Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788900
Identifier: 91788900
GI number: 91788900
Start: 3205287
End: 3205559
Strand: Reverse
Name: 91788900
Synonym: Bpro_3040
Alternate gene names: NA
Gene position: 3205559-3205287 (Counterclockwise)
Preceding gene: 91788901
Following gene: 91788899
Centisome position: 61.64
GC content: 58.61
Gene sequence:
>273_bases ATGCAGCTCACTGACAGCCAGCGCCGCTACTGGCGCAAGAACCTCGTCCTGACGGCCGCGCTTTTGCTGATCTGGGCGGT CGTGACGTTTGGCGTGAGCTACTTCGCTCGGGCGTTGAGCTTCAGGTTTTTCGGCTGGCCCTTCAGTTTCTGGATGGGAG CGCAGGGGGCTTTGCTGGTGTACTGCCTCATCATCGGGGTGTATGCGTGGTACATGAACCATCTGGATGTCAAGCATGGC GTGGCAGACCTCGCAGATGATGGAGATCACTGA
Upstream 100 bases:
>100_bases ATGGCCGCGCAATTGGAAAACGAGTTCGGCGTGCAAGGCAGGGCGGGCCAATTGGCACATGCGGTGCCGCCCCAAGGCGC CGCGATGGACATGGTGGGCA
Downstream 100 bases:
>100_bases GCCATGGCCGGATTTTTCGGGTCCCGTGAAGGGGAGCGACTCTCAAAGCAGCAGTTCAAGGCCCAGCTGAACCAGGTTTA CTGCTGGTACACGGTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MQLTDSQRRYWRKNLVLTAALLLIWAVVTFGVSYFARALSFRFFGWPFSFWMGAQGALLVYCLIIGVYAWYMNHLDVKHG VADLADDGDH
Sequences:
>Translated_90_residues MQLTDSQRRYWRKNLVLTAALLLIWAVVTFGVSYFARALSFRFFGWPFSFWMGAQGALLVYCLIIGVYAWYMNHLDVKHG VADLADDGDH >Mature_90_residues MQLTDSQRRYWRKNLVLTAALLLIWAVVTFGVSYFARALSFRFFGWPFSFWMGAQGALLVYCLIIGVYAWYMNHLDVKHG VADLADDGDH
Specific function: Unknown
COG id: COG4327
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10393; Mature: 10393
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTDSQRRYWRKNLVLTAALLLIWAVVTFGVSYFARALSFRFFGWPFSFWMGAQGALLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHH YCLIIGVYAWYMNHLDVKHGVADLADDGDH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQLTDSQRRYWRKNLVLTAALLLIWAVVTFGVSYFARALSFRFFGWPFSFWMGAQGALLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHH YCLIIGVYAWYMNHLDVKHGVADLADDGDH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA