Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789157
Identifier: 91789157
GI number: 91789157
Start: 3495164
End: 3496168
Strand: Direct
Name: 91789157
Synonym: Bpro_3299
Alternate gene names: NA
Gene position: 3495164-3496168 (Clockwise)
Preceding gene: 91789156
Following gene: 91789158
Centisome position: 67.21
GC content: 65.07
Gene sequence:
>1005_bases ATGAGCTCCTCGCCAGGCGCCCGGGAAGACAGCCCGCTTTCGTCGACTGGCGGGGCCGTGCCACAAGCCGCCTGGCGGCA ACGCCCCGAGCGCAGCAACATGCTGATGCTGCGCGTGATGACCTGGATTTCGCTGCGCCTGGGCCGCAGCGCCGGCCGCT GTGTGCTCTACGGCATCGCTGCCTACTTCCTGATTGCCAACGCGGCGGCACGGCGGGCCTCGCGGGATTACCTGCGCCGG GTGCTGCAGCTGCCCGACACCGCGCGGGTCGGCTGGCGCCATGTGTTCCGGCATTTCCTGAGCTTTGCCTCGACCATTCA TGACCGGATCTACCTGATCAACGACCGCTTCAACCTGTTTGATATCCGCGTTCACCAGGAACACCTGGTGGCTGAGCTGA CCGCTGCGCACCAAGGCGTGTTTTTGATGGGCGCCCATGCCGGCAGTTTTGAAGTGCTGCGCGCTATCGGTCGCCGGCAA CCCGGCCTGCGCGTGGCCATGGTGATGTACGAGGAAAACGCGCGCAAACTCAACGCCGCCCTGAGCGCCATCAACCCTAC GGCGCAGCAGGACATCGTCCCGCTGGGCCATGCCGATTCGATGCTCCGGGTCAACGACCTGCTGTCGACCGGCAGCGTTG TCGGCATGCTCGCCGACCGCCGCCTGAACCGTGACGCGACCCGTCCCATACCGTTTCTTGGCGAGCCCGCCGAGTTTCCC GTCGGTCCGTTCCGGATGGCGGCGATTTTGCGGCGTCCGGTGTTTTTCATGGTCGGGCTGTACCGTGGCGGCAATCGCTA CGATATCCACTTTGAAACGCTGGCCGATTTTTCCAGCATTGCCGCGGGCGGACGCGAGGCCGCGGTGCAGGCCGCGATGG CACGTTACGCGCTGCTGCTGGAGCAGCATTGCCGCGCGGCACCGTACAACTGGTTCAACTTTTTTGACTTCTGGCAGGCG GACCATCCGTTGCCCGCCGCAAACCCGGTTCCGCCCCATGATTGA
Upstream 100 bases:
>100_bases CCATCTCGTACACCCGCACGGACAAGGGCCTCACCCGCTTCGAGATCGCCTGCAGCGGACGCCCGGTAGCGAGCGGCGCG TTTGCCTTCGGGAGCGCTGC
Downstream 100 bases:
>100_bases AACGCTTGAAACGCTTGAAACGCAGTCACCGATGATCAGGCCCGTGCCAGGCCTGAAGGTTTTCCTGGCCGGAGCCGGTC TGCTGCTGGGCCTGTGCTGC
Product: putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis
Products: NA
Alternate protein names: Acyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Acetyltransferase; Glycosyl Transferase Family 2 And Acyltransferase Domains; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Oligosaccharide Acyltransferase Family Protein; Bifunctional Glycosyl Transferase/Acyl Transferase; Family 2 Glycosyl Transferase; XanthomoNADin Biosynthesis Acyltransferase Protein
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSSSPGAREDSPLSSTGGAVPQAAWRQRPERSNMLMLRVMTWISLRLGRSAGRCVLYGIAAYFLIANAAARRASRDYLRR VLQLPDTARVGWRHVFRHFLSFASTIHDRIYLINDRFNLFDIRVHQEHLVAELTAAHQGVFLMGAHAGSFEVLRAIGRRQ PGLRVAMVMYEENARKLNAALSAINPTAQQDIVPLGHADSMLRVNDLLSTGSVVGMLADRRLNRDATRPIPFLGEPAEFP VGPFRMAAILRRPVFFMVGLYRGGNRYDIHFETLADFSSIAAGGREAAVQAAMARYALLLEQHCRAAPYNWFNFFDFWQA DHPLPAANPVPPHD
Sequences:
>Translated_334_residues MSSSPGAREDSPLSSTGGAVPQAAWRQRPERSNMLMLRVMTWISLRLGRSAGRCVLYGIAAYFLIANAAARRASRDYLRR VLQLPDTARVGWRHVFRHFLSFASTIHDRIYLINDRFNLFDIRVHQEHLVAELTAAHQGVFLMGAHAGSFEVLRAIGRRQ PGLRVAMVMYEENARKLNAALSAINPTAQQDIVPLGHADSMLRVNDLLSTGSVVGMLADRRLNRDATRPIPFLGEPAEFP VGPFRMAAILRRPVFFMVGLYRGGNRYDIHFETLADFSSIAAGGREAAVQAAMARYALLLEQHCRAAPYNWFNFFDFWQA DHPLPAANPVPPHD >Mature_333_residues SSSPGAREDSPLSSTGGAVPQAAWRQRPERSNMLMLRVMTWISLRLGRSAGRCVLYGIAAYFLIANAAARRASRDYLRRV LQLPDTARVGWRHVFRHFLSFASTIHDRIYLINDRFNLFDIRVHQEHLVAELTAAHQGVFLMGAHAGSFEVLRAIGRRQP GLRVAMVMYEENARKLNAALSAINPTAQQDIVPLGHADSMLRVNDLLSTGSVVGMLADRRLNRDATRPIPFLGEPAEFPV GPFRMAAILRRPVFFMVGLYRGGNRYDIHFETLADFSSIAAGGREAAVQAAMARYALLLEQHCRAAPYNWFNFFDFWQAD HPLPAANPVPPHD
Specific function: Unknown
COG id: COG4261
COG function: function code R; Predicted acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37376; Mature: 37245
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSPGAREDSPLSSTGGAVPQAAWRQRPERSNMLMLRVMTWISLRLGRSAGRCVLYGIA CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH AYFLIANAAARRASRDYLRRVLQLPDTARVGWRHVFRHFLSFASTIHDRIYLINDRFNLF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEE DIRVHQEHLVAELTAAHQGVFLMGAHAGSFEVLRAIGRRQPGLRVAMVMYEENARKLNAA EEEEHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHH LSAINPTAQQDIVPLGHADSMLRVNDLLSTGSVVGMLADRRLNRDATRPIPFLGEPAEFP HHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VGPFRMAAILRRPVFFMVGLYRGGNRYDIHFETLADFSSIAAGGREAAVQAAMARYALLL CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EQHCRAAPYNWFNFFDFWQADHPLPAANPVPPHD HHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSSPGAREDSPLSSTGGAVPQAAWRQRPERSNMLMLRVMTWISLRLGRSAGRCVLYGIA CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH AYFLIANAAARRASRDYLRRVLQLPDTARVGWRHVFRHFLSFASTIHDRIYLINDRFNLF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEE DIRVHQEHLVAELTAAHQGVFLMGAHAGSFEVLRAIGRRQPGLRVAMVMYEENARKLNAA EEEEHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHH LSAINPTAQQDIVPLGHADSMLRVNDLLSTGSVVGMLADRRLNRDATRPIPFLGEPAEFP HHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VGPFRMAAILRRPVFFMVGLYRGGNRYDIHFETLADFSSIAAGGREAAVQAAMARYALLL CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EQHCRAAPYNWFNFFDFWQADHPLPAANPVPPHD HHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA