Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is crt [H]
Identifier: 91788883
GI number: 91788883
Start: 3189543
End: 3190352
Strand: Reverse
Name: crt [H]
Synonym: Bpro_3023
Alternate gene names: 91788883
Gene position: 3190352-3189543 (Counterclockwise)
Preceding gene: 91788884
Following gene: 91788882
Centisome position: 61.35
GC content: 63.58
Gene sequence:
>810_bases ATGTCGACCGTGAGTTATGACTCCCCCACCGAACGCGTGCAGACCTGGCTGGACGCCTCCACGCTGCATATCCGCTTTAA CAATCCGGCCCGCCACAACGCGCTGTCGGTCGACATGTGGGAGGCCGTCCCGCCCTTGCTGGCACAGGCCGAAACCGACG ACCGGGTGCGTCTGGTGGTGTTCTCGGGCGCCGGCGAGAAAGCCTTTGTGTCGGGCGCCGACATCTCGCAATTTGAGGAC ATGCGTGCCGCCCGGGAAGCGGTGACCCGTTATGAGCACATGGCGGAAAACGCCCTGATGAGCATCCACAATTTCAGCAA GCCCACGCTGTCGTGCATCCGCGGCTTTTGCATCGGCGGCGGTGTGAATGTGGCGATCAGCTGCGACATCCGCATCGCCT CGACCGATTCGGTGTTTTCGATTCCCGCAGCCCGCTTGGGCCTGGGTTACCGCTACTCGGCCATGAAAAACCTGGTCGAC CTGATCGGCCCGGGTGCGGCCAAGGACCTGTTCTTCACCGCCCGCAAGATTGACGCCCACGAGGCCAAATCGCTGGGCCT GATCTCGCGCGCCTGCGCACCCGACGAGCTGCCTGCGCTGCTGGCGGAATACACCTCGGCGCTGGCCGCCAATGCGCCCC TGACCGTGCGCGCGGGCAAGGCCATCACGGCTGAAATCCTCAAGCCCTCACCCGAGCTGGACCTGGACCTGTGCCAGCGC CTGATTCGCGGCTGCTTTGACAGCGCCGACTATGCCGAGGGGCGCAAAGCCTTCATGGAAAAACGCAAACCGGCTTTTAC CGGGAAATAA
Upstream 100 bases:
>100_bases GTGCCGCGCCGCGCCGTGGCGAGCACACCGAGGAAATCCTGACCGAATTGGGTTTAAGCGCCGGCGATCTGGCGCGCATG AAATCAACTGGAGTGTATTG
Downstream 100 bases:
>100_bases CCGGCGCCTGGCCCGGCCACGCCGACACACCCACCCACACCGACACCGAAAGAGAGCAAGCGAATGCAGTCTTACTGGAT GCAGATGAACGCGGATCACG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSTVSYDSPTERVQTWLDASTLHIRFNNPARHNALSVDMWEAVPPLLAQAETDDRVRLVVFSGAGEKAFVSGADISQFED MRAAREAVTRYEHMAENALMSIHNFSKPTLSCIRGFCIGGGVNVAISCDIRIASTDSVFSIPAARLGLGYRYSAMKNLVD LIGPGAAKDLFFTARKIDAHEAKSLGLISRACAPDELPALLAEYTSALAANAPLTVRAGKAITAEILKPSPELDLDLCQR LIRGCFDSADYAEGRKAFMEKRKPAFTGK
Sequences:
>Translated_269_residues MSTVSYDSPTERVQTWLDASTLHIRFNNPARHNALSVDMWEAVPPLLAQAETDDRVRLVVFSGAGEKAFVSGADISQFED MRAAREAVTRYEHMAENALMSIHNFSKPTLSCIRGFCIGGGVNVAISCDIRIASTDSVFSIPAARLGLGYRYSAMKNLVD LIGPGAAKDLFFTARKIDAHEAKSLGLISRACAPDELPALLAEYTSALAANAPLTVRAGKAITAEILKPSPELDLDLCQR LIRGCFDSADYAEGRKAFMEKRKPAFTGK >Mature_268_residues STVSYDSPTERVQTWLDASTLHIRFNNPARHNALSVDMWEAVPPLLAQAETDDRVRLVVFSGAGEKAFVSGADISQFEDM RAAREAVTRYEHMAENALMSIHNFSKPTLSCIRGFCIGGGVNVAISCDIRIASTDSVFSIPAARLGLGYRYSAMKNLVDL IGPGAAKDLFFTARKIDAHEAKSLGLISRACAPDELPALLAEYTSALAANAPLTVRAGKAITAEILKPSPELDLDLCQRL IRGCFDSADYAEGRKAFMEKRKPAFTGK
Specific function: Unknown
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=251, Percent_Identity=27.0916334661355, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI70995211, Length=216, Percent_Identity=30.5555555555556, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI20127408, Length=174, Percent_Identity=30.4597701149425, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI37594469, Length=129, Percent_Identity=32.5581395348837, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI37594471, Length=129, Percent_Identity=32.5581395348837, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI31542718, Length=246, Percent_Identity=25.609756097561, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI68989263, Length=172, Percent_Identity=31.9767441860465, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4502327, Length=254, Percent_Identity=26.3779527559055, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87082183, Length=252, Percent_Identity=29.7619047619048, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI221142681, Length=271, Percent_Identity=26.1992619926199, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1787659, Length=254, Percent_Identity=27.1653543307087, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1788597, Length=247, Percent_Identity=25.9109311740891, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788682, Length=216, Percent_Identity=28.2407407407407, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1790281, Length=183, Percent_Identity=20.2185792349727, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787660, Length=261, Percent_Identity=24.904214559387, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25145438, Length=244, Percent_Identity=27.0491803278689, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17554946, Length=246, Percent_Identity=26.8292682926829, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17536985, Length=260, Percent_Identity=26.1538461538462, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17534483, Length=207, Percent_Identity=25.6038647342995, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17540714, Length=206, Percent_Identity=23.7864077669903, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17558304, Length=187, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25144276, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17508951, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17508953, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17560910, Length=186, Percent_Identity=25.2688172043011, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24653139, Length=281, Percent_Identity=28.8256227758007, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=26.6129032258064, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=26.6129032258064, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI19920382, Length=284, Percent_Identity=26.7605633802817, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=23.0769230769231, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921000, Length=197, Percent_Identity=28.9340101522843, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24654903, Length=177, Percent_Identity=25.4237288135593, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24583077, Length=197, Percent_Identity=28.9340101522843, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24583079, Length=197, Percent_Identity=28.9340101522843, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24650670, Length=188, Percent_Identity=26.063829787234, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI21357171, Length=191, Percent_Identity=25.6544502617801, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 29188; Mature: 29056
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVSYDSPTERVQTWLDASTLHIRFNNPARHNALSVDMWEAVPPLLAQAETDDRVRLVV CCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEEEEHHHHCCHHHHCCCCCCCEEEEE FSGAGEKAFVSGADISQFEDMRAAREAVTRYEHMAENALMSIHNFSKPTLSCIRGFCIGG EECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GVNVAISCDIRIASTDSVFSIPAARLGLGYRYSAMKNLVDLIGPGAAKDLFFTARKIDAH CCEEEEEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH EAKSLGLISRACAPDELPALLAEYTSALAANAPLTVRAGKAITAEILKPSPELDLDLCQR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCHHHHHH LIRGCFDSADYAEGRKAFMEKRKPAFTGK HHHHHCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STVSYDSPTERVQTWLDASTLHIRFNNPARHNALSVDMWEAVPPLLAQAETDDRVRLVV CCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCEEEEHHHHCCHHHHCCCCCCCEEEEE FSGAGEKAFVSGADISQFEDMRAAREAVTRYEHMAENALMSIHNFSKPTLSCIRGFCIGG EECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GVNVAISCDIRIASTDSVFSIPAARLGLGYRYSAMKNLVDLIGPGAAKDLFFTARKIDAH CCEEEEEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH EAKSLGLISRACAPDELPALLAEYTSALAANAPLTVRAGKAITAEILKPSPELDLDLCQR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCHHHHHH LIRGCFDSADYAEGRKAFMEKRKPAFTGK HHHHHCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]