Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788939
Identifier: 91788939
GI number: 91788939
Start: 3247168
End: 3248574
Strand: Reverse
Name: 91788939
Synonym: Bpro_3079
Alternate gene names: NA
Gene position: 3248574-3247168 (Counterclockwise)
Preceding gene: 91788940
Following gene: 91788938
Centisome position: 62.47
GC content: 61.34
Gene sequence:
>1407_bases ATGAGAGTTTTGCGCTGGTGTGCCGCCCTGGCCCTGCTGTGCTGTTTGCCCGGGCTGGCATTGGCCGCCGAGATCGACGG TACCAGGCTGCACTGGATATGGGCGATACCTTTCGTGGGAATTTTGCTGTCGATTGCCGTGATGCCGCTCGCGCTTCCGG CTTTTTGGCATCACCATTTCGGCAAGGTTTCAGCGGCCTGGGCACTGGCATTTTTTCTGCCGTTTGCCGCGGTCTTCGGG CCGGCTTTGGCGGGCAGCAGTTTTGTGCATGCGCTGCTGGCCGAATACGTTCCCTTTATCGTCTTGCTGACCGCGCTGTA CACCGTGTCCGGCGGCATTTTCATTCGGGGCAACCTGCATGGAAGCCCGGGCCTCAACACCGCGATTCTGGCAATCGGCA CCGTGCTGGCCAGCCTGATGGGAACCACCGGCGCGTCCATGTTGATGATTCGCCCGCTGATTCGGGCCAATGACAACCGC GTTCACAAGGCGCATGTGGTGGTGTTCTTCATTTTCCTGGTGTCCAACGCCGGCGGCTCGCTGACGCCGCTGGGAGACCC GCCCCTGTTTCTCGGTTTTCTGAAGGGTGTCGATTTCTTCTGGACCGTCAGCCACATCTTTCCGGAAACGCTGTTCCTGG CGGGCAGCCTGCTGGGCATTTTTTACCTGCTGGACCGCTGGTACTACAGCAAGGAGGGTGTGCTGCCGGTCGATCCCACC CCCGACACCCGGCGCATCGGCTTTGACGGCGCGCGGAATTTCTGGTTGCTGGCCGCCGTTGTGGCCCTGGTACTCGTTAG CGGTTTCTGGAAGTCCGCCGTGGTGTTCAATGTCCTGGGCACCGAGGTGGGCCTGCCGGGCCTGCTGCGCGACGTCGGCC TGGTGGCGGTGACCTTGATTTCCCTTCGCCTTACGCCGGACAGTGTCCATGCGGACAACCAGTTTTCATGGGGGCCGATG CAGGAAGTCGCCAAGCTGTTTGCCGGCATCTTTTTGACCATCATCCCGGTCATTGCCATGCTCAGGGCGGGCATCAACGG CCCGTTCAGCGCCATCATCTCGGCCGTGACCCGGCCCGATGGCCAGCCTGATCCGGCCATGTACTTCTGGGCAACCGGGG TGCTGAGTTCTTTCCTGGACAATGCGCCGACCTACCTGGTGTTCTTCAACACGGCGGGCGGCGACCCCCAAGCGCTGATG ACGACGCTGGCTCCTACGCTGGCGGCCATTTCAGCGGGTGCGGTGTTCATGGGTGCCAACTCCTACATTGGCAATGCCCC CAACCTGATGGTCAAGGCCGTGGCAGAAGACCGCGGTGTGCGTATGCCCGGCTTTTTTGGCTATATGGCCTGGTCGGGTG CGGTCCTGATTCCCCTGTTTGTCCTCATCACCTTCATCTGGTTCTAG
Upstream 100 bases:
>100_bases CTTGCCCGCTGGCCAGCGAGCGCGGGGCCATGCCCGCCACGAAAACTCTGGTCAGAAGTTGAGAAGTTGAACAAATGAAT AAAAGAATGAGGAGACAACA
Downstream 100 bases:
>100_bases TCGACCATTCCAGATTGACCATTCAAGCCAACCATTCAACCGTTCAAGCAAAGAAAGTCGAGATCTTCTCATGAGCAAAC CCAAAATTCTGGTCGCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MRVLRWCAALALLCCLPGLALAAEIDGTRLHWIWAIPFVGILLSIAVMPLALPAFWHHHFGKVSAAWALAFFLPFAAVFG PALAGSSFVHALLAEYVPFIVLLTALYTVSGGIFIRGNLHGSPGLNTAILAIGTVLASLMGTTGASMLMIRPLIRANDNR VHKAHVVVFFIFLVSNAGGSLTPLGDPPLFLGFLKGVDFFWTVSHIFPETLFLAGSLLGIFYLLDRWYYSKEGVLPVDPT PDTRRIGFDGARNFWLLAAVVALVLVSGFWKSAVVFNVLGTEVGLPGLLRDVGLVAVTLISLRLTPDSVHADNQFSWGPM QEVAKLFAGIFLTIIPVIAMLRAGINGPFSAIISAVTRPDGQPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPQALM TTLAPTLAAISAGAVFMGANSYIGNAPNLMVKAVAEDRGVRMPGFFGYMAWSGAVLIPLFVLITFIWF
Sequences:
>Translated_468_residues MRVLRWCAALALLCCLPGLALAAEIDGTRLHWIWAIPFVGILLSIAVMPLALPAFWHHHFGKVSAAWALAFFLPFAAVFG PALAGSSFVHALLAEYVPFIVLLTALYTVSGGIFIRGNLHGSPGLNTAILAIGTVLASLMGTTGASMLMIRPLIRANDNR VHKAHVVVFFIFLVSNAGGSLTPLGDPPLFLGFLKGVDFFWTVSHIFPETLFLAGSLLGIFYLLDRWYYSKEGVLPVDPT PDTRRIGFDGARNFWLLAAVVALVLVSGFWKSAVVFNVLGTEVGLPGLLRDVGLVAVTLISLRLTPDSVHADNQFSWGPM QEVAKLFAGIFLTIIPVIAMLRAGINGPFSAIISAVTRPDGQPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPQALM TTLAPTLAAISAGAVFMGANSYIGNAPNLMVKAVAEDRGVRMPGFFGYMAWSGAVLIPLFVLITFIWF >Mature_468_residues MRVLRWCAALALLCCLPGLALAAEIDGTRLHWIWAIPFVGILLSIAVMPLALPAFWHHHFGKVSAAWALAFFLPFAAVFG PALAGSSFVHALLAEYVPFIVLLTALYTVSGGIFIRGNLHGSPGLNTAILAIGTVLASLMGTTGASMLMIRPLIRANDNR VHKAHVVVFFIFLVSNAGGSLTPLGDPPLFLGFLKGVDFFWTVSHIFPETLFLAGSLLGIFYLLDRWYYSKEGVLPVDPT PDTRRIGFDGARNFWLLAAVVALVLVSGFWKSAVVFNVLGTEVGLPGLLRDVGLVAVTLISLRLTPDSVHADNQFSWGPM QEVAKLFAGIFLTIIPVIAMLRAGINGPFSAIISAVTRPDGQPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPQALM TTLAPTLAAISAGAVFMGANSYIGNAPNLMVKAVAEDRGVRMPGFFGYMAWSGAVLIPLFVLITFIWF
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50245; Mature: 50245
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLRWCAALALLCCLPGLALAAEIDGTRLHWIWAIPFVGILLSIAVMPLALPAFWHHHF CHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH GKVSAAWALAFFLPFAAVFGPALAGSSFVHALLAEYVPFIVLLTALYTVSGGIFIRGNLH HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GSPGLNTAILAIGTVLASLMGTTGASMLMIRPLIRANDNRVHKAHVVVFFIFLVSNAGGS CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC LTPLGDPPLFLGFLKGVDFFWTVSHIFPETLFLAGSLLGIFYLLDRWYYSKEGVLPVDPT CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC PDTRRIGFDGARNFWLLAAVVALVLVSGFWKSAVVFNVLGTEVGLPGLLRDVGLVAVTLI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLRLTPDSVHADNQFSWGPMQEVAKLFAGIFLTIIPVIAMLRAGINGPFSAIISAVTRPD HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC GQPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPQALMTTLAPTLAAISAGAVFMGAN CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCC SYIGNAPNLMVKAVAEDRGVRMPGFFGYMAWSGAVLIPLFVLITFIWF CCCCCCCCHHHEEHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHC >Mature Secondary Structure MRVLRWCAALALLCCLPGLALAAEIDGTRLHWIWAIPFVGILLSIAVMPLALPAFWHHHF CHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH GKVSAAWALAFFLPFAAVFGPALAGSSFVHALLAEYVPFIVLLTALYTVSGGIFIRGNLH HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GSPGLNTAILAIGTVLASLMGTTGASMLMIRPLIRANDNRVHKAHVVVFFIFLVSNAGGS CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC LTPLGDPPLFLGFLKGVDFFWTVSHIFPETLFLAGSLLGIFYLLDRWYYSKEGVLPVDPT CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC PDTRRIGFDGARNFWLLAAVVALVLVSGFWKSAVVFNVLGTEVGLPGLLRDVGLVAVTLI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SLRLTPDSVHADNQFSWGPMQEVAKLFAGIFLTIIPVIAMLRAGINGPFSAIISAVTRPD HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC GQPDPAMYFWATGVLSSFLDNAPTYLVFFNTAGGDPQALMTTLAPTLAAISAGAVFMGAN CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCC SYIGNAPNLMVKAVAEDRGVRMPGFFGYMAWSGAVLIPLFVLITFIWF CCCCCCCCHHHEEHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA