Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789142
Identifier: 91789142
GI number: 91789142
Start: 3478441
End: 3479487
Strand: Direct
Name: 91789142
Synonym: Bpro_3282
Alternate gene names: NA
Gene position: 3478441-3479487 (Clockwise)
Preceding gene: 91789141
Following gene: 91789143
Centisome position: 66.89
GC content: 58.36
Gene sequence:
>1047_bases ATGGGTTTGACATGCAGACCGGCTATGCTCCGCATTTTTGATCGGACGATGCCCATGTCAATCCGTCTTCTGGCCGGTGC CCTGCTGGCGCTGGGTGTGGCCTGCGCCCAGGCACAAAGCTTCTCATTCGGCCTGTGGGGCGACATGCCGTACCACAAGG CCGGAGACGACTCCAAAATTCCCGCACTGCTCAAAAGCATCAACCAGTCCGACATCGCCTTCTCGGTGTACGACGGCGAT ATCAAGGACGGCAGTTCCAGGTGTGCCGATGACATTTACACCTCGGCGCTGGCCATGTTTGACCAGATGAAACGACCCCT GGTGTATGTGCCCGGCGATAACGAATGGACCGACTGCCACCGCCTCAACAATGGCGGCTACGATGCGCTGGAGCGTCTGG CCCATCTGCGTAAAACCATGTTCCCCACGTCCCGCAGCCTGGGCAAGCGCCAGATGCCGCTGATCCACCAGGGCCAGCCC GGTGAGAAGTTTGTTGAAAACACGCGTTTCAGCCACCGCGGCATTGTATTTGCCACCCTGAATGTGCCCGGCAGCAACAA CAACAAAGTCCTGGACGAAAAAGACTGCACCAGCAAAAGCGCACGGACCACCACCCAGTGCGAAGCCAGCAATGCCGAGT ACTTGGAACGCGATACAGCCAATGTAAGCTGGTTGCAGCAGGCGTTTCAGGCCGCCAAAGAAGGCAAGGCGCGCGGCCTG GTACTGGTGATTCAGGCCGACCCCGGTTTTGACCTGCCAGAGACCGAAGACAAAGACGAGAGCGAGGCCACGCGTGTCAG CGGCTACCGCAATTTCATCAACAAGGTGGTCGCCGAAACAGAGCAGTTTGCAGGCCAGGTCTTGCTGGTGCACGGTGACA CGCATTTCTTCAAGGTGGACAGGCCGCTGTACAGCCCCGGCAAACTGCTGCCCAACCTGACCCGCCTGCAAACCTTTGGC AGCCCGCTGATTCACTGGGTGCGGGTCACGGTGGATCCGAAAAATCCAAATGTTTTCACCATCCAACCGGTGATCGTGAA GCAATAG
Upstream 100 bases:
>100_bases CACGCCTGCTACACGCCTGGAATACCGTCCCGTCCTGTCCCGAATCGCATCGCCCCAATGACCGAAAAATCGGTCTTCAG GGGCGCCCTCCCCGAATTTC
Downstream 100 bases:
>100_bases GCGAACAACCCCGCAGCACAAGCGACAAGCCGCCATCCCGGCGGGCTACACTTCCGTGTCTTGAAAAGCGCAGCTGTCGG CCACAGTCTGACTGCAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MGLTCRPAMLRIFDRTMPMSIRLLAGALLALGVACAQAQSFSFGLWGDMPYHKAGDDSKIPALLKSINQSDIAFSVYDGD IKDGSSRCADDIYTSALAMFDQMKRPLVYVPGDNEWTDCHRLNNGGYDALERLAHLRKTMFPTSRSLGKRQMPLIHQGQP GEKFVENTRFSHRGIVFATLNVPGSNNNKVLDEKDCTSKSARTTTQCEASNAEYLERDTANVSWLQQAFQAAKEGKARGL VLVIQADPGFDLPETEDKDESEATRVSGYRNFINKVVAETEQFAGQVLLVHGDTHFFKVDRPLYSPGKLLPNLTRLQTFG SPLIHWVRVTVDPKNPNVFTIQPVIVKQ
Sequences:
>Translated_348_residues MGLTCRPAMLRIFDRTMPMSIRLLAGALLALGVACAQAQSFSFGLWGDMPYHKAGDDSKIPALLKSINQSDIAFSVYDGD IKDGSSRCADDIYTSALAMFDQMKRPLVYVPGDNEWTDCHRLNNGGYDALERLAHLRKTMFPTSRSLGKRQMPLIHQGQP GEKFVENTRFSHRGIVFATLNVPGSNNNKVLDEKDCTSKSARTTTQCEASNAEYLERDTANVSWLQQAFQAAKEGKARGL VLVIQADPGFDLPETEDKDESEATRVSGYRNFINKVVAETEQFAGQVLLVHGDTHFFKVDRPLYSPGKLLPNLTRLQTFG SPLIHWVRVTVDPKNPNVFTIQPVIVKQ >Mature_347_residues GLTCRPAMLRIFDRTMPMSIRLLAGALLALGVACAQAQSFSFGLWGDMPYHKAGDDSKIPALLKSINQSDIAFSVYDGDI KDGSSRCADDIYTSALAMFDQMKRPLVYVPGDNEWTDCHRLNNGGYDALERLAHLRKTMFPTSRSLGKRQMPLIHQGQPG EKFVENTRFSHRGIVFATLNVPGSNNNKVLDEKDCTSKSARTTTQCEASNAEYLERDTANVSWLQQAFQAAKEGKARGLV LVIQADPGFDLPETEDKDESEATRVSGYRNFINKVVAETEQFAGQVLLVHGDTHFFKVDRPLYSPGKLLPNLTRLQTFGS PLIHWVRVTVDPKNPNVFTIQPVIVKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38728; Mature: 38596
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTCRPAMLRIFDRTMPMSIRLLAGALLALGVACAQAQSFSFGLWGDMPYHKAGDDSKI CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH PALLKSINQSDIAFSVYDGDIKDGSSRCADDIYTSALAMFDQMKRPLVYVPGDNEWTDCH HHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHH RLNNGGYDALERLAHLRKTMFPTSRSLGKRQMPLIHQGQPGEKFVENTRFSHRGIVFATL HCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEECCCCHHHHHHHCCCCCCCEEEEEE NVPGSNNNKVLDEKDCTSKSARTTTQCEASNAEYLERDTANVSWLQQAFQAAKEGKARGL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCE VLVIQADPGFDLPETEDKDESEATRVSGYRNFINKVVAETEQFAGQVLLVHGDTHFFKVD EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEC RPLYSPGKLLPNLTRLQTFGSPLIHWVRVTVDPKNPNVFTIQPVIVKQ CCCCCCHHHCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEECC >Mature Secondary Structure GLTCRPAMLRIFDRTMPMSIRLLAGALLALGVACAQAQSFSFGLWGDMPYHKAGDDSKI CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH PALLKSINQSDIAFSVYDGDIKDGSSRCADDIYTSALAMFDQMKRPLVYVPGDNEWTDCH HHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHH RLNNGGYDALERLAHLRKTMFPTSRSLGKRQMPLIHQGQPGEKFVENTRFSHRGIVFATL HCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEECCCCHHHHHHHCCCCCCCEEEEEE NVPGSNNNKVLDEKDCTSKSARTTTQCEASNAEYLERDTANVSWLQQAFQAAKEGKARGL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCE VLVIQADPGFDLPETEDKDESEATRVSGYRNFINKVVAETEQFAGQVLLVHGDTHFFKVD EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEC RPLYSPGKLLPNLTRLQTFGSPLIHWVRVTVDPKNPNVFTIQPVIVKQ CCCCCCHHHCCCHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA