Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788993
Identifier: 91788993
GI number: 91788993
Start: 3308824
End: 3309354
Strand: Reverse
Name: 91788993
Synonym: Bpro_3133
Alternate gene names: NA
Gene position: 3309354-3308824 (Counterclockwise)
Preceding gene: 91788994
Following gene: 91788982
Centisome position: 63.64
GC content: 66.48
Gene sequence:
>531_bases GTGGAAAGCATTCGAATCCTCGTCAGCCTTCACGACCAGGCACTGCGCCTCTACTGTGGCGGCGTGCTTGTGCGTGCGTA TCCGGTATCGACCGCCAGGAACGGCCCCGGCGAACTGGAAGGCAGCGCCTGCACGCCGCGGGGCGCTCACGTCATTCGGG CAAAGATAGGCGCGGGCTGCGAGGCAGGGACGGTATTTGTCGCACGCAGACCTACGGGGGAGATGTTTTCAGCGGGGCTG GCCGAGGCGAATCCGGACAGGGACTGGATACTGACCCGCATTCTCTGGCTCTGCGGCCGCGAGCCGGGCAAGAACCGCTT TGGCGCGGTCGACACCATGCGCCGGTACATCTACATCCACGGATGCCCGGACGGCCTGCCCATGGGCGAGCCCTTGTCTC TCGGCTGCGTGCGCATGAGAAACGCGGACATCGTGGAGCTGTTCGACCTCGTGGAGCCCGGCACCGAGGTATGGATTCAG GCCGGGCCGGCTGCTGATGCCGATCCGCCCGGCATCCCGGCGCCACGCTAG
Upstream 100 bases:
>100_bases AGGAACAGGCGCTCAAGGACGGTTTGCTCAATGAAAGCTGAAAGCGCATTGTCGGGCAGCGCCTCGGCAAGTTTGCGCAT GTTGTGATGTGACACGAGAC
Downstream 100 bases:
>100_bases CGCAAATAGCTCCGGTTCAGCCGCACTTCCAGCTTTTTCTGCAGCGTTTCAAACGATGCGCTCATGGCCCAGTAAATCGC GGCCGCCGCCAGGTACAACG
Product: ErfK/YbiS/YcfS/YnhG
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Superfamily; ErfK/SrfK Family Protein; ErfK/YbiS/YcfS/YnhG Protein
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MESIRILVSLHDQALRLYCGGVLVRAYPVSTARNGPGELEGSACTPRGAHVIRAKIGAGCEAGTVFVARRPTGEMFSAGL AEANPDRDWILTRILWLCGREPGKNRFGAVDTMRRYIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQ AGPAADADPPGIPAPR
Sequences:
>Translated_176_residues MESIRILVSLHDQALRLYCGGVLVRAYPVSTARNGPGELEGSACTPRGAHVIRAKIGAGCEAGTVFVARRPTGEMFSAGL AEANPDRDWILTRILWLCGREPGKNRFGAVDTMRRYIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQ AGPAADADPPGIPAPR >Mature_176_residues MESIRILVSLHDQALRLYCGGVLVRAYPVSTARNGPGELEGSACTPRGAHVIRAKIGAGCEAGTVFVARRPTGEMFSAGL AEANPDRDWILTRILWLCGREPGKNRFGAVDTMRRYIYIHGCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQ AGPAADADPPGIPAPR
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18952; Mature: 18952
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESIRILVSLHDQALRLYCGGVLVRAYPVSTARNGPGELEGSACTPRGAHVIRAKIGAGC CCCEEEEEEECHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC EAGTVFVARRPTGEMFSAGLAEANPDRDWILTRILWLCGREPGKNRFGAVDTMRRYIYIH CCCEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEE GCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQAGPAADADPPGIPAPR ECCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MESIRILVSLHDQALRLYCGGVLVRAYPVSTARNGPGELEGSACTPRGAHVIRAKIGAGC CCCEEEEEEECHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC EAGTVFVARRPTGEMFSAGLAEANPDRDWILTRILWLCGREPGKNRFGAVDTMRRYIYIH CCCEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEE GCPDGLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVWIQAGPAADADPPGIPAPR ECCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA