Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is pncB
Identifier: 91788940
GI number: 91788940
Start: 3248728
End: 3249915
Strand: Reverse
Name: pncB
Synonym: Bpro_3080
Alternate gene names: 91788940
Gene position: 3249915-3248728 (Counterclockwise)
Preceding gene: 91788941
Following gene: 91788939
Centisome position: 62.5
GC content: 60.19
Gene sequence:
>1188_bases ATGATCATCACCAGCCTGCTTGATACCGACCTGTACAAGTTCACCATGATGCAGGTGGTGTTGCACCAGTTTCCAGGTGC CGAGGTGGAGTACCGGTTCAAGTGCCGCAACGCCGGGGCGCCCGGCATAGGCAAGCTGGCACCTTATGTGAACGAAATCC GCGAAGAGATCCGCGGGTTGTGCAATTTGCGCTTTCAGGATGCCGAGCTGGCCTACCTGAAGGCCATGCGCTTCATCAAG AGCGACTTCGTCGATTTTCTGGGTATCTTCAAGCTCAACGAGAAATACGTGAGCGTGACGGCCTTGCCATCGGGCGAGAT CGAGGTGTCCATCAAGGGCCCCTGGCTGCACACCATCCTGTTTGAAATCCCGGTGCTGGCCATCATCAATGAGGTCTACT TTCGCAACACGCAAAAGCAGCCTGACCTGACCGAAGGCCGCAAACGCCTGGACACCAAGATACTGGAGCTGCAGGCCGAT GGCCTGCGCGAACTCAAGATCGCCGACTACGGCACGCGCCGGCGTTTCGGCAAGGTCTGGCACGAGGAAGTGTTGCGCAC GCTGGTGACCCGTCTGGGCACGGGCATGTCGGGCCAGCTCGCGGGGACCAGCAATGTGCTGTTTGCCATGAAGCTGGGCC TGACGCCGCTGGGCACCATGGCGCACGAATACCTGCAGGCCTGCCAGGCGCTCGGGCCGCGCCTGCGTGACAGCCAGGTC TTCGGTTTCGAATCGTGGGCCCGGGAGTACCGGGGTGACCTGGGGATTGCGCTGTCGGACGTATACGGCATGAGTGCCTT CCTGCGCGATTTCGACATGTACTTCTGCAAGCTGTTTGACGGGGCGCGCCATGACAGCGGCGACCCGTTCGAGTGGGGTG AGCGCATGCTCGCGCACTACGTTAAAAACCGCGTCGATCCCAGAACCAAGACGCTGATCTTCAGCGACGCGCTCACCGTG CCGCGCACCATTGAGCTGTACCAGCAGTTCAGGGGGCGTTGCCAGCTGGCTTTCGGCATAGGCACCAACCTGACCAACGA CCTGGGTTACGAGCCGCTGCAGATCGTCATCAAGATGATTCGCTGCAATGGCCAGCCGGTGGCCAAGCTGTCGGACACGC CCTCCAAAAACATGTGCGAGGACGAAAAGTACCTGGCCTATCTGCGTCAGGTCTTCGAGATTGGCTGA
Upstream 100 bases:
>100_bases GGCGGCGTGATCCCGCCCAATGCCACCTTGCTGTTTGAAGTCGACCTGCTGGCAACCTGAGCCTCTGCGTTTTCAGCCGC CCCGGAGCAAAGCCGCCACC
Downstream 100 bases:
>100_bases TGCCGGTATCCGGCGTTTCGCCAGGCGCAATGGCTACCTGGCGAGTGCCTGCCCTTGCCCGCTGGCCAGCGAGCGCGGGG CCATGCCCGCCACGAAAACT
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MIITSLLDTDLYKFTMMQVVLHQFPGAEVEYRFKCRNAGAPGIGKLAPYVNEIREEIRGLCNLRFQDAELAYLKAMRFIK SDFVDFLGIFKLNEKYVSVTALPSGEIEVSIKGPWLHTILFEIPVLAIINEVYFRNTQKQPDLTEGRKRLDTKILELQAD GLRELKIADYGTRRRFGKVWHEEVLRTLVTRLGTGMSGQLAGTSNVLFAMKLGLTPLGTMAHEYLQACQALGPRLRDSQV FGFESWAREYRGDLGIALSDVYGMSAFLRDFDMYFCKLFDGARHDSGDPFEWGERMLAHYVKNRVDPRTKTLIFSDALTV PRTIELYQQFRGRCQLAFGIGTNLTNDLGYEPLQIVIKMIRCNGQPVAKLSDTPSKNMCEDEKYLAYLRQVFEIG
Sequences:
>Translated_395_residues MIITSLLDTDLYKFTMMQVVLHQFPGAEVEYRFKCRNAGAPGIGKLAPYVNEIREEIRGLCNLRFQDAELAYLKAMRFIK SDFVDFLGIFKLNEKYVSVTALPSGEIEVSIKGPWLHTILFEIPVLAIINEVYFRNTQKQPDLTEGRKRLDTKILELQAD GLRELKIADYGTRRRFGKVWHEEVLRTLVTRLGTGMSGQLAGTSNVLFAMKLGLTPLGTMAHEYLQACQALGPRLRDSQV FGFESWAREYRGDLGIALSDVYGMSAFLRDFDMYFCKLFDGARHDSGDPFEWGERMLAHYVKNRVDPRTKTLIFSDALTV PRTIELYQQFRGRCQLAFGIGTNLTNDLGYEPLQIVIKMIRCNGQPVAKLSDTPSKNMCEDEKYLAYLRQVFEIG >Mature_395_residues MIITSLLDTDLYKFTMMQVVLHQFPGAEVEYRFKCRNAGAPGIGKLAPYVNEIREEIRGLCNLRFQDAELAYLKAMRFIK SDFVDFLGIFKLNEKYVSVTALPSGEIEVSIKGPWLHTILFEIPVLAIINEVYFRNTQKQPDLTEGRKRLDTKILELQAD GLRELKIADYGTRRRFGKVWHEEVLRTLVTRLGTGMSGQLAGTSNVLFAMKLGLTPLGTMAHEYLQACQALGPRLRDSQV FGFESWAREYRGDLGIALSDVYGMSAFLRDFDMYFCKLFDGARHDSGDPFEWGERMLAHYVKNRVDPRTKTLIFSDALTV PRTIELYQQFRGRCQLAFGIGTNLTNDLGYEPLQIVIKMIRCNGQPVAKLSDTPSKNMCEDEKYLAYLRQVFEIG
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family
Homologues:
Organism=Escherichia coli, GI1787162, Length=398, Percent_Identity=42.4623115577889, Blast_Score=336, Evalue=1e-93, Organism=Saccharomyces cerevisiae, GI6324783, Length=404, Percent_Identity=32.4257425742574, Blast_Score=195, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PNCB_POLSJ (Q128P8)
Other databases:
- EMBL: CP000316 - RefSeq: YP_549892.1 - ProteinModelPortal: Q128P8 - SMR: Q128P8 - STRING: Q128P8 - GeneID: 4014238 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_3080 - NMPDR: fig|296591.1.peg.2044 - eggNOG: COG1488 - HOGENOM: HBG325503 - OMA: GNTFYGK - PhylomeDB: Q128P8 - ProtClustDB: PRK05321 - BioCyc: PSP296591:BPRO_3080-MONOMER - GO: GO:0005737 - HAMAP: MF_00570 - InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 - PANTHER: PTHR11098:SF1 - PIRSF: PIRSF000484 - TIGRFAMs: TIGR01514
Pfam domain/function: PF04095 NAPRTase; SSF51690 Q_phspho_trans
EC number: =2.4.2.11
Molecular weight: Translated: 45100; Mature: 45100
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITSLLDTDLYKFTMMQVVLHQFPGAEVEYRFKCRNAGAPGIGKLAPYVNEIREEIRGL CEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH CNLRFQDAELAYLKAMRFIKSDFVDFLGIFKLNEKYVSVTALPSGEIEVSIKGPWLHTIL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHH FEIPVLAIINEVYFRNTQKQPDLTEGRKRLDTKILELQADGLRELKIADYGTRRRFGKVW HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH HEEVLRTLVTRLGTGMSGQLAGTSNVLFAMKLGLTPLGTMAHEYLQACQALGPRLRDSQV HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC FGFESWAREYRGDLGIALSDVYGMSAFLRDFDMYFCKLFDGARHDSGDPFEWGERMLAHY CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VKNRVDPRTKTLIFSDALTVPRTIELYQQFRGRCQLAFGIGTNLTNDLGYEPLQIVIKMI HHHCCCCCHHEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHH RCNGQPVAKLSDTPSKNMCEDEKYLAYLRQVFEIG HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIITSLLDTDLYKFTMMQVVLHQFPGAEVEYRFKCRNAGAPGIGKLAPYVNEIREEIRGL CEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH CNLRFQDAELAYLKAMRFIKSDFVDFLGIFKLNEKYVSVTALPSGEIEVSIKGPWLHTIL HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCHHHHHH FEIPVLAIINEVYFRNTQKQPDLTEGRKRLDTKILELQADGLRELKIADYGTRRRFGKVW HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH HEEVLRTLVTRLGTGMSGQLAGTSNVLFAMKLGLTPLGTMAHEYLQACQALGPRLRDSQV HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC FGFESWAREYRGDLGIALSDVYGMSAFLRDFDMYFCKLFDGARHDSGDPFEWGERMLAHY CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VKNRVDPRTKTLIFSDALTVPRTIELYQQFRGRCQLAFGIGTNLTNDLGYEPLQIVIKMI HHHCCCCCHHEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHH RCNGQPVAKLSDTPSKNMCEDEKYLAYLRQVFEIG HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA