Click here to switch to the map view.

The map label for this gene is ygiK [H]

Identifier: 91788965

GI number: 91788965

Start: 3278000

End: 3279289

Strand: Reverse

Name: ygiK [H]

Synonym: Bpro_3105

Alternate gene names: 91788965

Gene position: 3279289-3278000 (Counterclockwise)

Preceding gene: 91788966

Following gene: 91788964

Centisome position: 63.06

GC content: 64.19

Gene sequence:

>1290_bases
ATGGAACTGACCGTACTCGCCCTGAGCTTCACGCTCTTCCTCGTGATTGGCGTGCCGGTCGCGTTTGCCATCGGCCTGTC
GTCGGTCGCCACCATCATCGCCGCCGGTCTGCCGATTGCGGTGGTGTTCCAGAAAATGGTCGGCGGCATGCAGGTGTTCT
CGTTCCTGGCTATTCCGTTTTTTGTCTTCGCCGGCGAGCTGATGCTCTACGGCGGCATTGCCGAGCGCATCGTGCGCTTC
GCCAACAGCCTGGTCGGCCATGTGCGCGGCGGCCTGGGCATGAGCAACGTGATCGGCTGCACGCTGTTCGGGGGCGTCGC
CGGCTCGCCGCTGGCCGATGTGTCAGCCATGGGCTCGGTGATGATTCCGCTGATGAAGAAGGAAGGCTATGACGCCGACT
ACGCGGTCAACGTCACCACACACGCGGCACTGGTGGGCGCCATCATGCCGACCTCGCACAACATGATCATCTTCACGCTG
GCCACCTCGGGCATCGCCTCGGTCAGTGTGCTGAGCCTGATCCTCGCGGGCCTGGTTCCGGCGGTGATCCTGACCCTGTG
CAACCTGGGCGCTGCCTACTACGTGGCCGTCAAGCGCGGCTACCCGACACACGGCGCCTTCCCCGGCTGGGGCGAGGTGT
TGCGCGCCTTCGGCGCCGCGCTGCCCGGCCTGCTGGTGGTGGTGATCATCCTCGCCGGCATCCTGTCGGGTGCATTCACG
GCCACCGAGTCGGCATCGATCGCGGTCGCCTGGGCGCTGGCGATCACAGTGCTTGTCTACAAGACGCTGACGTGGAACAA
CTTTCTCAAGGCTTGCGCCAAAGCCTGCAAGACCACCGGTGTGGTCCTGCTGCTGATCGGCATCTCGGCCGCCTTCGGCT
ACTTCATGGCGCTGTACGAGGTGCCGCAACTGACCGGCGAGCTGATGAAGTCGGTGAGCAGCGAGCCCTGGGTCATCTTC
CTGATGATCAACGTGCTGCTGTTCATCCTCGGCACCTTTCTCGACATGGCGGCGACCATCCTGATCTGCACGCCGATCTT
CATGCCGATTGCGATGCAGTTCGGCATGGACCCGGTGCAGTTCGGCATCGTGATGCTGATCAACTGCGCGTTGGGCCTGA
ACACGCCGCCGGTCGGGTCGGTGCAATTCGTCGGCTGCGCCATTGGCGGCATCTCGGTCGGGCAGGTGATGCGCTCGATC
GGCCCGTTCTACGGCGCGCTCGGCGTCTGTCTGCTGCTGGTGACCTACGTGCCGGCCTTCTCGCTGTGGCTGCCGGCGCT
GTACAAGTAA

Upstream 100 bases:

>100_bases
GCATCGACTACCTGCCGGTGGTGATTGCCGGCGTGCTGATCGTCCTGTTTTCAATTGAACATGTGATCGCGCTGGTGCGC
GGCCAAGTAGTGGAGCCCGC

Downstream 100 bases:

>100_bases
GCGTTTTCGTCAGAAGATAGTTTCACCATGACCTCCCCCAATCCCCCCACACAGGCCGCAGCAAAGGCCGCGCCGCAGGC
CGCTCCAGGCACCGCGACGA

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MELTVLALSFTLFLVIGVPVAFAIGLSSVATIIAAGLPIAVVFQKMVGGMQVFSFLAIPFFVFAGELMLYGGIAERIVRF
ANSLVGHVRGGLGMSNVIGCTLFGGVAGSPLADVSAMGSVMIPLMKKEGYDADYAVNVTTHAALVGAIMPTSHNMIIFTL
ATSGIASVSVLSLILAGLVPAVILTLCNLGAAYYVAVKRGYPTHGAFPGWGEVLRAFGAALPGLLVVVIILAGILSGAFT
ATESASIAVAWALAITVLVYKTLTWNNFLKACAKACKTTGVVLLLIGISAAFGYFMALYEVPQLTGELMKSVSSEPWVIF
LMINVLLFILGTFLDMAATILICTPIFMPIAMQFGMDPVQFGIVMLINCALGLNTPPVGSVQFVGCAIGGISVGQVMRSI
GPFYGALGVCLLLVTYVPAFSLWLPALYK

