Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is fbpB [H]
Identifier: 91789077
GI number: 91789077
Start: 3404301
End: 3406112
Strand: Reverse
Name: fbpB [H]
Synonym: Bpro_3217
Alternate gene names: 91789077
Gene position: 3406112-3404301 (Counterclockwise)
Preceding gene: 91789078
Following gene: 91789076
Centisome position: 65.5
GC content: 65.01
Gene sequence:
>1812_bases GTGAGCGCCCGCGCAGAACCGCTTCAAGCAAGCTCGCGCCCCCCTGGGGGGCAGCCCGGCATCGCCGGGCGTGGGGGGGT CATCATCGCCCGCGCCGCTACGCTGGCCGGGCCGGCCGTTGGCGCGCGCCGCCTCGGCCTGTCGCGCGAGGACCTCATTG CGCGCGGCGTGCTGCTCACGGTGATGCTGTTCCTGATGCTGTTCCTGCTGGCGCCAATGGCATCAATCTTTGCCCGGGCG GTGCAGGACAACGATGGCAACTTCATCGGCTTTACCCATTTTGTCGAGTACCTGCAGACGCCGGCGCTGCTGGGCGCAGC CTGGAACTCGATCTGGGTGGCCGCCACCGTGGTTCTGATTTCGGTGCCCCTGGCCTTCACCTTCGCCTATGCGCTGGCCC GCAGCTGTGCGCCCTTCAAGGGCACGTTCCGGCTGATCGCGCTGATTCCGCTGCTGGCGCCTTCGCTGCTGTCGGCTATC GCCTTCATCCAGTGGTTCGGCAACCAGGGCGTGCTCAAGCCGGTGCTCGAGCTGATCGGCCTGGGCTCGATCTACGGCGC GCCCGGCATCATCCTGTCGGAGGTCTACAACACCTTTCCGCATGCGCTCATGATCCTGCTGACCGCGCTGTCGCTGGCCG ACGGACGGCTGTACGAGGCTGCCGACTCGTTCGGCACCTCGACCGTGCGCAAGTTCTTCACCATCACGCTGCCGTCCTGC AAATACGGGTTGATCAGCGCGTCCACCGTCGTCTTCACCTATGTGATTAGCGACTTCGGCGCACCCAAGGTGATAGGCGG CAACTTCAGCGTGCTGTCGCTGGACGTGTTCAAGCAGGTGGTCGGCCAGCAGAACTTCGGCCGCGGCGCGGTGGTGGGCC TGCTGTTGCTGCTGCCCTCGATCGCCTCCTTCCTGATCGACAGCCGCGTGCGGCGCAAGCTGCGGGCCCAGCTGTCGGCG CGCTCCGTGCCCTACGCGGCCAAACCGCGGCGGGGCTTCGATACCTTGATGACGGCCTACTGCGCGCTGGTGTGCGCACT GCTGTTGGCTGTGGTGGGCATGGCGATCTGGACGTCCTTCATCAAGCTCTGGCCGTATGACCTCTCCTTGAGCCTGCGCC ATTACGAGTTCGCCCTGGTCGACGGCGACCTGGCCTCGGCCTACACCAACAGCCTGAAGATGGCGGTGTGCGTGGCTTTC TTCGGCTCGCTCACGGTGTTCATCGGCGCCTACCTGACCGAGAAGACCCGCGGGCTGGAGTTGATCCGCCCGCTGATGCA CCTGCTGGCCATGCTCTCCATGGCCGTGCCGGGCCTTGTGCTGGGCCTGGGCTACATCATGTTTTTCAACCATCCCAACA ATCCGCTGGGCTTTCTGTACTCGACCATGACCCTACTTGTGCTGTCGGTCATCGTGCACTACTACACCTCCAGCCATTTG ACTGCGGTGACGGCGCTCAAGCAGATCGACAATGAATTCGAGGCCGTGTCGGCTTCGCTGAAGGTGCCGTTCTACAAGAC CTTCTTTCGCGTGACCTTGCCGGTGTGCCTGCCGGCGGTGCTGGACATAGCGCGCTACTACTTCGTGGTGTCCATGGCCA CGCTGTCGGGCGTCGTCTTCCTGTACTCGCCCGACACCATCCTCGCGGCGGTGGCCATCATGAATCTGGACGAAGCCGGC GACATCGGCCCGGCGGCGGCGCTGGCCAGCCTGACCGTGCTGACTTCTGTCGCGGTCTGCCTGGTGTATGCGGTGGCCAC CCGCGTGCTGCTGCGCAAGACCCAGGCGTGGCGAAACGTCGCCCGCCAATGA
Upstream 100 bases:
>100_bases CGCTGAACCAGCTGCACGACCTGGGTGTGCAGGCCGGTGCGCGGATTGACCTGGCGCTGCGCAGCGAACGCATCCGGGTG TTTCCGGCTGGGGTATCCCT
Downstream 100 bases:
