Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is fabZ [C]
Identifier: 91789156
GI number: 91789156
Start: 3494838
End: 3495167
Strand: Direct
Name: fabZ [C]
Synonym: Bpro_3298
Alternate gene names: 91789156
Gene position: 3494838-3495167 (Clockwise)
Preceding gene: 91789155
Following gene: 91789157
Centisome position: 67.21
GC content: 66.36
Gene sequence:
>330_bases ATGCAGGGTGAAACCACCTTGACCATTGCCGCCGATCATCCGGCCTTCCCGGGGCACTTTCCGGGCCGCCCGATTGTGCC GGGCGTGCTGCTGCTCGACGCTGCCCTGCATGCCGTGCAGCAGGCCTGCCAGAGCCTGGGTGAAACAACGGTGTCCGGAC CAGCCGCGCATTGCCAGATTGCCACGGCCAAATTCCTGAGTCCGGTGCAGCCCGGCGAAACCTTGACCATCTCGTACACC CGCACGGACAAGGGCCTCACCCGCTTCGAGATCGCCTGCAGCGGACGCCCGGTAGCGAGCGGCGCGTTTGCCTTCGGGAG CGCTGCATGA
Upstream 100 bases:
>100_bases GACGCCCTGCCGCGCAACAGCACCGGAAAACTCCCGCGCGAGGCACTCCAGGCACTGGCCCGGCGGCACCAGGCGCCTGC GGGCGGAGGAACCGGCCACC
Downstream 100 bases:
>100_bases GCTCCTCGCCAGGCGCCCGGGAAGACAGCCCGCTTTCGTCGACTGGCGGGGCCGTGCCACAAGCCGCCTGGCGGCAACGC CCCGAGCGCAGCAACATGCT
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQGETTLTIAADHPAFPGHFPGRPIVPGVLLLDAALHAVQQACQSLGETTVSGPAAHCQIATAKFLSPVQPGETLTISYT RTDKGLTRFEIACSGRPVASGAFAFGSAA
Sequences:
>Translated_109_residues MQGETTLTIAADHPAFPGHFPGRPIVPGVLLLDAALHAVQQACQSLGETTVSGPAAHCQIATAKFLSPVQPGETLTISYT RTDKGLTRFEIACSGRPVASGAFAFGSAA >Mature_109_residues MQGETTLTIAADHPAFPGHFPGRPIVPGVLLLDAALHAVQQACQSLGETTVSGPAAHCQIATAKFLSPVQPGETLTISYT RTDKGLTRFEIACSGRPVASGAFAFGSAA
Specific function: Involved In Saturated Fatty Acids Biosynthesis. [C]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.- [C]
Molecular weight: Translated: 11176; Mature: 11176
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGETTLTIAADHPAFPGHFPGRPIVPGVLLLDAALHAVQQACQSLGETTVSGPAAHCQI CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE ATAKFLSPVQPGETLTISYTRTDKGLTRFEIACSGRPVASGAFAFGSAA HHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQGETTLTIAADHPAFPGHFPGRPIVPGVLLLDAALHAVQQACQSLGETTVSGPAAHCQI CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE ATAKFLSPVQPGETLTISYTRTDKGLTRFEIACSGRPVASGAFAFGSAA HHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-3-hydroxy-acyl-ACP [C]
Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA