Click here to switch to the map view.

The map label for this gene is yiiZ [H]

Identifier: 91788967

GI number: 91788967

Start: 3279869

End: 3280861

Strand: Reverse

Name: yiiZ [H]

Synonym: Bpro_3107

Alternate gene names: 91788967

Gene position: 3280861-3279869 (Counterclockwise)

Preceding gene: 91788968

Following gene: 91788966

Centisome position: 63.09

GC content: 60.52

Gene sequence:

>993_bases
ATGACAAACAGAACTCCCCGCATTTCGGCTATTCGCTCGGCCGCCCTTGCCGCTTTGCTGGCGGGCCTTGGCATGGGTGC
TGCCCAGGCCACCGAGTTCCGCTCGGCCGACACGCACAACGCTGATGACTACCCCACCGTCGCGGCCGTCAAGTACATGG
GCGAGCTTCTCGAGAAAAAGAGCGGCGGCAAACACAAGATCAAGGTTTTCAACAAGCAGGCACTCGGCAGCGAGAAGGAA
ACCATCGACCAGGTGAAGATTGGCGCGCTCGACTTCACGCGCGTCAATGTCGGCCCGATGAACGCCATCTGTCCGCTGAC
CCAGGTGCCGACAATGCCCTTCCTGTTCAGCTCCATCGCGCACATGCGCAAGTCGCTCGACGGCCCGGTCGGTGACGAGA
TCCTGAAGAGCTGCGAGTCTGCCGGTTTCATCGGCCTGGCTTTTTATGACAGTGGTGCACGCTCCATCTACGCGAAGAAG
CCGATCAGGACCGTCGCTGATGCCAAGGGCCTGAAGATCCGTGTCCAGCAATCCGACCTCTGGGTCGCGCTGGTCAGCGC
GATGGGCGCCAACGCCACCCCCATGCCTTATGGCGAGGTCTATACCGGCCTGAAGACCGGCCTGATTGACGCCGCCGAGA
ACAACATTCCGTCGTTCGACACGGCCAAACACGTGGAAGCCGTGAAGGTCTACTCCAAGACCGAGCATTCGATGGCGCCC
GAGATCCTGGTGATGTCCAAGATCATCTATGACAAGCTGCCCAAGGCCGAGCAGGACATGATCCGCGCGGCGGCCAAGGA
GTCGGTGGCATTCGAGCGCCAGAAGTGGGACGAGCAGGAAGCGAAGTCACTGGCCAATGTCAAGGCCGCTGGCGCCGAGA
TCGTGGAAGTGGACAAGAAGTCGTTCCAGGCCGTAATGGGCCCGGTCTACGACAAGTTCATGACCACGCCCGACATGAAG
CGCCTCGTTAAAGCGGTCCAGGACACCAAGTAA

Upstream 100 bases:

>100_bases
GTTCGTGGCCCATCCCGGCGTTCGCGGCATTGCCGAAACGCCGTTTTCGCAGTAGCTTTCCCATTTCAACGCGCAACCAT
AACTCAGGAGACATCGCATC

Downstream 100 bases:

>100_bases
GCTGCCGGGCAGGCCATGCCTCCTGCCGCAAGGCGGGGGGCGCCTGTCTTCCTGTCCTTTGCGGGGCGGTGGGACGGCCG
GGTCAGAAAAAGATTAATCC

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTNRTPRISAIRSAALAALLAGLGMGAAQATEFRSADTHNADDYPTVAAVKYMGELLEKKSGGKHKIKVFNKQALGSEKE
TIDQVKIGALDFTRVNVGPMNAICPLTQVPTMPFLFSSIAHMRKSLDGPVGDEILKSCESAGFIGLAFYDSGARSIYAKK
PIRTVADAKGLKIRVQQSDLWVALVSAMGANATPMPYGEVYTGLKTGLIDAAENNIPSFDTAKHVEAVKVYSKTEHSMAP
EILVMSKIIYDKLPKAEQDMIRAAAKESVAFERQKWDEQEAKSLANVKAAGAEIVEVDKKSFQAVMGPVYDKFMTTPDMK
RLVKAVQDTK

Sequences:

>Translated_330_residues
MTNRTPRISAIRSAALAALLAGLGMGAAQATEFRSADTHNADDYPTVAAVKYMGELLEKKSGGKHKIKVFNKQALGSEKE
TIDQVKIGALDFTRVNVGPMNAICPLTQVPTMPFLFSSIAHMRKSLDGPVGDEILKSCESAGFIGLAFYDSGARSIYAKK
PIRTVADAKGLKIRVQQSDLWVALVSAMGANATPMPYGEVYTGLKTGLIDAAENNIPSFDTAKHVEAVKVYSKTEHSMAP
EILVMSKIIYDKLPKAEQDMIRAAAKESVAFERQKWDEQEAKSLANVKAAGAEIVEVDKKSFQAVMGPVYDKFMTTPDMK
RLVKAVQDTK
>Mature_329_residues
TNRTPRISAIRSAALAALLAGLGMGAAQATEFRSADTHNADDYPTVAAVKYMGELLEKKSGGKHKIKVFNKQALGSEKET
IDQVKIGALDFTRVNVGPMNAICPLTQVPTMPFLFSSIAHMRKSLDGPVGDEILKSCESAGFIGLAFYDSGARSIYAKKP
IRTVADAKGLKIRVQQSDLWVALVSAMGANATPMPYGEVYTGLKTGLIDAAENNIPSFDTAKHVEAVKVYSKTEHSMAPE
ILVMSKIIYDKLPKAEQDMIRAAAKESVAFERQKWDEQEAKSLANVKAAGAEIVEVDKKSFQAVMGPVYDKFMTTPDMKR
LVKAVQDTK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=329, Percent_Identity=33.7386018237082, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35808; Mature: 35677

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRTPRISAIRSAALAALLAGLGMGAAQATEFRSADTHNADDYPTVAAVKYMGELLEKK
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
SGGKHKIKVFNKQALGSEKETIDQVKIGALDFTRVNVGPMNAICPLTQVPTMPFLFSSIA
CCCCEEEEEECHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHCCCHHHHHHHHH
HMRKSLDGPVGDEILKSCESAGFIGLAFYDSGARSIYAKKPIRTVADAKGLKIRVQQSDL
HHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCHHHHHCCCCCEEEEECCHH
WVALVSAMGANATPMPYGEVYTGLKTGLIDAAENNIPSFDTAKHVEAVKVYSKTEHSMAP
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
EILVMSKIIYDKLPKAEQDMIRAAAKESVAFERQKWDEQEAKSLANVKAAGAEIVEVDKK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
SFQAVMGPVYDKFMTTPDMKRLVKAVQDTK
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNRTPRISAIRSAALAALLAGLGMGAAQATEFRSADTHNADDYPTVAAVKYMGELLEKK
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
SGGKHKIKVFNKQALGSEKETIDQVKIGALDFTRVNVGPMNAICPLTQVPTMPFLFSSIA
CCCCEEEEEECHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHCCHHHCCCHHHHHHHHH
HMRKSLDGPVGDEILKSCESAGFIGLAFYDSGARSIYAKKPIRTVADAKGLKIRVQQSDL
HHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCHHHHHCCCCCEEEEECCHH
WVALVSAMGANATPMPYGEVYTGLKTGLIDAAENNIPSFDTAKHVEAVKVYSKTEHSMAP
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
EILVMSKIIYDKLPKAEQDMIRAAAKESVAFERQKWDEQEAKSLANVKAAGAEIVEVDKK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHH
SFQAVMGPVYDKFMTTPDMKRLVKAVQDTK
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]