLKLPTVQQDMLAAMVTRRSQLVVMRVAEGNRLASSH PTQKKSIQAVLKVIDRQVKELDADIAGSLGKHFKEKLDLLKGMKGVGISTQAALMASLPELGSLSAREIGKLVGVAPLNC DSGTMKGKRVTWGGRADMRSALYMASLSAVRHDPLIKAFYQRLRAAGKPAKVALVACMHKLLTIMNAIIKSGKPWQAGYG CPQAGDA
Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 34913; Mature: 34782
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATSEQIFIGIDVSKATLDLAVRGQAKAQQFVNTDAGVGALIDSLATRKDSVAVVLMEA CCCCCCEEEEEEECCHHHHHHEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEC TGGLERLAATALCLAGYAVMVVNPRQAHDFAKALGFLSKTDKSDAQALAQFAHTLYSSDK CCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC RDKLLLKLPTVQQDMLAAMVTRRSQLVVMRVAEGNRLASSHPTQKKSIQAVLKVIDRQVK CCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELDADIAGSLGKHFKEKLDLLKGMKGVGISTQAALMASLPELGSLSAREIGKLVGVAPLN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC CDSGTMKGKRVTWGGRADMRSALYMASLSAVRHDPLIKAFYQRLRAAGKPAKVALVACMH CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH KLLTIMNAIIKSGKPWQAGYGCPQAGDA HHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SATSEQIFIGIDVSKATLDLAVRGQAKAQQFVNTDAGVGALIDSLATRKDSVAVVLMEA CCCCCEEEEEEECCHHHHHHEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEC TGGLERLAATALCLAGYAVMVVNPRQAHDFAKALGFLSKTDKSDAQALAQFAHTLYSSDK CCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC RDKLLLKLPTVQQDMLAAMVTRRSQLVVMRVAEGNRLASSHPTQKKSIQAVLKVIDRQVK CCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELDADIAGSLGKHFKEKLDLLKGMKGVGISTQAALMASLPELGSLSAREIGKLVGVAPLN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC CDSGTMKGKRVTWGGRADMRSALYMASLSAVRHDPLIKAFYQRLRAAGKPAKVALVACMH CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH KLLTIMNAIIKSGKPWQAGYGCPQAGDA HHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403542 [H]