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The map label for this gene is yfdE [H]

Identifier: 91788884

GI number: 91788884

Start: 3190352

End: 3191602

Strand: Reverse

Name: yfdE [H]

Synonym: Bpro_3024

Alternate gene names: 91788884

Gene position: 3191602-3190352 (Counterclockwise)

Preceding gene: 91788888

Following gene: 91788883

Centisome position: 61.37

GC content: 64.19

Gene sequence:

>1251_bases
ATGGGAGACACTTTCGCTTCGTTTGTCTGTTTTTACTGCTCTTTCTGTTCTGGATATTCCATGCCTCACCTGCCAGCCTC
TTCCGCACTCCAGCGCTTTCGCGTGGTGGATCTCACCCAGGTCCGGGCCGGCCCGACGGCCTGCCGCCAGCTGGCCGATT
GGGGCGCCGACGTCATCCAGGTCCAGATGCCCGAGCACATGCGGGGCGATGACACGCTTGGCGGGCAGGAAGGCTCCGAC
TACCAGTACACCCACCGCAACAAGCGCTCGATCACCCTCAACCTGAAAGAGGAGGAGGGCATCAGCGTGCTCAAGCGTCT
GATTGGCGGGGCCGACGTGGTGGTGGAGAACTTCCGGCCTGACGTGAAGTTCCGCCTCGGCATCGACTACGAAACCCTGC
GCGTCGACAACCCGCGCCTGGTGTACGCCAGCATCTCCGGCTTTGGCCAGTCGGGCCCCCTGGCCGCCCGCCCCGGTTTT
GACCAGATTGCGCAAGGCATGGGCGGCCTGATGTCGGTGACCGGCCTGGCTGAGCAGGGGCCGATGCGCGTGGGCATTCC
CATCGCAGACCTGTGCGCCGGCATTTTTGCGGCCCAGGGCATCCTGGTGGCGCTGCTGGAGCGCGAAACCTCGGGCAAGG
GCCAGTGGCTGCACACGTCCTTGCTGGAGTCCATGGTCTACATGATGGACTTCCAGACCTCGCGCTGGCTGATCGACGGC
GAAGTCGCCACCCAGGCCGGCAACTTTCACCCCACCAGCATTCCGACCGGGGTGTACAAGGCGCGCGACGGTTACATGAA
CATCGCGGTGTTCGGCTCCAGGATATGGGAGCGCTTTTGCGAGATCCTGGGCGCGCCCCAATGGGTCAGCGACGAGCGCT
ACAAGGACAAGATGGGCCGCTCGGTCAACCGCGATTCGCTCAACGCCGAAATCAACCGGCTGCTGGCGGCGCAGGACCGC
GCCTACTGGATCGAGCGCCTGAATGTGGGCGGCGTGGCCTGCGGCTTGATCAACAGTATGCAGGAGGCCTTTGAGGAGCC
GCAGATCAAGCACCTCAACATGGTCAAGGACGTGGTGTCTGCCCATCTGGGCGCCCAGCGCCTGGTGGGCCAGCCCATGC
AGCTGGAGCGCACGCCCAGCACCATCGCCCGTGCCGCGCCGCGCCGTGGCGAGCACACCGAGGAAATCCTGACCGAATTG
GGTTTAAGCGCCGGCGATCTGGCGCGCATGAAATCAACTGGAGTGTATTGA

Upstream 100 bases:

>100_bases
CTTCCGGTGCAGAGATGGTACCTGAAAAATATATTTTCAGAAGACGAAACAGGCATAAGTGTTCTCACTTATTAAAAAAG
TGTTGACACTTTATCTTGGT

Downstream 100 bases:

>100_bases
TGTCGACCGTGAGTTATGACTCCCCCACCGAACGCGTGCAGACCTGGCTGGACGCCTCCACGCTGCATATCCGCTTTAAC
AATCCGGCCCGCCACAACGC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MGDTFASFVCFYCSFCSGYSMPHLPASSALQRFRVVDLTQVRAGPTACRQLADWGADVIQVQMPEHMRGDDTLGGQEGSD
YQYTHRNKRSITLNLKEEEGISVLKRLIGGADVVVENFRPDVKFRLGIDYETLRVDNPRLVYASISGFGQSGPLAARPGF
DQIAQGMGGLMSVTGLAEQGPMRVGIPIADLCAGIFAAQGILVALLERETSGKGQWLHTSLLESMVYMMDFQTSRWLIDG
EVATQAGNFHPTSIPTGVYKARDGYMNIAVFGSRIWERFCEILGAPQWVSDERYKDKMGRSVNRDSLNAEINRLLAAQDR
AYWIERLNVGGVACGLINSMQEAFEEPQIKHLNMVKDVVSAHLGAQRLVGQPMQLERTPSTIARAAPRRGEHTEEILTEL
GLSAGDLARMKSTGVY

Sequences:

