Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is nuoH
Identifier: 91789109
GI number: 91789109
Start: 3439066
End: 3440145
Strand: Reverse
Name: nuoH
Synonym: Bpro_3249
Alternate gene names: 91789109
Gene position: 3440145-3439066 (Counterclockwise)
Preceding gene: 91789110
Following gene: 91789108
Centisome position: 66.15
GC content: 57.59
Gene sequence:
>1080_bases ATGATCGATACGGTATATGGTTTTGGCCAGGGCTTGATGGGTGGCATCTGGCCGGCGACGGTCTGGCCCGTGCTCTGGGC GCTCATCAAGATTGTCTGTGTCCTGCTGCCGCTGATGGGCTGTGTGGCCTACCTCACCTTGTGGGAGCGCAAGGCCATCG GTTTTACCCAGATTCGCTTCGGCCCCAATCGCGTCGGTCCCTTCGGCCTGCTGCAGCCGATTGCCGATGCGCTCAAGCTG CTGACCAAAGAGATCATCATGCCGACGGCGGCCAGCAAAGGCCTGTTTGTATTGGGCCCCATCATGACCATCATGCCGGC ACTGGCCGCATGGGCGGTGATTCCTTTTGGCCCCGACATTGCACTGTCCAACATCAATGCTGGCCTGCTGTTCCTGATGG CCATCACCTCGATGGAGGTGTACGGCGTGATCATTGCGGGCTGGGCCTCGAATTCCAAATACGCGTTTCTGGGCGCCATG CGCGCTTCGGCGCAAATGGTGAGCTACGAGATCGCCATGGGTTTCTGTCTGGTGGTGGTGCTGATGGTCTCAGCCAGTCT GAACATGACCGACATCGTGATGAGCCAGGCCAAAGGTATCGCTGTCGGTTATGGCCTGAATTTCCTGTCCTGGAATTGGT TGCCGCTGCTGCCGATTTTTGTCGTGTATTTCATCTCCGGGCTGGCCGAAACCAATCGTCATCCGTTTGACGTGGTTGAG GGCGAGTCGGAAATTGTGGCGGGCCATATGGTCGAGTATTCGGGCATGGCCTTTGCCATGTTCTTCCTGGCCGAGTACGC CAACATGTGGCTGGTCGCCATCCTGGCCGTCATTCTTTTCCTGGGCGGCTGGTTGTCGCCAGTGGACTGGTGGCTGTTCA ATTTGATTCCAGGCTGGATCTGGTTGGGTGCCAAAACCTTTGTCGTCGTCACCATGTTCCTCTGGGTGCGCGCTACCTTC CCACGCTTCCGTTACGACCAGATCATGCGTCTGGGCTGGAAGATCTTCATACCTGTGACCCTGGTCTGGCTGGTGGTCGT TGGGGCCTGGATGCAGACCCCCTACAACATCTGGAAATAA
Upstream 100 bases:
>100_bases ATCAGCTGGACGGACTGGTCCGGCGCGCCACGTCGTTGCAGCTGACAGCCGATGCGCGGCAGGGTGCCGGGCTGCAATCC AGGCTGGAAGGAGCAGGCGC
Downstream 100 bases:
>100_bases CATGAGCCCCCACGTTCGCTCACTTCGTGTAGCTCTCTGCCCCCCCCGGGGGGCGCTGCGCCTGCGGCCCGGCAAAGCCG GTTCCGCGGCCCCTGCTTGC
Product: respiratory-chain NADH dehydrogenase subunit 1
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H; NDH-1 subunit H
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIDTVYGFGQGLMGGIWPATVWPVLWALIKIVCVLLPLMGCVAYLTLWERKAIGFTQIRFGPNRVGPFGLLQPIADALKL LTKEIIMPTAASKGLFVLGPIMTIMPALAAWAVIPFGPDIALSNINAGLLFLMAITSMEVYGVIIAGWASNSKYAFLGAM RASAQMVSYEIAMGFCLVVVLMVSASLNMTDIVMSQAKGIAVGYGLNFLSWNWLPLLPIFVVYFISGLAETNRHPFDVVE GESEIVAGHMVEYSGMAFAMFFLAEYANMWLVAILAVILFLGGWLSPVDWWLFNLIPGWIWLGAKTFVVVTMFLWVRATF PRFRYDQIMRLGWKIFIPVTLVWLVVVGAWMQTPYNIWK
Sequences:
>Translated_359_residues MIDTVYGFGQGLMGGIWPATVWPVLWALIKIVCVLLPLMGCVAYLTLWERKAIGFTQIRFGPNRVGPFGLLQPIADALKL LTKEIIMPTAASKGLFVLGPIMTIMPALAAWAVIPFGPDIALSNINAGLLFLMAITSMEVYGVIIAGWASNSKYAFLGAM RASAQMVSYEIAMGFCLVVVLMVSASLNMTDIVMSQAKGIAVGYGLNFLSWNWLPLLPIFVVYFISGLAETNRHPFDVVE GESEIVAGHMVEYSGMAFAMFFLAEYANMWLVAILAVILFLGGWLSPVDWWLFNLIPGWIWLGAKTFVVVTMFLWVRATF PRFRYDQIMRLGWKIFIPVTLVWLVVVGAWMQTPYNIWK >Mature_359_residues MIDTVYGFGQGLMGGIWPATVWPVLWALIKIVCVLLPLMGCVAYLTLWERKAIGFTQIRFGPNRVGPFGLLQPIADALKL LTKEIIMPTAASKGLFVLGPIMTIMPALAAWAVIPFGPDIALSNINAGLLFLMAITSMEVYGVIIAGWASNSKYAFLGAM RASAQMVSYEIAMGFCLVVVLMVSASLNMTDIVMSQAKGIAVGYGLNFLSWNWLPLLPIFVVYFISGLAETNRHPFDVVE GESEIVAGHMVEYSGMAFAMFFLAEYANMWLVAILAVILFLGGWLSPVDWWLFNLIPGWIWLGAKTFVVVTMFLWVRATF PRFRYDQIMRLGWKIFIPVTLVWLVVVGAWMQTPYNIWK