>100_bases AGCCCGATCCCTTCCGACTTGCCACTTTTCCGTTTTTCCATTTGCCAAACATCCAAGGAGCTTTCATGACAACCGACGCC ATTCTTCTGACCCCCGGACC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MSARAEPLQASSRPPGGQPGIAGRGGVIIARAATLAGPAVGARRLGLSREDLIARGVLLTVMLFLMLFLLAPMASIFARA VQDNDGNFIGFTHFVEYLQTPALLGAAWNSIWVAATVVLISVPLAFTFAYALARSCAPFKGTFRLIALIPLLAPSLLSAI AFIQWFGNQGVLKPVLELIGLGSIYGAPGIILSEVYNTFPHALMILLTALSLADGRLYEAADSFGTSTVRKFFTITLPSC KYGLISASTVVFTYVISDFGAPKVIGGNFSVLSLDVFKQVVGQQNFGRGAVVGLLLLLPSIASFLIDSRVRRKLRAQLSA RSVPYAAKPRRGFDTLMTAYCALVCALLLAVVGMAIWTSFIKLWPYDLSLSLRHYEFALVDGDLASAYTNSLKMAVCVAF FGSLTVFIGAYLTEKTRGLELIRPLMHLLAMLSMAVPGLVLGLGYIMFFNHPNNPLGFLYSTMTLLVLSVIVHYYTSSHL TAVTALKQIDNEFEAVSASLKVPFYKTFFRVTLPVCLPAVLDIARYYFVVSMATLSGVVFLYSPDTILAAVAIMNLDEAG DIGPAAALASLTVLTSVAVCLVYAVATRVLLRKTQAWRNVARQ
Sequences:
>Translated_603_residues MSARAEPLQASSRPPGGQPGIAGRGGVIIARAATLAGPAVGARRLGLSREDLIARGVLLTVMLFLMLFLLAPMASIFARA VQDNDGNFIGFTHFVEYLQTPALLGAAWNSIWVAATVVLISVPLAFTFAYALARSCAPFKGTFRLIALIPLLAPSLLSAI AFIQWFGNQGVLKPVLELIGLGSIYGAPGIILSEVYNTFPHALMILLTALSLADGRLYEAADSFGTSTVRKFFTITLPSC KYGLISASTVVFTYVISDFGAPKVIGGNFSVLSLDVFKQVVGQQNFGRGAVVGLLLLLPSIASFLIDSRVRRKLRAQLSA RSVPYAAKPRRGFDTLMTAYCALVCALLLAVVGMAIWTSFIKLWPYDLSLSLRHYEFALVDGDLASAYTNSLKMAVCVAF FGSLTVFIGAYLTEKTRGLELIRPLMHLLAMLSMAVPGLVLGLGYIMFFNHPNNPLGFLYSTMTLLVLSVIVHYYTSSHL TAVTALKQIDNEFEAVSASLKVPFYKTFFRVTLPVCLPAVLDIARYYFVVSMATLSGVVFLYSPDTILAAVAIMNLDEAG DIGPAAALASLTVLTSVAVCLVYAVATRVLLRKTQAWRNVARQ >Mature_602_residues SARAEPLQASSRPPGGQPGIAGRGGVIIARAATLAGPAVGARRLGLSREDLIARGVLLTVMLFLMLFLLAPMASIFARAV QDNDGNFIGFTHFVEYLQTPALLGAAWNSIWVAATVVLISVPLAFTFAYALARSCAPFKGTFRLIALIPLLAPSLLSAIA FIQWFGNQGVLKPVLELIGLGSIYGAPGIILSEVYNTFPHALMILLTALSLADGRLYEAADSFGTSTVRKFFTITLPSCK YGLISASTVVFTYVISDFGAPKVIGGNFSVLSLDVFKQVVGQQNFGRGAVVGLLLLLPSIASFLIDSRVRRKLRAQLSAR SVPYAAKPRRGFDTLMTAYCALVCALLLAVVGMAIWTSFIKLWPYDLSLSLRHYEFALVDGDLASAYTNSLKMAVCVAFF GSLTVFIGAYLTEKTRGLELIRPLMHLLAMLSMAVPGLVLGLGYIMFFNHPNNPLGFLYSTMTLLVLSVIVHYYTSSHLT AVTALKQIDNEFEAVSASLKVPFYKTFFRVTLPVCLPAVLDIARYYFVVSMATLSGVVFLYSPDTILAAVAIMNLDEAGD IGPAAALASLTVLTSVAVCLVYAVATRVLLRKTQAWRNVARQ
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=283, Percent_Identity=25.0883392226148, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787080, Length=236, Percent_Identity=25, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 64937; Mature: 64805
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARAEPLQASSRPPGGQPGIAGRGGVIIARAATLAGPAVGARRLGLSREDLIARGVLLT CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCHHHHHHCCCCHHHHHHHHHHHH VMLFLMLFLLAPMASIFARAVQDNDGNFIGFTHFVEYLQTPALLGAAWNSIWVAATVVLI HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH SVPLAFTFAYALARSCAPFKGTFRLIALIPLLAPSLLSAIAFIQWFGNQGVLKPVLELIG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC LGSIYGAPGIILSEVYNTFPHALMILLTALSLADGRLYEAADSFGTSTVRKFFTITLPSC CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEEECCCC KYGLISASTVVFTYVISDFGAPKVIGGNFSVLSLDVFKQVVGQQNFGRGAVVGLLLLLPS CCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHH IASFLIDSRVRRKLRAQLSARSVPYAAKPRRGFDTLMTAYCALVCALLLAVVGMAIWTSF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKLWPYDLSLSLRHYEFALVDGDLASAYTNSLKMAVCVAFFGSLTVFIGAYLTEKTRGLE HHHCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LIRPLMHLLAMLSMAVPGLVLGLGYIMFFNHPNNPLGFLYSTMTLLVLSVIVHYYTSSHL HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TAVTALKQIDNEFEAVSASLKVPFYKTFFRVTLPVCLPAVLDIARYYFVVSMATLSGVVF HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE LYSPDTILAAVAIMNLDEAGDIGPAAALASLTVLTSVAVCLVYAVATRVLLRKTQAWRNV EECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQ HCC >Mature Secondary Structure SARAEPLQASSRPPGGQPGIAGRGGVIIARAATLAGPAVGARRLGLSREDLIARGVLLT CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCHHHHHHCCCCHHHHHHHHHHHH VMLFLMLFLLAPMASIFARAVQDNDGNFIGFTHFVEYLQTPALLGAAWNSIWVAATVVLI HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH SVPLAFTFAYALARSCAPFKGTFRLIALIPLLAPSLLSAIAFIQWFGNQGVLKPVLELIG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC LGSIYGAPGIILSEVYNTFPHALMILLTALSLADGRLYEAADSFGTSTVRKFFTITLPSC CCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHEEECCCC KYGLISASTVVFTYVISDFGAPKVIGGNFSVLSLDVFKQVVGQQNFGRGAVVGLLLLLPS CCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHH IASFLIDSRVRRKLRAQLSARSVPYAAKPRRGFDTLMTAYCALVCALLLAVVGMAIWTSF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKLWPYDLSLSLRHYEFALVDGDLASAYTNSLKMAVCVAFFGSLTVFIGAYLTEKTRGLE HHHCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LIRPLMHLLAMLSMAVPGLVLGLGYIMFFNHPNNPLGFLYSTMTLLVLSVIVHYYTSSHL HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TAVTALKQIDNEFEAVSASLKVPFYKTFFRVTLPVCLPAVLDIARYYFVVSMATLSGVVF HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE LYSPDTILAAVAIMNLDEAGDIGPAAALASLTVLTSVAVCLVYAVATRVLLRKTQAWRNV EECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQ HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]