Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788946
Identifier: 91788946
GI number: 91788946
Start: 3254578
End: 3255021
Strand: Reverse
Name: 91788946
Synonym: Bpro_3086
Alternate gene names: NA
Gene position: 3255021-3254578 (Counterclockwise)
Preceding gene: 91788947
Following gene: 91788945
Centisome position: 62.59
GC content: 63.06
Gene sequence:
>444_bases ATGACCTCCCCGATGCGCCCCCAGGCAGAGCCCCGCAGTGCCTACAAAGCTTTTCGCGACATCGGCACGCGCTGGTCCGA CAACGATCTGTATGGCCACGTCAACAACGTCGTTTACTACAGCTGGTTTGACACGGCCGTCAACGGTTTGCTGATTGAAC GCGGTGCCCTTGACATTCACGCGGGCAGCGTGATTGGCCTGGTGGTCGAGACCCAGTGCAATTACTTCGCCCCTCTCGCG TTTCCCGAGCCGGTGGTGGCGGGCATCCGGGTGGCCCGCGTGGGCGCGTCCAGTGCGCGCTACGAGGTGGCGCTGTTCCC GCAGGATGATGCGCAGGCGTGTGCGGCCAAAGGCCATTTCATCCATGTGTATGTCGACCGCGCCACGCGCCGCCCGGTGC CCTTGCCCCCTCAATTACTTTGCGTACTGGAGACCCTCAAGTGA
Upstream 100 bases:
>100_bases GGCCGCGGAACCGGCTTGGCCGGGCCGCAGGCGCAGCGCCCCCTCGGGGGGCAGCGAACCACACGAAGTGGGGAGCGTGG GGGCTGGCAAAATAACCCTC
Downstream 100 bases:
>100_bases AGCAAGCCGTTTTTCATTCCCCCCCTGTTGTTGCCGGCGACTTTGCCGCAATCGATGCTTCGGGCAGCGTGTTTGCCCAT CCCGTCAACGCGGTGGACCA
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase; Thioesterase Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTSPMRPQAEPRSAYKAFRDIGTRWSDNDLYGHVNNVVYYSWFDTAVNGLLIERGALDIHAGSVIGLVVETQCNYFAPLA FPEPVVAGIRVARVGASSARYEVALFPQDDAQACAAKGHFIHVYVDRATRRPVPLPPQLLCVLETLK
Sequences:
>Translated_147_residues MTSPMRPQAEPRSAYKAFRDIGTRWSDNDLYGHVNNVVYYSWFDTAVNGLLIERGALDIHAGSVIGLVVETQCNYFAPLA FPEPVVAGIRVARVGASSARYEVALFPQDDAQACAAKGHFIHVYVDRATRRPVPLPPQLLCVLETLK >Mature_146_residues TSPMRPQAEPRSAYKAFRDIGTRWSDNDLYGHVNNVVYYSWFDTAVNGLLIERGALDIHAGSVIGLVVETQCNYFAPLAF PEPVVAGIRVARVGASSARYEVALFPQDDAQACAAKGHFIHVYVDRATRRPVPLPPQLLCVLETLK
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16246; Mature: 16115
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPMRPQAEPRSAYKAFRDIGTRWSDNDLYGHVNNVVYYSWFDTAVNGLLIERGALDIH CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEHHHHHCCEEEECCCEEEE AGSVIGLVVETQCNYFAPLAFPEPVVAGIRVARVGASSARYEVALFPQDDAQACAAKGHF CCCEEEEEEECCCCEEECCCCCCHHHHCEEEEECCCCCCCEEEEEECCCCHHHHHCCCCE IHVYVDRATRRPVPLPPQLLCVLETLK EEEEEECCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TSPMRPQAEPRSAYKAFRDIGTRWSDNDLYGHVNNVVYYSWFDTAVNGLLIERGALDIH CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEHHHHHCCEEEECCCEEEE AGSVIGLVVETQCNYFAPLAFPEPVVAGIRVARVGASSARYEVALFPQDDAQACAAKGHF CCCEEEEEEECCCCEEECCCCCCHHHHCEEEEECCCCCCCEEEEEECCCCHHHHHCCCCE IHVYVDRATRRPVPLPPQLLCVLETLK EEEEEECCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA