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The map label for this gene is dedA [H]

Identifier: 91789068

GI number: 91789068

Start: 3393300

End: 3393947

Strand: Reverse

Name: dedA [H]

Synonym: Bpro_3208

Alternate gene names: 91789068

Gene position: 3393947-3393300 (Counterclockwise)

Preceding gene: 91789075

Following gene: 91789062

Centisome position: 65.26

GC content: 56.79

Gene sequence:

>648_bases
ATGGAACTGCTAACTTATCTGATGGATTTCATTCTCCACGTGGACAAACACCTGGAAACCTTTGTCACGAGCTACGGCAC
CTGGGTTTACGCGCTGCTGTTTCTCATTATTTTTGTGGAAACCGGCGTGGTCGTCATGCCATTTCTGCCCGGCGACTCGC
TGCTGTTTGTGGTCGGCGCGATGTGCGGCGTGGGCCTGATGAGCTATCCGCTGACGCTGGGGCTGCTGTTTGCGGCAGCG
GTGCTGGGCAACCAGTCCAATTACGCCATCGGCAACTACTTCGGCCCCAAGGTGTTCCAGTGGGAAGATTCAAAATTTTT
CAATAAAAAGGCGTTTAACCAGGCTCACGAGTTCTACGAGCGTTACGGCGGGATCACCATTGTGGCGGCGCGTTTCATGC
CCTTTTTACGGACTTTTGCCCCGTTTGTGGCCGGTGTGTCGCAAATGACGCGCAGCAAATTCACGCTGTACGACATCACA
GGCGGCGCGCTCTGGGTCGGCGGCATCGTCACGGCGGGCTACTTTTTCGGCAACGTCCCCTTTGTCAAGGCGAACCTGGA
CAAGATCATCTGGGCGATGATTTTGATTCCGGGCCTGTTCGTCCTGTTTGGCGCGTGGAAGGCCCGGCGCCAGGCGCGGC
AGGCCTGA

Upstream 100 bases:

>100_bases
GAAAGGGTTGACGGCAGGGCGCTCATGGTTGCAGCCATTTTAGGGGGCGGAGCCGGCGGGCTGCCAAGCCTGTCTTATTC
AGCCCCGATAATCCCGTCTC

Downstream 100 bases:

>100_bases
GGCCGCCCGGCTCGGCCCGGCTCAGCCGCCGACCTTGAGAAACAGGTCGGGATCGGGGGCAAAATTGGCGTGCAGCGGCA
ACAGGGCGCCGCCCAGCGCG

Product: DedA protein (DSG-1 protein)

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MELLTYLMDFILHVDKHLETFVTSYGTWVYALLFLIIFVETGVVVMPFLPGDSLLFVVGAMCGVGLMSYPLTLGLLFAAA
VLGNQSNYAIGNYFGPKVFQWEDSKFFNKKAFNQAHEFYERYGGITIVAARFMPFLRTFAPFVAGVSQMTRSKFTLYDIT
GGALWVGGIVTAGYFFGNVPFVKANLDKIIWAMILIPGLFVLFGAWKARRQARQA

Sequences:

>Translated_215_residues
MELLTYLMDFILHVDKHLETFVTSYGTWVYALLFLIIFVETGVVVMPFLPGDSLLFVVGAMCGVGLMSYPLTLGLLFAAA
VLGNQSNYAIGNYFGPKVFQWEDSKFFNKKAFNQAHEFYERYGGITIVAARFMPFLRTFAPFVAGVSQMTRSKFTLYDIT
GGALWVGGIVTAGYFFGNVPFVKANLDKIIWAMILIPGLFVLFGAWKARRQARQA
>Mature_215_residues
MELLTYLMDFILHVDKHLETFVTSYGTWVYALLFLIIFVETGVVVMPFLPGDSLLFVVGAMCGVGLMSYPLTLGLLFAAA
VLGNQSNYAIGNYFGPKVFQWEDSKFFNKKAFNQAHEFYERYGGITIVAARFMPFLRTFAPFVAGVSQMTRSKFTLYDIT
GGALWVGGIVTAGYFFGNVPFVKANLDKIIWAMILIPGLFVLFGAWKARRQARQA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=204, Percent_Identity=48.0392156862745, Blast_Score=200, Evalue=6e-53,
Organism=Escherichia coli, GI1789384, Length=191, Percent_Identity=31.9371727748691, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789481, Length=191, Percent_Identity=33.5078534031414, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24086; Mature: 24086

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLTYLMDFILHVDKHLETFVTSYGTWVYALLFLIIFVETGVVVMPFLPGDSLLFVVGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
MCGVGLMSYPLTLGLLFAAAVLGNQSNYAIGNYFGPKVFQWEDSKFFNKKAFNQAHEFYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHHH
RYGGITIVAARFMPFLRTFAPFVAGVSQMTRSKFTLYDITGGALWVGGIVTAGYFFGNVP
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCC
FVKANLDKIIWAMILIPGLFVLFGAWKARRQARQA
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELLTYLMDFILHVDKHLETFVTSYGTWVYALLFLIIFVETGVVVMPFLPGDSLLFVVGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
MCGVGLMSYPLTLGLLFAAAVLGNQSNYAIGNYFGPKVFQWEDSKFFNKKAFNQAHEFYE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHHH
RYGGITIVAARFMPFLRTFAPFVAGVSQMTRSKFTLYDITGGALWVGGIVTAGYFFGNVP
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCC
FVKANLDKIIWAMILIPGLFVLFGAWKARRQARQA
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]