Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789201
Identifier: 91789201
GI number: 91789201
Start: 3541987
End: 3542655
Strand: Direct
Name: 91789201
Synonym: Bpro_3345
Alternate gene names: NA
Gene position: 3541987-3542655 (Clockwise)
Preceding gene: 91789196
Following gene: 91789203
Centisome position: 68.11
GC content: 65.32
Gene sequence:
>669_bases ATGCCCGAGCCCACACCCGCAACATCGCGTAACACGCCACCACAAAATGTCAGCCAGACCACGCCCGCCAGCGTGCTTGA ATTCTGGCTGGCCGACGGCCTGGAAGGCGGCACGGCAGGCGGCTGGCCCACACAGGACCTCGGCAAACGCTGGTTTGGCG GCGGCGCCGCACTGGATGAGGAAATCAGGACGCGCTTTGGCGCGCAGGTTGTGCAGGCGATAAGTGGCGGGCTGCAGGAC TGGGAGCAACAGCCCTTGCACCGGCTGGCCCTGGTGATATTGCTCGACCAGTTCACCCGCAACGTGTTTCGCGCAAGCGC CCAGGCCTTTGCGGGCGATGCACGCGCCCAGCAACTGGTGCTGGATACGCTGGCCCATCAGACCGACCAGCAACTGCCCT GGGTCGCCCGCGTGTTCACCTACATGCCGCTGATGCACGCGGAAGACCTGGCCCTGCAGGATGAATGCGTCGCCCGCTTT TCACGGCTGGTGGCAGAGGCGCCCGGCAGGCTGAAGCAGCGCCTGCAGGGCAACCTCGACTATGCCCGCCAACACCATGC CATCATTGCCCGCTTTGGCCGCTTTCCCTACCGCAACGCGGCTTTGGGGCGCGTCAACACACCCGAGGAAGAAGACTTCC TGCGCAAGGGCCCACGCTTCGGGCAATAG
Upstream 100 bases:
>100_bases GTCCACTCAGGCTCCTGAAATTTGGGCTTGATTATCGCCCGCCATCCTGAGCGAGGGCTTAAGCTTTCCTGAGGGCCATT GCGGTTAAGCTGAACACATC
Downstream 100 bases:
>100_bases CGGCTCCCGGGCTTTTTACAAGCGCCTGTTTTGTTGTGAGCGCTTGTTGTTGTTTGTTGTTATAGGCATCAAGGCATAAG CGGGCATCAGCGCCTGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPEPTPATSRNTPPQNVSQTTPASVLEFWLADGLEGGTAGGWPTQDLGKRWFGGGAALDEEIRTRFGAQVVQAISGGLQD WEQQPLHRLALVILLDQFTRNVFRASAQAFAGDARAQQLVLDTLAHQTDQQLPWVARVFTYMPLMHAEDLALQDECVARF SRLVAEAPGRLKQRLQGNLDYARQHHAIIARFGRFPYRNAALGRVNTPEEEDFLRKGPRFGQ
Sequences:
>Translated_222_residues MPEPTPATSRNTPPQNVSQTTPASVLEFWLADGLEGGTAGGWPTQDLGKRWFGGGAALDEEIRTRFGAQVVQAISGGLQD WEQQPLHRLALVILLDQFTRNVFRASAQAFAGDARAQQLVLDTLAHQTDQQLPWVARVFTYMPLMHAEDLALQDECVARF SRLVAEAPGRLKQRLQGNLDYARQHHAIIARFGRFPYRNAALGRVNTPEEEDFLRKGPRFGQ >Mature_221_residues PEPTPATSRNTPPQNVSQTTPASVLEFWLADGLEGGTAGGWPTQDLGKRWFGGGAALDEEIRTRFGAQVVQAISGGLQDW EQQPLHRLALVILLDQFTRNVFRASAQAFAGDARAQQLVLDTLAHQTDQQLPWVARVFTYMPLMHAEDLALQDECVARFS RLVAEAPGRLKQRLQGNLDYARQHHAIIARFGRFPYRNAALGRVNTPEEEDFLRKGPRFGQ
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24744; Mature: 24613
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPTPATSRNTPPQNVSQTTPASVLEFWLADGLEGGTAGGWPTQDLGKRWFGGGAALDE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHH EIRTRFGAQVVQAISGGLQDWEQQPLHRLALVILLDQFTRNVFRASAQAFAGDARAQQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDTLAHQTDQQLPWVARVFTYMPLMHAEDLALQDECVARFSRLVAEAPGRLKQRLQGNLD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHH YARQHHAIIARFGRFPYRNAALGRVNTPEEEDFLRKGPRFGQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure PEPTPATSRNTPPQNVSQTTPASVLEFWLADGLEGGTAGGWPTQDLGKRWFGGGAALDE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHH EIRTRFGAQVVQAISGGLQDWEQQPLHRLALVILLDQFTRNVFRASAQAFAGDARAQQLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDTLAHQTDQQLPWVARVFTYMPLMHAEDLALQDECVARFSRLVAEAPGRLKQRLQGNLD HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHH YARQHHAIIARFGRFPYRNAALGRVNTPEEEDFLRKGPRFGQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA