Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yjcG [C]

Identifier: 91788899

GI number: 91788899

Start: 3203172

End: 3205283

Strand: Reverse

Name: yjcG [C]

Synonym: Bpro_3039

Alternate gene names: 91788899

Gene position: 3205283-3203172 (Counterclockwise)

Preceding gene: 91788900

Following gene: 91788897

Centisome position: 61.64

GC content: 61.98

Gene sequence:

>2112_bases
ATGGCCGGATTTTTCGGGTCCCGTGAAGGGGAGCGACTCTCAAAGCAGCAGTTCAAGGCCCAGCTGAACCAGGTTTACTG
CTGGTACACGGTGGGCCTGGTGCTGTTTGTGGCGGTGCTCGCCGGCCTGGAGCGCCTGGGAATGCCCCGGTTGTGGATAG
GCTCCACCTTTCTGATGGCCACCATTGGCCTGTATGCGGGTATCGGGATCATGAGCCGTACCACTGACGCGGCCGAATAT
TACGTGGCGGGCCGCCGCGTCCCGGCGGTCTACAACGGCATGGCTACCGGGGCTGACTGGATGTCGGCGGCATCTTTTAT
CGGCCTGGCGGGAACGCTGTACCTCACGGGTTACAGCGGTTTGGCTTTCATCATGGGCTGGACGGGCGGCTATTGCCTGG
TCGCGCTGGTGCTGGCGCCTTACCTTCGCAAGTTTGGCCAGTTCACCATCCCGGATTTCCTGGGCGAGCGCTACGGTGGA
AGCCTGCCCAGGTTCATCGGGGTGATAGCCGCCATCCTGTGTTCCTTTACTTACCTGGTGGCCCAGATTTATGGTGTCGG
CCTGATCACGTCCTATCTCACGGGTATCGCGTTCGAGCTCGGGATTTTCCTCGGGCTGGGCGGTATTTTGGTGTGCTCAT
TCCTGGGTGGAATGCGCGCCGTGACCTGGACCCAGGTGGCCCAATACATCATTTTGGTCGTGGCTTACCTGATTCCGGTG
ATCTGGCTGTCGGCCAAGCAAACCGGCGTACCGGTGCCGCAACTGGTTTACGGCTATCAGCTGGAAAAGGTCACCGCCAA
GGAAAAGCAGCTGGCCAATGATCCTGGGGAACAGCAGGTGCGGGCGCTCTTCCGGCAGCGATCGGAGGCGCTGGCCAACA
AGATCGAGGATCCCGCGGCGTCATTGACCGCCGACCGGCTGGATGCCAGCCGGAAGATGGAGGAATTGAAGAGTGGTAAC
GCCTCCGTTGCGCAGGTGTCTGCAGCGGCGAGGGCGCTGGCGGCAATGCCCAGGAACGAGGCGGCCGCGGTCCGCAGCTG
GTCGGCCGCCAAAGCCACTGCGGACATCAAGAGCCAGCCGCTCAACGGCATGCCGCCCCACGCGGCCCAGTTTTCCGGTG
ACCCGGACGGCACGCCAAAAGAAAAAGTGCTTTACGACACGTCGCGCCGGAATTTCCTGGCGCTGGTCTTTTGTCTCATG
GTGGGTACGGCCGCCTTGCCGCACATCCTGATGCGCTACTACACCGTCCCCAGCGTGCGGGAGGCGCGCCAGTCGGTCAC
CTGGTCGCTGTTTTTTATCTGCCTGCTGTACTTCACGGCGCCGGCCCTGGCCGTGCTGGTGAAATATGAAATTTTCACCG
TGCTGGTGGGCATGCCGTTTGACCATCTGCCTGCCTGGGTCAACACCTGGAGCAGGGTGGACCCATCGCTGCTGTCGGTC
ACCGATGTCAACAAGGACAACATCCTGCAACTCAATGAAATGACGGTAGGCGGCGACGTCATCGTGCTGCTCACTCCTGA
GCTTGCAGGGCTGCCTTACGTTATTTCAGCGCTGGTGGCGGCCGGTGGTCTGGCGGCCGCGCTCTCCACCGCAGACGGGC
TGCTGCTGACGATTGCCAATGCGCTGGGGCATGACCTGTATTACAAGATGATCGACCCCAACGCCTCGACGGTCAGCCGG
GTGACGGTGTCCAAGATTCTGCTGCTCGTCGTGGCCCTGACGGCGGCCTATGTGGCGGCGCAAAAACCGGCCGACATCCT
GTTTCTTGTGTCGGCGGCTTTTTCCTTTGCGGCGGCCTCGTTTTTCCCGGCGCTGAGCCTGGGCATTTTCTGGAAACGCG
CGACCGGTATTGCGGCGGTGCTGGGCATGATGGCGGGCCTGGGCGTGACTTCCTTCTACATGCTGACCACCCAGCCGTGG
CTGCGGGAGGCCTTCGGCGTCACCTCGCCCATCCAGCTCTGGTGGGGGATCGAGCCCATTTCTGCAGGGCTGTTTGGCGT
CCCGGTCGGGTTTGCCGTGATCGTGCTGGTCAGCCTGGTGACCCGTCCCCCTCCCCAGAAAGCCTGCGATCTGGTGGACC
ATGTGCGTTATCCGGACCTGAAAAGCCTTTAA

Upstream 100 bases:

>100_bases
GGTGTACTGCCTCATCATCGGGGTGTATGCGTGGTACATGAACCATCTGGATGTCAAGCATGGCGTGGCAGACCTCGCAG
ATGATGGAGATCACTGAGCC

Downstream 100 bases:

>100_bases
AAAGCCTTGAACGGCCCTTTGAAAGCGCCCTTGGCAGGACCTCGAACACCCGGATAGTATTTTCCAATTCAGGTATGAGC
CTGAGCGAAGCCGGATAGAG

Product: Na+/solute symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 702

Protein sequence:

>703_residues
MAGFFGSREGERLSKQQFKAQLNQVYCWYTVGLVLFVAVLAGLERLGMPRLWIGSTFLMATIGLYAGIGIMSRTTDAAEY
YVAGRRVPAVYNGMATGADWMSAASFIGLAGTLYLTGYSGLAFIMGWTGGYCLVALVLAPYLRKFGQFTIPDFLGERYGG
SLPRFIGVIAAILCSFTYLVAQIYGVGLITSYLTGIAFELGIFLGLGGILVCSFLGGMRAVTWTQVAQYIILVVAYLIPV
IWLSAKQTGVPVPQLVYGYQLEKVTAKEKQLANDPGEQQVRALFRQRSEALANKIEDPAASLTADRLDASRKMEELKSGN
ASVAQVSAAARALAAMPRNEAAAVRSWSAAKATADIKSQPLNGMPPHAAQFSGDPDGTPKEKVLYDTSRRNFLALVFCLM
VGTAALPHILMRYYTVPSVREARQSVTWSLFFICLLYFTAPALAVLVKYEIFTVLVGMPFDHLPAWVNTWSRVDPSLLSV
TDVNKDNILQLNEMTVGGDVIVLLTPELAGLPYVISALVAAGGLAAALSTADGLLLTIANALGHDLYYKMIDPNASTVSR
VTVSKILLLVVALTAAYVAAQKPADILFLVSAAFSFAAASFFPALSLGIFWKRATGIAAVLGMMAGLGVTSFYMLTTQPW
LREAFGVTSPIQLWWGIEPISAGLFGVPVGFAVIVLVSLVTRPPPQKACDLVDHVRYPDLKSL

Sequences:

>Translated_703_residues
MAGFFGSREGERLSKQQFKAQLNQVYCWYTVGLVLFVAVLAGLERLGMPRLWIGSTFLMATIGLYAGIGIMSRTTDAAEY
YVAGRRVPAVYNGMATGADWMSAASFIGLAGTLYLTGYSGLAFIMGWTGGYCLVALVLAPYLRKFGQFTIPDFLGERYGG
SLPRFIGVIAAILCSFTYLVAQIYGVGLITSYLTGIAFELGIFLGLGGILVCSFLGGMRAVTWTQVAQYIILVVAYLIPV
IWLSAKQTGVPVPQLVYGYQLEKVTAKEKQLANDPGEQQVRALFRQRSEALANKIEDPAASLTADRLDASRKMEELKSGN
ASVAQVSAAARALAAMPRNEAAAVRSWSAAKATADIKSQPLNGMPPHAAQFSGDPDGTPKEKVLYDTSRRNFLALVFCLM
VGTAALPHILMRYYTVPSVREARQSVTWSLFFICLLYFTAPALAVLVKYEIFTVLVGMPFDHLPAWVNTWSRVDPSLLSV
TDVNKDNILQLNEMTVGGDVIVLLTPELAGLPYVISALVAAGGLAAALSTADGLLLTIANALGHDLYYKMIDPNASTVSR
VTVSKILLLVVALTAAYVAAQKPADILFLVSAAFSFAAASFFPALSLGIFWKRATGIAAVLGMMAGLGVTSFYMLTTQPW
LREAFGVTSPIQLWWGIEPISAGLFGVPVGFAVIVLVSLVTRPPPQKACDLVDHVRYPDLKSL
>Mature_702_residues
AGFFGSREGERLSKQQFKAQLNQVYCWYTVGLVLFVAVLAGLERLGMPRLWIGSTFLMATIGLYAGIGIMSRTTDAAEYY
VAGRRVPAVYNGMATGADWMSAASFIGLAGTLYLTGYSGLAFIMGWTGGYCLVALVLAPYLRKFGQFTIPDFLGERYGGS
LPRFIGVIAAILCSFTYLVAQIYGVGLITSYLTGIAFELGIFLGLGGILVCSFLGGMRAVTWTQVAQYIILVVAYLIPVI
WLSAKQTGVPVPQLVYGYQLEKVTAKEKQLANDPGEQQVRALFRQRSEALANKIEDPAASLTADRLDASRKMEELKSGNA
SVAQVSAAARALAAMPRNEAAAVRSWSAAKATADIKSQPLNGMPPHAAQFSGDPDGTPKEKVLYDTSRRNFLALVFCLMV
GTAALPHILMRYYTVPSVREARQSVTWSLFFICLLYFTAPALAVLVKYEIFTVLVGMPFDHLPAWVNTWSRVDPSLLSVT
DVNKDNILQLNEMTVGGDVIVLLTPELAGLPYVISALVAAGGLAAALSTADGLLLTIANALGHDLYYKMIDPNASTVSRV
TVSKILLLVVALTAAYVAAQKPADILFLVSAAFSFAAASFFPALSLGIFWKRATGIAAVLGMMAGLGVTSFYMLTTQPWL
REAFGVTSPIQLWWGIEPISAGLFGVPVGFAVIVLVSLVTRPPPQKACDLVDHVRYPDLKSL

Specific function: Unknown

COG id: COG4147

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI1790503, Length=164, Percent_Identity=29.8780487804878, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR019899 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 75695; Mature: 75563

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00018 EF_HAND_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AGFFGSREGERLSKQQFKAQLNQVYCWYTVGLVLFVAVLAGLERLGMPRLWIGSTFLMA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TIGLYAGIGIMSRTTDAAEYYVAGRRVPAVYNGMATGADWMSAASFIGLAGTLYLTGYSG
HHHHHHCCHHHHCCCHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCH
LAFIMGWTGGYCLVALVLAPYLRKFGQFTIPDFLGERYGGSLPRFIGVIAAILCSFTYLV
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AQIYGVGLITSYLTGIAFELGIFLGLGGILVCSFLGGMRAVTWTQVAQYIILVVAYLIPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IWLSAKQTGVPVPQLVYGYQLEKVTAKEKQLANDPGEQQVRALFRQRSEALANKIEDPAA
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
SLTADRLDASRKMEELKSGNASVAQVSAAARALAAMPRNEAAAVRSWSAAKATADIKSQP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCC
LNGMPPHAAQFSGDPDGTPKEKVLYDTSRRNFLALVFCLMVGTAALPHILMRYYTVPSVR
CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EARQSVTWSLFFICLLYFTAPALAVLVKYEIFTVLVGMPFDHLPAWVNTWSRVDPSLLSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCEEE
TDVNKDNILQLNEMTVGGDVIVLLTPELAGLPYVISALVAAGGLAAALSTADGLLLTIAN
EECCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALGHDLYYKMIDPNASTVSRVTVSKILLLVVALTAAYVAAQKPADILFLVSAAFSFAAAS
HHCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FFPALSLGIFWKRATGIAAVLGMMAGLGVTSFYMLTTQPWLREAFGVTSPIQLWWGIEPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCCHH
SAGLFGVPVGFAVIVLVSLVTRPPPQKACDLVDHVRYPDLKSL
HCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1356967 [H]