Sequences:

>Translated_429_residues
MELTVLALSFTLFLVIGVPVAFAIGLSSVATIIAAGLPIAVVFQKMVGGMQVFSFLAIPFFVFAGELMLYGGIAERIVRF
ANSLVGHVRGGLGMSNVIGCTLFGGVAGSPLADVSAMGSVMIPLMKKEGYDADYAVNVTTHAALVGAIMPTSHNMIIFTL
ATSGIASVSVLSLILAGLVPAVILTLCNLGAAYYVAVKRGYPTHGAFPGWGEVLRAFGAALPGLLVVVIILAGILSGAFT
ATESASIAVAWALAITVLVYKTLTWNNFLKACAKACKTTGVVLLLIGISAAFGYFMALYEVPQLTGELMKSVSSEPWVIF
LMINVLLFILGTFLDMAATILICTPIFMPIAMQFGMDPVQFGIVMLINCALGLNTPPVGSVQFVGCAIGGISVGQVMRSI
GPFYGALGVCLLLVTYVPAFSLWLPALYK
>Mature_429_residues
MELTVLALSFTLFLVIGVPVAFAIGLSSVATIIAAGLPIAVVFQKMVGGMQVFSFLAIPFFVFAGELMLYGGIAERIVRF
ANSLVGHVRGGLGMSNVIGCTLFGGVAGSPLADVSAMGSVMIPLMKKEGYDADYAVNVTTHAALVGAIMPTSHNMIIFTL
ATSGIASVSVLSLILAGLVPAVILTLCNLGAAYYVAVKRGYPTHGAFPGWGEVLRAFGAALPGLLVVVIILAGILSGAFT
ATESASIAVAWALAITVLVYKTLTWNNFLKACAKACKTTGVVLLLIGISAAFGYFMALYEVPQLTGELMKSVSSEPWVIF
LMINVLLFILGTFLDMAATILICTPIFMPIAMQFGMDPVQFGIVMLINCALGLNTPPVGSVQFVGCAIGGISVGQVMRSI
GPFYGALGVCLLLVTYVPAFSLWLPALYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=389, Percent_Identity=31.1053984575836, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44764; Mature: 44764

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTVLALSFTLFLVIGVPVAFAIGLSSVATIIAAGLPIAVVFQKMVGGMQVFSFLAIPF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FVFAGELMLYGGIAERIVRFANSLVGHVRGGLGMSNVIGCTLFGGVAGSPLADVSAMGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
MIPLMKKEGYDADYAVNVTTHAALVGAIMPTSHNMIIFTLATSGIASVSVLSLILAGLVP
HHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AVILTLCNLGAAYYVAVKRGYPTHGAFPGWGEVLRAFGAALPGLLVVVIILAGILSGAFT
HHHHHHHHCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ATESASIAVAWALAITVLVYKTLTWNNFLKACAKACKTTGVVLLLIGISAAFGYFMALYE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPQLTGELMKSVSSEPWVIFLMINVLLFILGTFLDMAATILICTPIFMPIAMQFGMDPVQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FGIVMLINCALGLNTPPVGSVQFVGCAIGGISVGQVMRSIGPFYGALGVCLLLVTYVPAF
HHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLWLPALYK
HHHHHHHCC
>Mature Secondary Structure
MELTVLALSFTLFLVIGVPVAFAIGLSSVATIIAAGLPIAVVFQKMVGGMQVFSFLAIPF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
FVFAGELMLYGGIAERIVRFANSLVGHVRGGLGMSNVIGCTLFGGVAGSPLADVSAMGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
MIPLMKKEGYDADYAVNVTTHAALVGAIMPTSHNMIIFTLATSGIASVSVLSLILAGLVP
HHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AVILTLCNLGAAYYVAVKRGYPTHGAFPGWGEVLRAFGAALPGLLVVVIILAGILSGAFT
HHHHHHHHCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ATESASIAVAWALAITVLVYKTLTWNNFLKACAKACKTTGVVLLLIGISAAFGYFMALYE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPQLTGELMKSVSSEPWVIFLMINVLLFILGTFLDMAATILICTPIFMPIAMQFGMDPVQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
FGIVMLINCALGLNTPPVGSVQFVGCAIGGISVGQVMRSIGPFYGALGVCLLLVTYVPAF
HHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLWLPALYK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]