Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is nuoI [H]
Identifier: 91789108
GI number: 91789108
Start: 3438425
End: 3438922
Strand: Reverse
Name: nuoI [H]
Synonym: Bpro_3248
Alternate gene names: 91789108
Gene position: 3438922-3438425 (Counterclockwise)
Preceding gene: 91789109
Following gene: 91789107
Centisome position: 66.13
GC content: 57.43
Gene sequence:
>498_bases ATGTCTACCGTAGCCTCCGTCAAGGATTTTGTTTCGAGCTTCATGCTCACCGAGCTGTTCAAGGGCATGGCCCTGACCGG CAAGTACATGTTCAGCCGCAAGATCACGGTCCAGTTTCCCGAAGAGAAAACCCCGCTGAGCCCGCGTTTTCGAGGGCTTC ACGCCTTGCGCCGCTATGACAACGGCGAAGAGCGCTGCATTGCCTGCAAGCTCTGCGAAGCCGTGTGCCCGGCGCTGGCC ATCACAATCGAGTCTGAAGTGCGTGACGACGGCAGCCGCCGCACCTCGCGTTACGACATTGACCTGACCAAATGCATTTT TTGCGGCTTCTGTGAGGAAGCCTGCCCGGTCGACGCGATTGTCGAGACCCATATTTTTGAATACCACGGTGAAAAGCGCG GTGACCTGTATTTCACCAAGGAGATGTTGCTGGCAGTGGGCGACCGCTACGAGGCCGAAATTGCCGCCAACAAGGCGGCT GACGCCAAATACCGTTGA
Upstream 100 bases:
>100_bases CCCCGGGGGGCGCTGCGCCTGCGGCCCGGCAAAGCCGGTTCCGCGGCCCCTGCTTGCATCAACGTGTCGCCAGCGAGCTC CACTCCCGCAGGAAACTGAT
Downstream 100 bases:
>100_bases ATTACCTCGCCACGCAAGTCGGCTCAAGAAAGAATCCACAATAACATGGACGCTAAAACAGGTCTCTTTTATGTTTTTGC CGCGGTGCTGCTGTTCGCGG
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSTVASVKDFVSSFMLTELFKGMALTGKYMFSRKITVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPALA ITIESEVRDDGSRRTSRYDIDLTKCIFCGFCEEACPVDAIVETHIFEYHGEKRGDLYFTKEMLLAVGDRYEAEIAANKAA DAKYR
Sequences:
>Translated_165_residues MSTVASVKDFVSSFMLTELFKGMALTGKYMFSRKITVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPALA ITIESEVRDDGSRRTSRYDIDLTKCIFCGFCEEACPVDAIVETHIFEYHGEKRGDLYFTKEMLLAVGDRYEAEIAANKAA DAKYR >Mature_164_residues STVASVKDFVSSFMLTELFKGMALTGKYMFSRKITVQFPEEKTPLSPRFRGLHALRRYDNGEERCIACKLCEAVCPALAI TIESEVRDDGSRRTSRYDIDLTKCIFCGFCEEACPVDAIVETHIFEYHGEKRGDLYFTKEMLLAVGDRYEAEIAANKAAD AKYR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=163, Percent_Identity=62.5766871165644, Blast_Score=212, Evalue=1e-55, Organism=Escherichia coli, GI1788617, Length=127, Percent_Identity=41.7322834645669, Blast_Score=106, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17555194, Length=155, Percent_Identity=60, Blast_Score=197, Evalue=1e-51, Organism=Drosophila melanogaster, GI17864306, Length=162, Percent_Identity=61.1111111111111, Blast_Score=203, Evalue=4e-53,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 18738; Mature: 18606
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVASVKDFVSSFMLTELFKGMALTGKYMFSRKITVQFPEEKTPLSPRFRGLHALRRYD CCHHHHHHHHHHHHHHHHHHHCHHHHCHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCC NGEERCIACKLCEAVCPALAITIESEVRDDGSRRTSRYDIDLTKCIFCGFCEEACPVDAI CCCHHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH VETHIFEYHGEKRGDLYFTKEMLLAVGDRYEAEIAANKAADAKYR HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure STVASVKDFVSSFMLTELFKGMALTGKYMFSRKITVQFPEEKTPLSPRFRGLHALRRYD CHHHHHHHHHHHHHHHHHHHCHHHHCHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCC NGEERCIACKLCEAVCPALAITIESEVRDDGSRRTSRYDIDLTKCIFCGFCEEACPVDAI CCCHHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH VETHIFEYHGEKRGDLYFTKEMLLAVGDRYEAEIAANKAADAKYR HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA