Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yhiN [H]
Identifier: 91789143
GI number: 91789143
Start: 3479677
End: 3480927
Strand: Direct
Name: yhiN [H]
Synonym: Bpro_3283
Alternate gene names: 91789143
Gene position: 3479677-3480927 (Clockwise)
Preceding gene: 91789142
Following gene: 91789144
Centisome position: 66.91
GC content: 64.03
Gene sequence:
>1251_bases TTGACTCAGAAATTTGATGTGATGGTGATCGGCGCAGGTGCGGCCGGGCTGTTCTGCGCCGGGATCGCGGGCCAGCTGGG CCTGAAGGTGCTGCTCGTCGACCACAGCGAGAAGGTGGCGGAAAAAATCCGCATCTCGGGCGGCGGCCGCTGCAACTTCA CCAACCGCGATGCCACGCCCGCGCAGTTTCTCAGCGAGAACCCGCATTTTTGCCGCTCCGCGCTGTCGCGCTACACACCC CAGGACTTCATCGAACTGCTACAGCGCTACGGCATTGCTTTCCATGAAAAACACAAGGGACAGCTCTTTTGCGACCATTC GGCCGAAGAGGTGATCAATATGCTGCTGGCCGAGTGCGCAGCCGGTCAGGTGACGCGCTGGCAGCCCTGCAGCGTCAAAA GTATGGTGGGCCCCGAGCAGACGGGCACAGGCAGCTATCTGATGCAGAGCGACCGCGGCCCGATTGAAGCCCGGCAAGTC GTGATTTCCACCGGCGGGCTGTCCATTCCCAAAATCGGCGCCACCGATTTCGGCTACCGCATAGCCACGCAGTTCAAGCT GCGGCTGGTGGAACCCCGGGCCGCCCTGGTGCCACTGACCTTTGATGGGGATGGCTGGGCGCCTTATGCCGGGCTGGCCG GCCTGGCGCTGCCAGTGCAAATTGACACCAACCCGCCGGAAGCCACAGCCAAACAGCGTAAAAAAGCAGTGGTCTTTTCA GAAGACCTGTTGTTCACCCACCGCGGCCTGAGCGGCCCGGCGGTGCTGCAAATTTCCAGCTTCTGGCGCGAAGGCCAGCC AGTGCGCGTCAACCTCGCGCCCGGCGTTGATTTGCCCGCGCTCTTGCTGCGCGCCAAGGCCACATCGAAAAAGCTGATCG CCAACGAACTGGCCAGCCTGGTGCCCAGCCGCCTCGCTGACGCCTGGGTCAGCCGCGACCCGGCACTGCAGCGCCCCATC AGCGAGGCCACCGACAAGGCCCTGCTGGCGCTGGCGCAACGCCTGGCCGACTGGGAACTTGTGCCCGCCGGCTCGGAAGG CTACAAAAAGGCGGAAGTCACTGTGGGCGGCGTCGACACCCGCGACCTGTCCTCGCAGACGATGGAGTCGAAGCAGCCGG GACTGTATTTCATCGGCGAAGTGGTTGACGTGACCGGCTGGCTGGGCGGCTACAACTTCCAGTGGGCCTGGGCGTCGGCT TTCGCCTGTGCACAAGCCCTGCCAGCGCGGCAAGCTACGCTGCCTGTCTGA
Upstream 100 bases:
>100_bases GACTGCAGAATTTTCCGGTGCGCAGGCCAAAACCGCCACCGCAGGATCGCTATGATTCTTATAGCTAATTTCGCTTGTAC TACTTGGGCTAGAGGCCAAT
Downstream 100 bases:
>100_bases TTTTCGCCTTGCGAAGGCGCTGGAACTGTCCTTCAGGACGAAGGGATTGGGCGGGCATCGTAGAGGAGCAGTTTTCCGCT GCGCAACACAAGAGAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTQKFDVMVIGAGAAGLFCAGIAGQLGLKVLLVDHSEKVAEKIRISGGGRCNFTNRDATPAQFLSENPHFCRSALSRYTP QDFIELLQRYGIAFHEKHKGQLFCDHSAEEVINMLLAECAAGQVTRWQPCSVKSMVGPEQTGTGSYLMQSDRGPIEARQV VISTGGLSIPKIGATDFGYRIATQFKLRLVEPRAALVPLTFDGDGWAPYAGLAGLALPVQIDTNPPEATAKQRKKAVVFS EDLLFTHRGLSGPAVLQISSFWREGQPVRVNLAPGVDLPALLLRAKATSKKLIANELASLVPSRLADAWVSRDPALQRPI SEATDKALLALAQRLADWELVPAGSEGYKKAEVTVGGVDTRDLSSQTMESKQPGLYFIGEVVDVTGWLGGYNFQWAWASA FACAQALPARQATLPV
Sequences:
>Translated_416_residues MTQKFDVMVIGAGAAGLFCAGIAGQLGLKVLLVDHSEKVAEKIRISGGGRCNFTNRDATPAQFLSENPHFCRSALSRYTP QDFIELLQRYGIAFHEKHKGQLFCDHSAEEVINMLLAECAAGQVTRWQPCSVKSMVGPEQTGTGSYLMQSDRGPIEARQV VISTGGLSIPKIGATDFGYRIATQFKLRLVEPRAALVPLTFDGDGWAPYAGLAGLALPVQIDTNPPEATAKQRKKAVVFS EDLLFTHRGLSGPAVLQISSFWREGQPVRVNLAPGVDLPALLLRAKATSKKLIANELASLVPSRLADAWVSRDPALQRPI SEATDKALLALAQRLADWELVPAGSEGYKKAEVTVGGVDTRDLSSQTMESKQPGLYFIGEVVDVTGWLGGYNFQWAWASA FACAQALPARQATLPV >Mature_415_residues TQKFDVMVIGAGAAGLFCAGIAGQLGLKVLLVDHSEKVAEKIRISGGGRCNFTNRDATPAQFLSENPHFCRSALSRYTPQ DFIELLQRYGIAFHEKHKGQLFCDHSAEEVINMLLAECAAGQVTRWQPCSVKSMVGPEQTGTGSYLMQSDRGPIEARQVV ISTGGLSIPKIGATDFGYRIATQFKLRLVEPRAALVPLTFDGDGWAPYAGLAGLALPVQIDTNPPEATAKQRKKAVVFSE DLLFTHRGLSGPAVLQISSFWREGQPVRVNLAPGVDLPALLLRAKATSKKLIANELASLVPSRLADAWVSRDPALQRPIS EATDKALLALAQRLADWELVPAGSEGYKKAEVTVGGVDTRDLSSQTMESKQPGLYFIGEVVDVTGWLGGYNFQWAWASAF ACAQALPARQATLPV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=413, Percent_Identity=48.4261501210654, Blast_Score=367, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 44877; Mature: 44746
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKFDVMVIGAGAAGLFCAGIAGQLGLKVLLVDHSEKVAEKIRISGGGRCNFTNRDATP CCCEEEEEEEECCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCEECCCCCCCCH AQFLSENPHFCRSALSRYTPQDFIELLQRYGIAFHEKHKGQLFCDHSAEEVINMLLAECA HHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHH AGQVTRWQPCSVKSMVGPEQTGTGSYLMQSDRGPIEARQVVISTGGLSIPKIGATDFGYR CCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEE IATQFKLRLVEPRAALVPLTFDGDGWAPYAGLAGLALPVQIDTNPPEATAKQRKKAVVFS EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCEEEEE EDLLFTHRGLSGPAVLQISSFWREGQPVRVNLAPGVDLPALLLRAKATSKKLIANELASL CCHHEEECCCCCCEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH VPSRLADAWVSRDPALQRPISEATDKALLALAQRLADWELVPAGSEGYKKAEVTVGGVDT HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCC RDLSSQTMESKQPGLYFIGEVVDVTGWLGGYNFQWAWASAFACAQALPARQATLPV CHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQKFDVMVIGAGAAGLFCAGIAGQLGLKVLLVDHSEKVAEKIRISGGGRCNFTNRDATP CCEEEEEEEECCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCCEECCCCCCCCH AQFLSENPHFCRSALSRYTPQDFIELLQRYGIAFHEKHKGQLFCDHSAEEVINMLLAECA HHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHH AGQVTRWQPCSVKSMVGPEQTGTGSYLMQSDRGPIEARQVVISTGGLSIPKIGATDFGYR CCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEE IATQFKLRLVEPRAALVPLTFDGDGWAPYAGLAGLALPVQIDTNPPEATAKQRKKAVVFS EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCEEEEE EDLLFTHRGLSGPAVLQISSFWREGQPVRVNLAPGVDLPALLLRAKATSKKLIANELASL CCHHEEECCCCCCEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH VPSRLADAWVSRDPALQRPISEATDKALLALAQRLADWELVPAGSEGYKKAEVTVGGVDT HHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCC RDLSSQTMESKQPGLYFIGEVVDVTGWLGGYNFQWAWASAFACAQALPARQATLPV CHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]