>Translated_416_residues
MGDTFASFVCFYCSFCSGYSMPHLPASSALQRFRVVDLTQVRAGPTACRQLADWGADVIQVQMPEHMRGDDTLGGQEGSD
YQYTHRNKRSITLNLKEEEGISVLKRLIGGADVVVENFRPDVKFRLGIDYETLRVDNPRLVYASISGFGQSGPLAARPGF
DQIAQGMGGLMSVTGLAEQGPMRVGIPIADLCAGIFAAQGILVALLERETSGKGQWLHTSLLESMVYMMDFQTSRWLIDG
EVATQAGNFHPTSIPTGVYKARDGYMNIAVFGSRIWERFCEILGAPQWVSDERYKDKMGRSVNRDSLNAEINRLLAAQDR
AYWIERLNVGGVACGLINSMQEAFEEPQIKHLNMVKDVVSAHLGAQRLVGQPMQLERTPSTIARAAPRRGEHTEEILTEL
GLSAGDLARMKSTGVY
>Mature_415_residues
GDTFASFVCFYCSFCSGYSMPHLPASSALQRFRVVDLTQVRAGPTACRQLADWGADVIQVQMPEHMRGDDTLGGQEGSDY
QYTHRNKRSITLNLKEEEGISVLKRLIGGADVVVENFRPDVKFRLGIDYETLRVDNPRLVYASISGFGQSGPLAARPGFD
QIAQGMGGLMSVTGLAEQGPMRVGIPIADLCAGIFAAQGILVALLERETSGKGQWLHTSLLESMVYMMDFQTSRWLIDGE
VATQAGNFHPTSIPTGVYKARDGYMNIAVFGSRIWERFCEILGAPQWVSDERYKDKMGRSVNRDSLNAEINRLLAAQDRA
YWIERLNVGGVACGLINSMQEAFEEPQIKHLNMVKDVVSAHLGAQRLVGQPMQLERTPSTIARAAPRRGEHTEEILTELG
LSAGDLARMKSTGVY

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=377, Percent_Identity=32.0954907161804, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI300863124, Length=403, Percent_Identity=30.0248138957816, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI13376042, Length=403, Percent_Identity=27.0471464019851, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI300863126, Length=377, Percent_Identity=28.1167108753316, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI266456254, Length=395, Percent_Identity=28.8607594936709, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI42794625, Length=398, Percent_Identity=28.894472361809, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI266458393, Length=261, Percent_Identity=32.5670498084291, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI266458397, Length=206, Percent_Identity=36.4077669902913, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI266458395, Length=135, Percent_Identity=40.7407407407407, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI42822893, Length=135, Percent_Identity=40.7407407407407, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87082093, Length=374, Percent_Identity=32.620320855615, Blast_Score=203, Evalue=2e-53,
Organism=Escherichia coli, GI1788717, Length=414, Percent_Identity=29.2270531400966, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1786222, Length=406, Percent_Identity=27.0935960591133, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=205, Percent_Identity=28.780487804878, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115535051, Length=262, Percent_Identity=25.5725190839695, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24648431, Length=395, Percent_Identity=31.3924050632911, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24585488, Length=272, Percent_Identity=31.25, Blast_Score=110, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 45849; Mature: 45718

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDTFASFVCFYCSFCSGYSMPHLPASSALQRFRVVDLTQVRAGPTACRQLADWGADVIQ
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE
VQMPEHMRGDDTLGGQEGSDYQYTHRNKRSITLNLKEEEGISVLKRLIGGADVVVENFRP
EECCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHCCHHEEHHCCCC
DVKFRLGIDYETLRVDNPRLVYASISGFGQSGPLAARPGFDQIAQGMGGLMSVTGLAEQG
CEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCC
PMRVGIPIADLCAGIFAAQGILVALLERETSGKGQWLHTSLLESMVYMMDFQTSRWLIDG
CEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECC
EVATQAGNFHPTSIPTGVYKARDGYMNIAVFGSRIWERFCEILGAPQWVSDERYKDKMGR
HHHHCCCCCCCCCCCCCHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
SVNRDSLNAEINRLLAAQDRAYWIERLNVGGVACGLINSMQEAFEEPQIKHLNMVKDVVS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AHLGAQRLVGQPMQLERTPSTIARAAPRRGEHTEEILTELGLSAGDLARMKSTGVY
HHHCHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
GDTFASFVCFYCSFCSGYSMPHLPASSALQRFRVVDLTQVRAGPTACRQLADWGADVIQ
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE
VQMPEHMRGDDTLGGQEGSDYQYTHRNKRSITLNLKEEEGISVLKRLIGGADVVVENFRP
EECCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHCCHHEEHHCCCC
DVKFRLGIDYETLRVDNPRLVYASISGFGQSGPLAARPGFDQIAQGMGGLMSVTGLAEQG
CEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCC
PMRVGIPIADLCAGIFAAQGILVALLERETSGKGQWLHTSLLESMVYMMDFQTSRWLIDG
CEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECC
EVATQAGNFHPTSIPTGVYKARDGYMNIAVFGSRIWERFCEILGAPQWVSDERYKDKMGR
HHHHCCCCCCCCCCCCCHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
SVNRDSLNAEINRLLAAQDRAYWIERLNVGGVACGLINSMQEAFEEPQIKHLNMVKDVVS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AHLGAQRLVGQPMQLERTPSTIARAAPRRGEHTEEILTELGLSAGDLARMKSTGVY
HHHCHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]