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The map label for this gene is 91788947

Identifier: 91788947

GI number: 91788947

Start: 3255245

End: 3256258

Strand: Reverse

Name: 91788947

Synonym: Bpro_3087

Alternate gene names: NA

Gene position: 3256258-3255245 (Counterclockwise)

Preceding gene: 91788949

Following gene: 91788946

Centisome position: 62.62

GC content: 64.69

Gene sequence:

>1014_bases
ATGGCAACTCGGCGCTGCGCCCTCGCTGTAGCGACGGGTATTTTTGAGCACCTCCCCGGTCAACCCATGCTGCAAGCTTT
TTACGCCGATAACTTCGTGCTGCCCCTGCCGCCCGGGCACCGGTTTCCCATGGGCAAATACAAATTGCTGCGGGACCGTC
TCATCAGCGAGTTGCCTCATGTGCAGATGGCCCAGGCGCCAGCCGCCAGCGACGGTGAACTCGCCCTGGTGCATACGCCC
GCTTACATTGAGGCGATCACCCACGGTAGCTTGCCCCCTGCGGCCCAGCGCGAAATCGGATTTCCGTGGAGTCCCGGGAT
GGCCGAACGGGCACGCCGCTCGGCCGGCGCCACGGTGGCCGCGGCGCGGGTGGCGCTGGGCACCGGTACGCGGCCCCAGG
GTGTCGCGGCCAATATGGCGGGCGGCACACACCATGCCTATGCGCACAAGGGCAGTGGATTTTGCGTGTTCAACGACTCG
GCCGTGACGGCGCGGCTGATGCAGGCAGAGTGGGGCCGGCGGCATCGGCCGGATCGCAAACCGCTGCAGGTGGCGGTGAT
TGACCTGGACGTGCACCAGGGCAACGGTACCGCGCACATCTTTGCCAACGATCCGAGCGTGTTCACGCTGTCATTGCATG
GGCAAAAGAATTTCCCCTTTCGCAAGGAGGCGAGCGACCTGGATGTGGAGTTGCCCGATGGTTGTACCGATGCGCCGTAT
CTGCAGGCGCTCGAGCATGCCCTCGACGAACTGGATCGGCGCTTCGACCCCGGCCTGGTGGTGTTCCTCGCCGGTGCCGA
TCCTTTCGAGGGCGACCGGCTGGGGCGTCTGGCGCTCAGCTTTGATGGGCTGGAAGCCCGTGACCGCCGCGTCTTTGACT
GGGCCTGGCAACGCCGCATCCCCCTGACGTTTTCCATGGCAGGCGGCTACGGCGTGAACATTGATGAAACCGTGCAGGTG
CAGATGAACACCTACCGCGTCGCGCTCGAGTACTGGGCCAAATGGAATCCCTGA

Upstream 100 bases:

>100_bases
TTCTTTAGGGGTAACGCCCTAGTTTGGGCCTTTCGTCTTTCGTGGTACCCATGGACTTCTTGCCGGGCCTTTCACACTCG
CGGGCGCGCTTCGGGCCACA

Downstream 100 bases:

>100_bases
CCACCTTCCCGCCAAAAAGTAAGGCGAGGTCTTCACCCAGCAGGGGCCGGGCCGCAGGCGCAGCGGCCCCCGAGGGGCAG
GAAGCTGCGCGCGGCGATCG

Product: histone deacetylase superfamily protein protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MATRRCALAVATGIFEHLPGQPMLQAFYADNFVLPLPPGHRFPMGKYKLLRDRLISELPHVQMAQAPAASDGELALVHTP
AYIEAITHGSLPPAAQREIGFPWSPGMAERARRSAGATVAAARVALGTGTRPQGVAANMAGGTHHAYAHKGSGFCVFNDS
AVTARLMQAEWGRRHRPDRKPLQVAVIDLDVHQGNGTAHIFANDPSVFTLSLHGQKNFPFRKEASDLDVELPDGCTDAPY
LQALEHALDELDRRFDPGLVVFLAGADPFEGDRLGRLALSFDGLEARDRRVFDWAWQRRIPLTFSMAGGYGVNIDETVQV
QMNTYRVALEYWAKWNP

Sequences:

>Translated_337_residues
MATRRCALAVATGIFEHLPGQPMLQAFYADNFVLPLPPGHRFPMGKYKLLRDRLISELPHVQMAQAPAASDGELALVHTP
AYIEAITHGSLPPAAQREIGFPWSPGMAERARRSAGATVAAARVALGTGTRPQGVAANMAGGTHHAYAHKGSGFCVFNDS
AVTARLMQAEWGRRHRPDRKPLQVAVIDLDVHQGNGTAHIFANDPSVFTLSLHGQKNFPFRKEASDLDVELPDGCTDAPY
LQALEHALDELDRRFDPGLVVFLAGADPFEGDRLGRLALSFDGLEARDRRVFDWAWQRRIPLTFSMAGGYGVNIDETVQV
QMNTYRVALEYWAKWNP
>Mature_336_residues
ATRRCALAVATGIFEHLPGQPMLQAFYADNFVLPLPPGHRFPMGKYKLLRDRLISELPHVQMAQAPAASDGELALVHTPA
YIEAITHGSLPPAAQREIGFPWSPGMAERARRSAGATVAAARVALGTGTRPQGVAANMAGGTHHAYAHKGSGFCVFNDSA
VTARLMQAEWGRRHRPDRKPLQVAVIDLDVHQGNGTAHIFANDPSVFTLSLHGQKNFPFRKEASDLDVELPDGCTDAPYL
QALEHALDELDRRFDPGLVVFLAGADPFEGDRLGRLALSFDGLEARDRRVFDWAWQRRIPLTFSMAGGYGVNIDETVQVQ
MNTYRVALEYWAKWNP

Specific function: Putative deacetylase [H]

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone deacetylase family [H]

Homologues:

Organism=Homo sapiens, GI217272877, Length=321, Percent_Identity=29.2834890965732, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI209862883, Length=276, Percent_Identity=30.7971014492754, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI8923769, Length=280, Percent_Identity=30, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI13128860, Length=300, Percent_Identity=26.3333333333333, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI13128864, Length=310, Percent_Identity=30, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI13128862, Length=223, Percent_Identity=28.2511210762332, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI293336691, Length=271, Percent_Identity=28.4132841328413, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI20070354, Length=232, Percent_Identity=32.3275862068966, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI30795204, Length=179, Percent_Identity=30.1675977653631, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI17158039, Length=179, Percent_Identity=30.1675977653631, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI262073092, Length=208, Percent_Identity=31.25, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI30795202, Length=179, Percent_Identity=30.1675977653631, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI62750349, Length=145, Percent_Identity=31.7241379310345, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI62750347, Length=145, Percent_Identity=31.7241379310345, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI262073088, Length=199, Percent_Identity=30.6532663316583, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI226529806, Length=169, Percent_Identity=31.9526627218935, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI148539870, Length=145, Percent_Identity=31.7241379310345, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI169234807, Length=145, Percent_Identity=31.7241379310345, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193207430, Length=257, Percent_Identity=33.4630350194552, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17534739, Length=311, Percent_Identity=27.0096463022508, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17561978, Length=222, Percent_Identity=31.981981981982, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17508561, Length=222, Percent_Identity=31.0810810810811, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI193209491, Length=316, Percent_Identity=27.5316455696203, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17540332, Length=185, Percent_Identity=31.3513513513514, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193206283, Length=185, Percent_Identity=31.3513513513514, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17540334, Length=185, Percent_Identity=31.3513513513514, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17537347, Length=286, Percent_Identity=25.5244755244755, Blast_Score=68, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323999, Length=298, Percent_Identity=28.8590604026846, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321244, Length=270, Percent_Identity=27.4074074074074, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324307, Length=235, Percent_Identity=25.9574468085106, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325325, Length=161, Percent_Identity=27.9503105590062, Blast_Score=66, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24649807, Length=221, Percent_Identity=33.9366515837104, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24657891, Length=300, Percent_Identity=26.3333333333333, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281360899, Length=276, Percent_Identity=28.6231884057971, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24642142, Length=276, Percent_Identity=28.6231884057971, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24642144, Length=276, Percent_Identity=28.6231884057971, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24642146, Length=276, Percent_Identity=28.6231884057971, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24644244, Length=246, Percent_Identity=24.390243902439, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000286 [H]

Pfam domain/function: PF00850 Hist_deacetyl [H]

EC number: NA

Molecular weight: Translated: 37042; Mature: 36911

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRRCALAVATGIFEHLPGQPMLQAFYADNFVLPLPPGHRFPMGKYKLLRDRLISELPH
CCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
VQMAQAPAASDGELALVHTPAYIEAITHGSLPPAAQREIGFPWSPGMAERARRSAGATVA
CEECCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEE
AARVALGTGTRPQGVAANMAGGTHHAYAHKGSGFCVFNDSAVTARLMQAEWGRRHRPDRK
EEEEEECCCCCCCCCEEECCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
PLQVAVIDLDVHQGNGTAHIFANDPSVFTLSLHGQKNFPFRKEASDLDVELPDGCTDAPY
CEEEEEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCHH
LQALEHALDELDRRFDPGLVVFLAGADPFEGDRLGRLALSFDGLEARDRRVFDWAWQRRI
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHCCC
PLTFSMAGGYGVNIDETVQVQMNTYRVALEYWAKWNP
CEEEEECCCCCCCCCCEEEEEEEEEEEEEEEHHCCCC
>Mature Secondary Structure 
ATRRCALAVATGIFEHLPGQPMLQAFYADNFVLPLPPGHRFPMGKYKLLRDRLISELPH
CCHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCC
VQMAQAPAASDGELALVHTPAYIEAITHGSLPPAAQREIGFPWSPGMAERARRSAGATVA
CEECCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCEEE
AARVALGTGTRPQGVAANMAGGTHHAYAHKGSGFCVFNDSAVTARLMQAEWGRRHRPDRK
EEEEEECCCCCCCCCEEECCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCC
PLQVAVIDLDVHQGNGTAHIFANDPSVFTLSLHGQKNFPFRKEASDLDVELPDGCTDAPY
CEEEEEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCHH
LQALEHALDELDRRFDPGLVVFLAGADPFEGDRLGRLALSFDGLEARDRRVFDWAWQRRI
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHCCC
PLTFSMAGGYGVNIDETVQVQMNTYRVALEYWAKWNP
CEEEEECCCCCCCCCCEEEEEEEEEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7678591 [H]