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family
Homologues:
Organism=Homo sapiens, GI251831107, Length=305, Percent_Identity=41.3114754098361, Blast_Score=243, Evalue=2e-64, Organism=Escherichia coli, GI1788618, Length=326, Percent_Identity=41.4110429447853, Blast_Score=258, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOH_POLSJ (Q127X9)
Other databases:
- EMBL: CP000316 - RefSeq: YP_550061.1 - STRING: Q127X9 - GeneID: 4014095 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_3249 - NMPDR: fig|296591.1.peg.1189 - eggNOG: COG1005 - HOGENOM: HBG727670 - OMA: FMVEYGS - PhylomeDB: Q127X9 - ProtClustDB: CLSK723583 - BioCyc: PSP296591:BPRO_3249-MONOMER - HAMAP: MF_01350 - InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 - PANTHER: PTHR11432
Pfam domain/function: PF00146 NADHdh
EC number: =1.6.99.5
Molecular weight: Translated: 39950; Mature: 39950
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00667 COMPLEX1_ND1_1; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x148ab5d0)-; HASH(0xaea8714)-; HASH(0xaea9284)-; HASH(0xaea8948)-; HASH(0x15a0990c)-; HASH(0x15888d18)-; HASH(0xaea8bd0)-; HASH(0xaea875c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTVYGFGQGLMGGIWPATVWPVLWALIKIVCVLLPLMGCVAYLTLWERKAIGFTQIRF CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE GPNRVGPFGLLQPIADALKLLTKEIIMPTAASKGLFVLGPIMTIMPALAAWAVIPFGPDI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCC ALSNINAGLLFLMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEIAMGFCLVVV EECCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LMVSASLNMTDIVMSQAKGIAVGYGLNFLSWNWLPLLPIFVVYFISGLAETNRHPFDVVE HHHHCCCCHHHHHHHHCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEC GESEIVAGHMVEYSGMAFAMFFLAEYANMWLVAILAVILFLGGWLSPVDWWLFNLIPGWI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH WLGAKTFVVVTMFLWVRATFPRFRYDQIMRLGWKIFIPVTLVWLVVVGAWMQTPYNIWK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH >Mature Secondary Structure MIDTVYGFGQGLMGGIWPATVWPVLWALIKIVCVLLPLMGCVAYLTLWERKAIGFTQIRF CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE GPNRVGPFGLLQPIADALKLLTKEIIMPTAASKGLFVLGPIMTIMPALAAWAVIPFGPDI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCC ALSNINAGLLFLMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEIAMGFCLVVV EECCCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LMVSASLNMTDIVMSQAKGIAVGYGLNFLSWNWLPLLPIFVVYFISGLAETNRHPFDVVE HHHHCCCCHHHHHHHHCCCEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEC GESEIVAGHMVEYSGMAFAMFFLAEYANMWLVAILAVILFLGGWLSPVDWWLFNLIPGWI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH WLGAKTFVVVTMFLWVRATFPRFRYDQIMRLGWKIFIPVTLVWLVVVGAWMQTPYNIWK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA