Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is glcG [H]
Identifier: 91788915
GI number: 91788915
Start: 3220490
End: 3220909
Strand: Reverse
Name: glcG [H]
Synonym: Bpro_3055
Alternate gene names: 91788915
Gene position: 3220909-3220490 (Counterclockwise)
Preceding gene: 91788917
Following gene: 91788902
Centisome position: 61.94
GC content: 60.48
Gene sequence:
>420_bases ATGAAATCAAAAGCAGTTCTTGAATCCGTCGACGTGAAGGCCATCGCCGCCGCCGCCGAGGCTGAAGCCCTTAAAAACAA CTGGGCCGTGACCATTGCCATCGTCGATGACGGCGGCCACCTGCTGCACCTGCAGCGCCTTGATGGCGCGCCACCCATCT CTTCCCATATCGCACCGTCCAAGGCCAATACCGCCGCCATGGGGTGCCGCGAGAGCAAGGTTTATGAAGATGTCATCAAT GGTGGCCGCATGTCCTTCCTGTCAGCGCCTTACGTCCAGGGCATGCTCGAAGGTGGGGTGCCGATTGTCAAGGATGGGCA GTGCATCGGTGCTGTCGGTGTGAGCGGTGTGAAATCCAGCGAGGATGCGCAGATTGCGCGGGCCGGCATCGCGGCCATCG GCCTGTCAGAGAGATCCTGA
Upstream 100 bases:
>100_bases TGTGAGGGTTCTCCAAGCTAATTTTGGGGCAATTACAGCCCGGAAGGCGGCCAAACTTGCGTATGCTCGATGTTCTTGCC AACCCCCTTTCTGGAAAACC
Downstream 100 bases:
>100_bases TCCGGCGCTGACCTGAAGTGCCCGCCCCATGAAAAAGCCGACCCCGGGGTCGGCTTTTTTGTTCTCCAGGCCGCCCAGTG GTGTGGCGCTTGTGCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKSKAVLESVDVKAIAAAAEAEALKNNWAVTIAIVDDGGHLLHLQRLDGAPPISSHIAPSKANTAAMGCRESKVYEDVIN GGRMSFLSAPYVQGMLEGGVPIVKDGQCIGAVGVSGVKSSEDAQIARAGIAAIGLSERS
Sequences:
>Translated_139_residues MKSKAVLESVDVKAIAAAAEAEALKNNWAVTIAIVDDGGHLLHLQRLDGAPPISSHIAPSKANTAAMGCRESKVYEDVIN GGRMSFLSAPYVQGMLEGGVPIVKDGQCIGAVGVSGVKSSEDAQIARAGIAAIGLSERS >Mature_139_residues MKSKAVLESVDVKAIAAAAEAEALKNNWAVTIAIVDDGGHLLHLQRLDGAPPISSHIAPSKANTAAMGCRESKVYEDVIN GGRMSFLSAPYVQGMLEGGVPIVKDGQCIGAVGVSGVKSSEDAQIARAGIAAIGLSERS
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
Organism=Escherichia coli, GI1789349, Length=117, Percent_Identity=55.5555555555556, Blast_Score=133, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 14225; Mature: 14225
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKAVLESVDVKAIAAAAEAEALKNNWAVTIAIVDDGGHLLHLQRLDGAPPISSHIAPS CCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC KANTAAMGCRESKVYEDVINGGRMSFLSAPYVQGMLEGGVPIVKDGQCIGAVGVSGVKSS CCCHHHCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCEEECCCEEEECCCCCCCCC EDAQIARAGIAAIGLSERS CCHHHHHHHHHEECCCCCC >Mature Secondary Structure MKSKAVLESVDVKAIAAAAEAEALKNNWAVTIAIVDDGGHLLHLQRLDGAPPISSHIAPS CCCCHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCC KANTAAMGCRESKVYEDVINGGRMSFLSAPYVQGMLEGGVPIVKDGQCIGAVGVSGVKSS CCCHHHCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCEEECCCEEEECCCCCCCCC EDAQIARAGIAAIGLSERS CCHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]